Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinus_20taeda_20[genbank_20GCA_5F000404065.3_202017-01-09] 1,760,464 sequences; 22,103,635,615 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq335002 208 9e-49 seq745658 172 7e-38 seq613168 161 1e-34 seq1265268 147 3e-30 seq1412493 140 4e-28 seq1440344 129 7e-25 seq224353 109 7e-19 seq1341081 87.8 2e-12 seq1642339 86.0 8e-12 seq1413718 86.0 8e-12 seq1735524 84.2 3e-11 seq1678887 84.2 3e-11 seq1591576 84.2 3e-11 seq471421 84.2 3e-11 seq237979 84.2 3e-11 seq1692948 82.4 9e-11 seq1592542 82.4 9e-11 seq1472232 82.4 9e-11 seq1180914 82.4 9e-11 seq952215 82.4 9e-11 seq460847 82.4 9e-11 seq415970 82.4 9e-11 >seq335002 Length=192544 Score = 208 bits (230), Expect = 9e-49 Identities = 606/926 (65%), Gaps = 14/926 (2%) Strand=Plus/Minus Query 62943 GCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 63002 |||| |||||||| ||||| || | | || | | | | ||||| || |||| Sbjct 28415 GCAATAGATGCCAAGTTACAGACTGTTGTTTCTATTGGACTTGTATATTCAATAATCTTT 28356 Query 63003 GTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 63062 ||||| || ||| | | ||||| ||||| | |||||| ||||| || ||| ||||||| Sbjct 28355 GTGCAGAGGTTAGAAGATTTGATGGTTCCCAGATTTTGCTGATTGCTTTTTCTGTTACAG 28296 Query 63063 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63122 |||||| | || ||| ||||| | || ||||| ||||||| ||| | ||| | | Sbjct 28295 ATATCCTTGAAGAGCATGTATGGATTTCCTGTTTCTATCTGAGCTTCCAGAATAGAAAAC 28236 Query 63123 CAGACGACTC-GAGCCTTTATTATAGATTT-GTATCTCCTTTCTCTT--TCGTATAGAGT 63178 || | | || | |||| || | ||| | | || ||||| || ||| | Sbjct 28235 CAAA-GCTTCTGTGCCTGTACAACCTTTTTTGCCTTACC---CTCTTGCTCATATTTCAT 28180 Query 63179 ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACA 63238 |||| | ||| || || || ||||| || | | | ||| ||||| ||||| Sbjct 28179 GTACAGTTCTTCAAATTCTTCACCCCAGCAATCAGCAAGCCCGGGAGCTTCATTGGGACA 28120 Query 63239 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 63298 | || | || | |||| || | |||||||||||| || | | |||||| Sbjct 28119 AAATAATGTCCGTGTAGAATTCTCCTGGACCCTTTTCATAAAGAGGTCTAGCACCCAAAG 28060 Query 63299 AGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 63358 || | ||||||||| | || ||||| || || || || |||||| | | || | Sbjct 28059 TGCAAAAAATAGATCACGTGCTCTATTCTCTTCCTTCCCATGGTTCTTTCTCAACTCCAA 28000 Query 63359 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTT 63418 ||| | | || ||| | |||||| || || | ||| ||||| | | || || ||| Sbjct 27999 AAACTCAAAAACATCTGCATGCCATGGCTCTAGGTACATGGCAAATGCACCCTTCCTTTT 27940 Query 63419 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 63478 | ||| || ||||| | || | ||| || | ||| | || ||||||||||| | ||| Sbjct 27939 GCCTCCACCTTGATCAACATAACGAGCAGTATCATTGAATACCCTCAACATTGGCACAAT 27880 Query 63479 ACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAAT 63538 ||| || ||| ||||||| || || |||||| | | | |||||||| ||| | Sbjct 27879 ACCATTCGATGTACCATTAGTTCCTCGGATATAACTACTGGTTGCACGAATGTTATGTAC 27820 Query 63539 TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATA 63598 ||| | ||| | ||| || || ||| |||| || ||| |||| || ||||| Sbjct 27819 TGAAACACCAAGTCCTCCAGCTGATTTGCTTATTACAGCACATTCCTTTAGAGTATCATA 27760 Query 63599 GATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACG 63658 || || || ||||||||||| |||| || || || |||||| || || | | Sbjct 27759 TATCCCCTCAATGCTATCATCTTTCATACAAACAAGGAAGCAGCTACTCAACTGTGGCCT 27700 Query 63659 AGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAG 63718 | || || |||| || | ||||||||||| || |||||||| || || | || Sbjct 27699 TGGTGTCCCAACATTGAAAAGTGTAGGAGAAGCATGGGTAAACCAACGTTGTGACATTAA 27640 Query 63719 ATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCAT 63778 | ||| || | |||||||| || || || | ||| || ||||| | || | ||| Sbjct 27639 CTGGTAAGTTTTGATAGCTGAATCAATGTCATTCTTATGGATCCCTACAGAAACTCTCAT 27580 Query 63779 TAACATGTGCTGAGGTCTTTC---AACAATTTTGTTGTTTATTTTCAACAAGTAGGATTT 63835 || ||| || ||||| || || ||||| | |||| ||| || | || ||| | Sbjct 27579 TATCATATGTTGAGGCCTCTCGATAACAACTCCATTGT---CTTTTAAAAGATATGATCT 27523 Query 63836 TTCCAAAGTTTTAAAACCAAAATAGT 63861 ||||| || ||||||||||| |||| Sbjct 27522 CTCCAATGTCTTAAAACCAAAGTAGT 27497 >seq745658 Length=337835 Score = 172 bits (190), Expect = 7e-38 Identities = 347/506 (69%), Gaps = 14/506 (3%) Strand=Plus/Plus Query 63004 TGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACG 63063 |||||||||| | ||||||| ||||| ||||| || ||||| ||||| |||| |||| Sbjct 230207 TGCAAAGATTTGAAGACTTGATTGTTCCCAAATTCTGCTGATTGCTCTTCCTGTTGCACG 230266 Query 63064 CATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCC 63123 ||||| || | || | ||| | |||||||| ||||||||||||| ||| || | Sbjct 230267 AGTCCTTGTACAACATATAAGGATTGCCAGTTTCTATCTGAGATTCTAAAATTGCAAACT 230326 Query 63124 AGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTCTT----TCGTATA-GAGT 63178 |||| | |||| | || | || |||| | || || ||| ||| Sbjct 230327 AGACTTTTTGAGCTTGTACAACCTTCCTGG----CCTTGCCCTGCTGCTCATATTTGAGG 230382 Query 63179 ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCC-AATCTAGGACATTCATCCGGAC 63237 || ||| || ||||| || |||| |||| | | | |||| |||| | |||| ||| Sbjct 230383 -TAAAATTTATCAAACTCTTCCCCCCCAACAGTTTGCTAATCCAGGAGACTCATTAGGAT 230441 Query 63238 ACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAA 63297 | | ||| ||||| | | || | ||||| |||||||||||||| |||||||| | Sbjct 230442 AGAACAATGACCAAGTAGCATTGTCTTGGACTCGCTTCATAAAGAGATCTGGAATCCATA 230501 Query 63298 GAGCTATA-AATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCG 63356 || | ||| || | |||||||| || | ||| || || || || ||| | | ||| Sbjct 230502 GACC-ATAGAACAAATCTCTTGCCCTGTTTTCTTCCTTGCCATGGTTTTTTATCAAATCC 230560 Query 63357 AGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGT 63416 | || | || |||||||| |||||| || || |||||||| | | | || | | Sbjct 230561 AAAAA-GTCAAAATATCAGCATGCCATGGATCGAAGTATATAGTGAAGGCACCCTTTCTT 230619 Query 63417 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 63476 ||| |||||| ||||||| || | ||| || | |||| | || ||||||||| | | Sbjct 230620 TTGCCTCCTCCTTGATCTACATAGCAAGCAGTATCATTAAACACATGCAACATTGGCACA 230679 Query 63477 ATACCGTTTGATATACCATTGGTACC 63502 |||||||||||| | ||||| || || Sbjct 230680 ATACCGTTTGATGTGCCATTTGTTCC 230705 >seq613168 Length=425085 Score = 161 bits (178), Expect = 1e-34 Identities = 350/510 (69%), Gaps = 19/510 (4%) Strand=Plus/Minus Query 63003 GTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 63062 ||||||||||| | ||||||| ||||| ||||| | ||||| |||| |||| || Sbjct 409561 GTGCAAAGATTTGAAGACTTGATTGTTCCCAAATTCTACTGATTGATCTTCCTGTTGCAT 409502 Query 63063 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63122 | ||||| || | || | ||| | | |||||| ||||||||||||| ||| || | Sbjct 409501 GAGTCCTTGTACAACATATAAGGATTGCTAGTTTCTATCTGAGATTCTAAAATTGCAAAC 409442 Query 63123 CAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCTCTT----TCGTATA-GA 63176 |||| | || |||| | || | || |||| | || || ||| || Sbjct 409441 CAGA-GTTTCTGAGCTTGTACAACCTTCCTGG----CCTTGCCCTGCTGCTCATATTTGA 409387 Query 63177 GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCC-AATCTAGGACATTCATCCGG 63235 | |||||| || ||||| || |||||| || | | | ||||||||| | |||| || Sbjct 409386 GG-TACAATTTATCAAACTCTTCCCCCCAA-CAGTCTGCTAATCTAGGAGACTCATTAGG 409329 Query 63236 ACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCA 63295 ||| | ||| ||||| | | |||| ||||| |||||||||||||| |||| || Sbjct 409328 ACAGAACAATGACCAAGTAGCATTGTCCTAGACTCGCTTCATAAAGAGATCTAGAATACA 409269 Query 63296 