Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinus_20taeda_20[genbank_20GCA_5F000404065.3_202017-01-09] 1,760,464 sequences; 22,103,635,615 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq74577 98.7 8e-16 seq1521817 96.9 3e-15 seq1486149 91.5 1e-13 seq102530 91.5 1e-13 seq230752 89.7 4e-13 seq1684795 87.8 2e-12 seq1106782 87.8 2e-12 seq924054 87.8 2e-12 seq651746 87.8 2e-12 seq1588668 86.0 5e-12 seq728553 86.0 5e-12 seq407677 86.0 5e-12 seq1118728 84.2 2e-11 seq953416 84.2 2e-11 seq730927 84.2 2e-11 seq452168 84.2 2e-11 seq89475 84.2 2e-11 seq1532893 82.4 6e-11 seq790506 82.4 6e-11 >seq74577 Length=219802 Score = 98.7 bits (108), Expect = 8e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 |||||| || || ||||||| | || ||||| ||||| ||| ||| ||| | | Sbjct 102930 AATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACCATCACCTTGGAAGTCGAAAGCTC 102989 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 || || | | | || | ||| |||||| || || ||||| | || ||||| Sbjct 102990 TGACACAATTGACAATGTGAAGTCTAAAATTCAAGACAAGGAAGGGATTCCACCCGATCA 103049 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140 || || || |||||||| || |||||||| || ||| ||| | ||||||||||| Sbjct 103050 GCAGAGGCTGATCTTTGCTGGAAAACAACTCGAGGATGGACGCACTCTTGCCGATTACAA 103109 Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 29189 ||| ||||||||||| ||||||||| | || | || | |||||||| Sbjct 103110 TATCCAGAAGGAATCGACTCTTCACCTTGTTCTCCGTCTCAGAGGAGGG 103158 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 |||||| || || ||||||| | || ||||| ||||| ||| ||| ||| | | Sbjct 134609 AATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACCATCACCTTGGAAGTCGAAAGCTC 134668 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 || || | | | || | ||| |||||| || || ||||| | || ||||| Sbjct 134669 TGACACAATTGACAATGTGAAGTCTAAAATTCAAGACAAGGAAGGGATTCCACCCGATCA 134728 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140 || || || || ||||| || ||||| || || ||| ||| | ||||||||||| Sbjct 134729 GCAGAGGCTGATTTTTGCTGGAAAACAGCTCGAGGATGGACGCACTCTTGCCGATTACAA 134788 Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 29189 || ||||||||||| ||||||||| | || | || | |||||||| Sbjct 134789 CATCCAGAAGGAATCGACTCTTCACCTTGTTCTCCGTCTCAGAGGAGGG 134837 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || || ||||||| |||| || ||||| || || ||| || | || Sbjct 103615 ATGCAGATCTTTGTCAAAACCCTGACTGGAAAAACTATCACGCTTGAAGTTGAGAGCTCA 103674 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | | | ||| |||||| ||||| || || | || ||||| Sbjct 103675 GACACTATTGACAACGTCAAGGCCAAAATTCAAGATAAGGAGGGGATTCCTCCGGATCAG 103734 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || ||| | |||||||| || || ||||| |||||| || ||| | ||||| ||||| Sbjct 103735 CAGAGATTGATCTTTGCAGGGAAGCAACTTGAAGATGGCAGGACTCTAGCCGACTACAAC 103794 Query 29142 ATTCAGAAGGAATCTACTCTTCA 29164 ||||||||||||||||| || || Sbjct 103795 ATTCAGAAGGAATCTACGCTGCA 103817 >seq1521817 Length=342303 Score = 96.9 bits (106), Expect = 3e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 29076 GATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGAT 29135 ||||| || ||||| |||||||| || |||||||| |||||| | ||| | || ||| Sbjct 120366 GATCAGCAGAGACTGATCTTTGCTGGGAAACAACTTGAAGATGGAAGGACTCTTGCAGAT 120425 Query 29136 TACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 ||||||||||||||||||||||| |||||| | || | || || || || || Sbjct 120426 TACAATATTCAGAAGGAATCTACCCTTCACCTTGTTCTTCGGTTGCGTGGTGG 120478 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 |||||||| || | || |||||| || || | || ||||| || || ||||| ||| Sbjct 120573 GATAAAGAGGGAATTCCTCCAGATCAGCAGAGGTTGATATTTGCTGGGAAGCAACTTGAA 120632 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 ||| | |||| | || ||||||||||||||||||||||| ||||| ||| | || || Sbjct 120633 GATGGAAGAACTCTTGCAGATTACAATATTCAGAAGGAATCGACTCTCCACCTTGTTCTA 120692 Query 29175 CGATTACGAGGAGG 29188 || | ||||| || Sbjct 120693 CGGCTGCGAGGTGG 120706 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 || || ||||| | ||| ||||| |||||||| || ||||| || || || ||||| Sbjct 119655 GACAAGGAAGGCATTCCCCCTGATCAGCAAAGACTCATATTTGCTGGAAAGCAGCTGGAG 119714 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGT 29170 ||| || | || |||||||||||||| |||||||||||||||||| |||| Sbjct 119715 GATGGACGGACCCTTGCTGATTACAATATTCAAAAGGAATCTACTCTTCACCTGGT 119770 >seq1486149 Length=44583 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || || ||||||| |||| ||||| || || || ||| ||| | | Sbjct 26802 ATGCAGATCTTTGTCAAAACCCTGACCGGCAAGACAATCACTCTGGAAGTCGAAAGCTCT 26861 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | || | ||| |||||| || || ||||| | || ||||| Sbjct 26862 GATACAATTGACAATGTCAAGGCTAAAATTCAAGACAAGGAAGGGATTCCACCCGATCAG 26921 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || || |||||||| || |||||||| || ||| ||| | |||||||||||| Sbjct 26922 CAGAGGCTGATCTTTGCTGGGAAACAACTCGAGGATGGACGCACTCTCGCCGATTACAAT 26981 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 29189 || ||||||||||| ||||||||| | || | || | |||||||| Sbjct 26982 ATCCAGAAGGAATCGACTCTTCACCTTGTTCTCCGTCTCAGAGGAGGG 27029 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 29046 AAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAA 29105 |||||| || || |||||| | || |||||| || ||||| |||||||| || || Sbjct 27342 AAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAGCAGAGACTCATCTTTGCCGGGAAG 27401 Query 29106 CAACTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCAC 29165 || ||||| ||| | ||| |||| ||||| || |||||||||||||| || || ||| Sbjct 27402 CAGCTGGAGGATGGCCGAACCCTGGCGGATTATAACATTCAGAAGGAATCAACCCTCCAC 27461 Query 29166 ATGGTGTTACG 29176 | || || || Sbjct 27462 CTTGTCTTGCG 27472 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || || ||||||| | || ||||| |||||||| ||| ||| | | Sbjct 26574 ATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACCATTACTTTGGAAGTCGAAAGCTCT 26633 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | || | ||| |||||| || |||||||| | || || || Sbjct 26634 GACACAATTGACAATGTGAAGGCTAAAATTCAAGACAAAGAAGGAATTCCACCCGACCAG 26693 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || || |||||||| || ||||| || || || ||| | ||||||||||| Sbjct 26694 CAGAGGCTAATCTTTGCTGGAAAACAGCTCGAGGACGGACGCACTCTCGCCGATTACAAC 26753 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 29189 || ||||||||||| ||||||||| | || | || | |||||||| Sbjct 26754 ATCCAGAAGGAATCGACTCTTCACCTTGTCCTCCGTCTCAGAGGAGGG 26801 