Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pinus_20lambertiana_20[genbank_20GCA_5F001447015.2_202015-11-17]
4,253,097 sequences; 27,602,653,187 total letters
Query= NC_026430.1
Length=125767
Score E
Sequences producing significant alignments: (Bits) Value
seq562416 82.4 6e-11
seq25406 82.4 6e-11
>seq562416
Length=95391
Score = 82.4 bits (90), Expect = 6e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
||||| || ||||| || |||||||| ||||||||||| || |||| || |
Sbjct 18976 ATGCAGATATTTGTGAAGACATTGACAGGCAAGACCATCACACTGGAGGTTGAGAGCTCT 19035
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
||| || ||| | ||||| || ||| ||||| ||||| | || ||||||
Sbjct 19036 GATACTATTGATAATGTGAAGGCCAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAG 19095
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439
|| ||||| || | ||| ||||| ||| | || ||| ||| ||| |||||| |||
Sbjct 19096 CAGAGGCTCATCTTTGCCGGCAAGCAACTGGAGGATGGCCGAACCCTGGCCGATTATAAC 19155
Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTG 106472
|| || || ||||| || || ||| | || |||
Sbjct 19156 ATTCAGAAGGAATCCACCCTCCATCTTGTCTTG 19188
>seq25406
Length=689335
Score = 82.4 bits (90), Expect = 6e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 106257 AAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCC 106316
|| ||| | || || || || || ||||| |||||||||| ||| | ||| ||| |
Sbjct 108225 AAGATGTAGATCTTCGTAAAGACCTTGACAAGCAAGACCATAACCTTAGAAGTTGAAAGC 108284
Query 106317 GGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGAT 106376
||||| | | | | ||||| ||||| ||||||||||| | || ||
Sbjct 108285 AGCGATGTAATCGACAATGTGAAGGCCAAAATCTAGGACAAAGAAGGGATCCCACCCGAC 108344
Query 106377 CAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTAC 106436
|||||| | || || | |||||||||||| | |||||| ||| ||| ||||||
Sbjct 108345 CAACAATGTCTGATATTTGCGGGCAAACAGATGGAAGATAGCTGCACTCTGGCAGATTAC 108404
Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486
||||| || ||||| || || | ||| | ||| ||||| | || || ||
Sbjct 108405 AACATTCAGAAAGAGTCAACCTTGCATCTTGTACTGAGGCTTCGTGGGGG 108454
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381474998194976
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |