Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinus_20taeda_20[genbank_20GCA_5F000404065.3_202017-01-09] 1,760,464 sequences; 22,103,635,615 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq1218454 96.9 3e-15 >seq1218454 Length=178969 Score = 96.9 bits (106), Expect = 3e-15 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 19002 CAGTTTTACGTTGCAAACGGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATG 19061 |||||||| |||||||| || ||||| || || || | ||||| |||| | || ||| Sbjct 25317 CAGTTTTATGTTGCAAAAGGGGAATTGTCATGTCAGATGTACCAACGATCCTGTGACATG 25376 Query 19062 GGCCTTGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCAT 19121 |||||||| ||||| ||||||||||| |||||||||| | || | ||| | || ||| Sbjct 25377 GGCCTTGGCGTACCTTTCAACATTGCATCATATGCACTTTTGACTTGCATGATTGCCCAT 25436 Query 19122 GTT 19124 ||| Sbjct 25437 GTT 25439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 390932380004880