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || || ||||||| |||| ||||| || || || |||| || | || Sbjct 27030 ATGCAGATCTTTGTCAAAACCCTGACCGGCAAGACAATCACGCTCGAAGTCGAGAGCTCA 27089 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | | ||| || ||| |||||||| || | || |||||| Sbjct 27090 GACACTATTGATAACGTGAAGGCGAAGATTCAGGATAAAGAGGGGATTCCTCCGGATCAA 27149 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || ||| | |||||||| || |||||||| |||||| | ||| | ||||| ||||| Sbjct 27150 CAGAGATTGATCTTTGCAGGGAAACAACTTGAAGATGGGAGGACTCTAGCCGACTACAAC 27209 Query 29142 ATTCAGAAGGAATCTACTCTTCA 29164 ||||| ||||||||||| || || Sbjct 27210 ATTCAAAAGGAATCTACACTGCA 27232 >seq102530 Length=63980 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || || ||||||| |||| ||||| || || || ||| ||| | | Sbjct 3915 ATGCAGATCTTTGTCAAAACCCTGACCGGCAAGACAATCACTCTGGAAGTCGAAAGCTCT 3974 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | || | ||| |||||| || || ||||| | || ||||| Sbjct 3975 GATACAATTGACAATGTCAAGGCTAAAATTCAAGACAAGGAAGGGATTCCACCCGATCAG 4034 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || || |||||||| || |||||||| || ||| ||| | |||||||||||| Sbjct 4035 CAGAGGCTGATCTTTGCTGGGAAACAACTCGAGGATGGACGCACTCTCGCCGATTACAAT 4094 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 29189 || ||||||||||| ||||||||| | || | || | |||||||| Sbjct 4095 ATCCAGAAGGAATCGACTCTTCACCTTGTTCTCCGTCTCAGAGGAGGG 4142 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || || ||||||| | || ||||| |||||||| ||| ||| | | Sbjct 55966 ATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACCATTACTTTGGAAGTCGAAAGCTCT 56025 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | || | ||| |||||| || |||||||| | || || || Sbjct 56026 GACACAATTGACAATGTGAAGGCTAAAATTCAAGACAAAGAAGGGATTCCACCCGACCAG 56085 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || || |||||||| || ||||| ||||| || ||| | ||||||||||| Sbjct 56086 CAGAGGCTAATCTTTGCTGGAAAACAGCTGGAGGACGGACGCACTCTCGCCGATTACAAC 56145 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 29189 || ||||||||||| ||||||||| | || | || | |||||||| Sbjct 56146 ATCCAGAAGGAATCGACTCTTCACCTTGTCCTCCGTCTCAGAGGAGGG 56193 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || || ||||||| |||| ||||| || || || ||| ||| | | Sbjct 56194 ATGCAGATCTTTGTCAAAACCCTGACCGGCAAGACAATCACTCTGGAAGTCGAAAGCTCT 56253 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | || | ||| |||||| || || ||||| | || ||||| Sbjct 56254 GATACAATTGACAATGTCAAGGCTAAAATTCAAGACAAGGAAGGGATTCCACCCGATCAG 56313 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || || |||||||| || |||||||| || ||| ||| | ||||||||||| Sbjct 56314 CAGAGGCTGATCTTTGCTGGAAAACAACTCGAGGATGGACGCACTCTCGCCGATTACAAC 56373 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 29189 || ||||||||||| ||||||||| | || | || | |||||||| Sbjct 56374 ATCCAGAAGGAATCGACTCTTCACCTTGTTCTCCGTCTCAGAGGAGGG 56421 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || || ||||||| | || ||||| |||||||| ||| ||| | | Sbjct 3687 ATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACCATTACTTTGGAAGTCGAAAGCTCT 3746 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | || | ||| |||||| || |||||||| | || || || Sbjct 3747 GACACAATTGACAATGTGAAGGCTAAAATTCAAGACAAAGAAGGAATTCCACCCGACCAG 3806 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || || |||||||| || ||||| || || || ||| | ||||||||||| Sbjct 3807 CAGAGGCTAATCTTTGCTGGAAAACAGCTCGAGGACGGACGCACTCTCGCCGATTACAAC 3866 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 29189 || ||||||||||| ||||||||| | || | || | |||||||| Sbjct 3867 ATCCAGAAGGAATCGACTCTTCACCTTGTCCTCCGTCTCAGAGGAGGG 3914 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || || ||||||| |||| ||||| || || || |||| || | || Sbjct 56422 ATGCAGATCTTTGTCAAAACCCTGACCGGCAAGACAATCACGCTCGAAGTCGAGAGCTCA 56481 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | | ||| || ||| |||||||| || | || |||||| Sbjct 56482 GACACTATTGATAACGTGAAGGCGAAGATTCAGGATAAAGAGGGGATTCCTCCGGATCAA 56541 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || ||| | |||||||| || |||||||| |||||| | ||| | ||||| ||||| Sbjct 56542 CAGAGATTGATCTTTGCAGGGAAACAACTTGAAGATGGGAGGACTCTCGCCGACTACAAC 56601 Query 29142 ATTCAGAAGGAATCTACTCTTCA 29164 ||||| ||||||||||| || || Sbjct 56602 ATTCAAAAGGAATCTACACTGCA 56624 >seq230752 Length=20368 Score = 89.7 bits (98), Expect = 4e-13 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 || || ||||| | ||| || || || || ||||||||||| ||||| ||||| ||| Sbjct 12277 GACAAGGAAGGCATACCCCCTGACCAGCAGAGGCTTATCTTTGCCGGCAAGCAACTTGAA 12218 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTG 29171 ||| | ||| |||| ||||||||||||||||||||||| || || ||| | ||| Sbjct 12217 GATGGCCGGACTTTGGCTGATTACAATATTCAGAAGGAATCGACCCTGCACCTTGTG 12161 >seq1684795 Length=260646 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || || ||||||| |||| || ||||| || || ||| ||| | || Sbjct 98677 ATGCAGATCTTTGTCAAAACCCTGACCGGAAAAACAATCACGCTTGAAGTTGAAAGCTCA 98736 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | | | ||| |||||| ||||| || || | || ||||| Sbjct 98737 GACACTATTGACAACGTCAAGGCCAAAATTCAAGATAAGGAGGGGATTCCTCCGGATCAG 98796 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || ||| | ||||||||||| || ||||| |||||| | ||| ||||||| ||||| Sbjct 98797 CAGAGATTGATCTTTGCGGGTAAGCAACTTGAAGATGGGAGGACTCTGGCCGACTACAAC 98856 Query 29142 ATTCAGAAGGAATCTACTCTTCA 29164 ||||| ||||||||||| || || Sbjct 98857 ATTCAAAAGGAATCTACGCTGCA 98879 >seq1106782 Length=21075 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || || ||||||| | || ||||| |||||||| ||| ||| | | Sbjct 3686 ATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACCATTACTTTGGAAGTCGAAAGCTCT 3745 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | || | ||| |||||| || |||||||| | || || || Sbjct 3746 GACACAATTGACAATGTGAAGGCTAAAATTCAAGACAAAGAAGGGATTCCACCCGACCAG 3805 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || || |||||||| || ||||| ||||| || ||| | ||||||||||| Sbjct 3806 CAGAGGCTAATCTTTGCTGGAAAACAGCTGGAGGACGGACGCACTCTCGCCGATTACAAC 3865 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 29189 || ||||||||||| ||||||||| | || | || | |||||||| Sbjct 3866 ATCCAGAAGGAATCGACTCTTCACCTTGTCCTCCGTCTCAGAGGAGGG 3913 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || || ||||||| |||| ||||| || || || ||| ||| | | Sbjct 3914 ATGCAGATCTTTGTCAAAACCCTGACCGGCAAGACAATCACTCTGGAAGTCGAAAGCTCT 3973 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | || | ||| |||||| || || ||||| | || ||||| Sbjct 3974 GATACAATTGACAATGTCAAGGCTAAAATTCAAGACAAGGAAGGGATTCCACCCGATCAG 4033 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || || |||||||| || |||||||| || ||| ||| | ||||||||||| Sbjct 4034 CAGAGGCTGATCTTTGCTGGAAAACAACTCGAGGATGGACGCACTCTCGCCGATTACAAC 4093 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 29189 || ||||||||||| ||||||||| | || | || | |||||||| Sbjct 4094 ATCCAGAAGGAATCGACTCTTCACCTTGTTCTCCGTCTCAGAGGAGGG 4141 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 29046 AAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAA 29105 |||||| || || |||||| | || |||||| || ||||| |||||||| || || Sbjct 4454 AAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAGCAGAGACTCATCTTTGCCGGGAAG 4513 Query 29106 CAACTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCAC 29165 || ||||| ||| | ||| |||| ||||| || |||||||||||||| || || ||| Sbjct 4514 CAGCTGGAGGATGGCCGAACCCTGGCGGATTATAACATTCAGAAGGAATCAACCCTCCAC 4573 Query 29166 ATGGTGTTACG 29176 | || || || Sbjct 4574 CTTGTCTTGCG 4584 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || || ||||||| |||| ||||| || || || |||| || | || Sbjct 4142 ATGCAGATCTTTGTCAAAACCCTGACCGGCAAGACAATCACGCTCGAAGTCGAGAGCTCA 4201 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | | ||| || ||| |||||||| || | || |||||| Sbjct 4202 GACACTATTGATAACGTGAAGGCGAAGATTCAGGATAAAGAGGGGATTCCTCCGGATCAA 4261 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || ||| | |||||||| || |||||||| |||||| | ||| | ||||| ||||| Sbjct 4262 CAGAGATTGATCTTTGCAGGGAAACAACTTGAAGATGGGAGGACTCTAGCCGACTACAAC 4321 Query 29142 ATTCAGAAGGAATCTACTCTTCA 29164 ||||| ||||||||||| || || Sbjct 4322 ATTCAAAAGGAATCTACACTGCA 4344 >seq924054 Length=140678 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 || |||||||| ||| ||||||| | || ||||| ||||| || ||| || | Sbjct 14550 AAGATGCAAATCTTCGTCAAAACTCTTACCGGCAAGACCATCACTCTTGAAGTCGAGAGC 14609 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || || | | | || | ||| |||||| ||||| ||||| | ||| || Sbjct 14610 TCTGACACCATTGACAATGTAAAGGCAAAAATCCAGGATAAGGAAGGCATTCCCCCGGAC 14669 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 ||||| | || || ||||| || || || ||||||||| | ||| | ||||||||| Sbjct 14670 CAACAGCGTCTGATATTTGCTGGAAAGCAGCTGGAAGATGGCCGAACCCTTGCCGATTAC 14729 Query 29139 AATATTCAGAAGGAATCTACTCTTCA 29164 ||||| ||||||||||| || || || Sbjct 14730 AATATCCAGAAGGAATCCACGCTGCA 14755 >seq651746 Length=18649 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| || | ||||| |||| ||||| ||||| ||| |||| || | | Sbjct 12769 ATGCAAATCTTTGTGAAAACCCTGACCGGCAAGACCATCACCCTCGAAGTTGAGAGCTCC 12828 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | || || ||| || || ||||| | ||| ||||||| Sbjct 12829 GACACTATTGATAATGTGAAAGCCAAGATTCAGGACAAGGAAGGGATTCCCCTAGATCAG 12888 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || ||| | |||||||| || || ||||| |||||| | ||| |||| |||||||| Sbjct 12889 CAGAGATTGATCTTTGCTGGGAAGCAACTTGAAGATGGGAGGACTCTGGCGGATTACAAC 12948 Query 29142 ATTCAGAAGGAATCTACTCTTCA 29164 ||||||||||| || || || || Sbjct 12949 ATTCAGAAGGAGTCAACCCTGCA 12971 >seq1588668 Length=25065 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| || | ||||| | || || ||||||||||| ||| |||| | | Sbjct 17267 ATGCAAATCTTTGTGAAAACCCTTACAGGTAAAACCATTACTCTGGAAGTGGAAAGCTCG 17208 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | || | ||| || || || || || || | || || || Sbjct 17207 GACACCATTGACAATGTGAAGGCTAAGATCCAGGACAAGGAGGGAATTCCACCTGACCAG 17148 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || | |||||||| || || || ||||||||| ||| |||||||||||||| Sbjct 17147 CAGAGGTTGATCTTTGCCGGTAAGCAGCTGGAAGATGGTCGTACTCTGGCCGATTACAAT 17088 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTG 29171 |||||||||||||| || |||||| ||||| Sbjct 17087 ATTCAGAAGGAATCGACCCTTCACCTGGTG 17058 >seq728553 Length=135983 Score = 86.0 bits (94), Expect = 5e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 || || ||||| | ||| || || || || ||||||||||| || || ||||| ||| Sbjct 38790 GACAAGGAAGGCATACCCCCTGACCAGCAGAGGCTTATCTTTGCCGGTAAGCAACTTGAA 38849 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTG 29171 ||| | ||| |||| ||||||||||||||||||||||| || || ||| | ||| Sbjct 38850 GATGGCCGGACTTTGGCTGATTACAATATTCAGAAGGAATCGACCCTGCACCTTGTG 38906 >seq407677 Length=102824 Score = 86.0 bits (94), Expect = 5e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 || || |||||| | || |||||| || ||||| |||||||| || ||||| ||||| Sbjct 68686 GACAAGGAAGGTATTCCTCCAGATCAGCAGAGACTCATCTTTGCCGGGAAACAGCTGGAG 68627 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 ||| | ||| |||| ||||| || |||||||||||||| || || ||| | || || Sbjct 68626 GATGGCCGAACCCTGGCGGATTATAACATTCAGAAGGAATCAACCCTCCACCTTGTCTTG 68567 Query 29175 CG 29176 || Sbjct 68566 CG 68565 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || || ||||||| |||| || || || || || ||| ||| | | Sbjct 69235 ATGCAGATCTTTGTCAAAACCCTGACCGGAAAGACAATCACTCTTGAAGTCGAAAGCTCT 69176 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | || | ||| |||||| || || ||||| | || ||||| Sbjct 69175 GACACAATTGACAATGTCAAGGCTAAAATTCAAGACAAGGAAGGGATTCCTCCCGATCAG 69116 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || || |||||||| || ||||| || || ||| ||| | ||||||||||| Sbjct 69115 CAGAGGCTGATCTTTGCTGGAAAACAGCTCGAGGATGGACGCACTCTCGCCGATTACAAC 69056 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 29189 || ||||||||||| ||||||||| | || | ||| | |||||||| Sbjct 69055 ATCCAGAAGGAATCGACTCTTCACCTTGTTCTCCGACTCAGAGGAGGG 69008 >seq1118728 Length=17451 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 |||||| || || ||||||| | || ||||| ||||| ||| ||| ||| | | Sbjct 1564 AATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACCATCACCTTGGAAGTCGAAAGCTC 1623 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 || || | | | || | ||| |||||| || || ||||| | || ||||| Sbjct 1624 TGACACAATTGACAATGTGAAGTCTAAAATTCAAGACAAGGAAGGGATTCCACCCGATCA 1683 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140 || || || || ||||| || ||||| || || ||| ||| | ||||||||||| Sbjct 1684 GCAGAGGCTGATTTTTGCTGGAAAACAGCTCGAGGATGGACGCACTCTTGCCGATTACAA 1743 Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 29189 || ||||||||||| ||||||||| | || | || | |||||||| Sbjct 1744 CATCCAGAAGGAATCGACTCTTCACCTTGTTCTCCGTCTCAGAGGAGGG 1792 >seq953416 Length=62966 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 ||||| || ||| | || || || || | ||||||||||| || ||||| || ||| Sbjct 23890 GATAAGGAGGGTATTCCTCCTGACCAGCAGTGTCTTATCTTTGCCGGAAAACAGCTCGAA 23831 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCAC 29165 ||| |||| | ||||| ||||||||||||||||||||||| |||||| Sbjct 23830 GATGGTCGAACTCTCGCCGAATACAATATTCAGAAGGAATCTACCCTTCAC 23780 >seq730927 Length=2450 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 |||||| || || ||||||| | || ||||| ||||| ||| ||| ||| | | Sbjct 1395 AATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACCATCACCTTGGAAGTCGAAAGCTC 1336 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 || || | | | || | ||| |||||| || || ||||| | || ||||| Sbjct 1335 TGACACAATTGACAATGTGAAGTCTAAAATTCAAGACAAGGAAGGGATTCCACCCGATCA 1276 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140 || || || || ||||| || ||||| || || ||| ||| | ||||||||||| Sbjct 1275 GCAGAGGCTGATTTTTGCTGGAAAACAGCTCGAGGATGGACGCACTCTTGCCGATTACAA 1216 Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 29189 || ||||||||||| ||||||||| | || | || | |||||||| Sbjct 1215 CATCCAGAAGGAATCGACTCTTCACCTTGTTCTCCGTCTCAGAGGAGGG 1167 >seq452168 Length=246641 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 || |||||||| | ||| |||||||| || ||||||||||| || || || || || Sbjct 89944 GACAAAGAAGGAATTCCCCCCGATCAACAGAGGCTTATCTTTGCTGGTAAGCAGCTAGAG 90003 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGT 29170 ||| | |||| | || || ||||| || |||||||||||||| || ||| |||| Sbjct 90004 GATGGCCGAACTCTAGCGGACTACAACATCCAGAAGGAATCTACCCTGCACCTGGT 90059 >seq89475 Length=207895 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 ||||| || ||| | || || || || | ||||||||||| || ||||| || ||| Sbjct 199794 GATAAGGAGGGTATTCCTCCTGACCAGCAGTGTCTTATCTTTGCCGGAAAACAGCTCGAA 199735 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCAC 29165 ||| |||| | ||||| ||||||||||||||||||||||| |||||| Sbjct 199734 GATGGTCGAACTCTCGCCGAATACAATATTCAGAAGGAATCTACCCTTCAC 199684 >seq1532893 Length=286854 Score = 82.4 bits (90), Expect = 6e-11 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 29076 GATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGAT 29135 ||||| || || || || ||||| || ||||| ||||| ||| |||| |||||||| Sbjct 40089 GATCAGCAGAGGCTCATATTTGCTGGTAAACAGCTGGAGGATGGGCGAACTCTGGCCGAT 40030 Query 29136 TACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGGT 29190 || || || |||||||||||||| |||||| | || || || | || || |||| Sbjct 40029 TATAACATCCAGAAGGAATCTACACTTCACCTTGTCTTGCGTCTGCGTGGTGGGT 39975 >seq790506 Length=27146 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || || ||||||| |||| || ||||| || || ||| ||| | || Sbjct 21873 ATGCAGATCTTTGTCAAAACCCTGACCGGAAAAACAATCACGCTTGAAGTTGAAAGCTCA 21814 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | | | ||| |||||| ||||| || || | || ||||| Sbjct 21813 GACACTATCGACAACGTCAAGGCCAAAATTCAAGATAAGGAGGGGATTCCTCCGGATCAG 21754 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || ||| | ||||||||||| || || || |||||| | ||| ||||||| ||||| Sbjct 21753 CAGAGATTGATCTTTGCGGGGAAGCAGCTTGAAGATGGGAGGACTCTGGCCGACTACAAC 21694 Query 29142 ATTCAGAAGGAATCTACTCTTCA 29164 ||||| ||||||||||| || || Sbjct 21693 ATTCAAAAGGAATCTACGCTGCA 21671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419145770559920