AAGAGCTATA-AATAGATCTCTTGTTCTATGTTCCTCGTTTCCT--GTATTCTTTTTAAG 63352 ||| | ||| || | |||||||| || | ||| || || || || || ||| | | Sbjct 409268 TAGACC-ATAGAACAAATCTCTTGCCCTGTTTTCTTCCTTGCCATGGTTTTTTTTCTCAA 409210 Query 63353 ATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGG 63412 | | | || | || |||||| | |||||| || ||||||||||| || | | || Sbjct 409209 AACCAAAAA-GTCAAAATATCGGCATGCCATGGCTCCAAGTATATAGCGAAGGCACCCTT 409151 Query 63413 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 63472 | |||| |||||| ||||||| || | ||| || | |||| | || | ||||||||| Sbjct 409150 GCTTTTGCCTCCTCCTTGATCTACATAGCGAGCAGTATCATTAAACACACGCAACATTGG 409091 Query 63473 AATAATACCGTTTGATATACCATTGGTACC 63502 | |||||| |||||| | ||||| || || Sbjct 409090 CACAATACCATTTGATGTGCCATTTGTTCC 409061 >seq1265268 Length=178387 Score = 147 bits (162), Expect = 3e-30 Identities = 343/506 (68%), Gaps = 16/506 (3%) Strand=Plus/Minus Query 63004 TGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACG 63063 |||||| ||| | ||||||| |||| ||||| | ||||| ||||| |||| |||| Sbjct 26246 TGCAAATATTTGAAGACTTGATTCTTCCCAAATTCTACTGATTGCTCTTCCTGTTGCACG 26187 Query 63064 CATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCC 63123 ||||| || | || | ||| | ||| |||| ||||||||||||| ||| || || Sbjct 26186 AGTCCTTGTACAACATATAAGGATTGCCAATTTCTATCTGAGATTCTAAAATTGCAAACC 26127 Query 63124 AGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTCTT----TCGTATA-GAGT 63178 ||| |||| | || | || || | ||| | || || ||| ||| Sbjct 26126 AGAGTTTATGAGCTTGTACAACC--TTCCTAGC--CTTGCCCTGCTGCTCATATTTGAGG 26071 Query 63179 ATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACA 63238 |||| | || ||||| || |||||| || | ||||||||| | |||| ||||| Sbjct 26070 -TACATTTTATCAAACTCTTC-CCCCAACAATCTGCTAATCTAGGAGACTCATTAGGACA 26013 Query 63239 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 63298 | ||| |||| | | |||| |||| ||||||||||||| |||||||| | Sbjct 26012 GAACAATTACCAAGTAGCATTGTCCTGGACTCTCTTCATAAAGAGATATGGAATCCATAT 25953 Query 63299 AGCTATA-AATAGATCTCTTGTTCTATGTTCCTCGTTTCC-TGTATTCTTTTTAAGATCG 63356 | | ||| || | || ||||| ||||| ||| || || || || || || | || || Sbjct 25952 A-CCATAGAACAAATATCTTGCTCTATTTTCTTCCTTGCCATGGTTTTTTCTCAAATTCA 25894 Query 63357 AGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGT 63416 | || | || |||||||| |||||| || |||||||||| | | | || | | Sbjct 25893 A--AAAGTCAAAATATCAGCATGCCATGGCTCCAAGTATACAGTGAAGGCACCCTTTCTT 25836 Query 63417 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 63476 ||| |||||| ||||||| || | ||| || | |||| | || | ||||||||| | | Sbjct 25835 TTGCCTCCTCCTTGATCTACATAGCGAGCAGTATCATTAAACACACGCAACATTGGCACA 25776 Query 63477 ATACCGTTTGATATACCATTGGTACC 63502 ||||| |||||| | ||||| || || Sbjct 25775 ATACCATTTGATGTGCCATTTGTTCC 25750 >seq1412493 Length=108133 Score = 140 bits (154), Expect = 4e-28 Identities = 232/326 (71%), Gaps = 7/326 (2%) Strand=Plus/Minus Query 63180 TACAATCGTTCGAACTCGTCTCCCCAAACATTGTCC-AATCTAGGACATTCATCCGGACA 63238 |||||| || ||||| || |||||| || | | | |||| |||| | |||| ||| | Sbjct 68200 TACAATTTATCAAACTCTTCCCCCCAA-CAGTCTGCTAATCCAGGAGACTCATTAGGATA 68142 Query 63239 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 63298 | ||| ||||| | | |||| ||||| |||||||||||||| |||||||| || Sbjct 68141 GAACAATGACCAAGTAGCATTGTCCTGGACTCGCTTCATAAAGAGATCTGGAATCCATAG 68082 Query 63299 AGCTATA-AATAGATCTCTTGTTCTATGTTCCTCGTTTCC-TGTATTCTTTTTAAGATCG 63356 | ||||| || | || ||||| | | ||| || || || ||| || ||| | | ||| Sbjct 68081 A-CTATAGAACAAATATCTTGCCTTGTTTTCTTCCTTGCCATGT-TTTTTTCTCAAATCC 68024 Query 63357 AGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGT 63416 | || | || |||||||| |||||| || |||||||||| | | | || | | Sbjct 68023 A-AAAAGTCAAAATATCAGCATGCCATGGCTCCAAGTATACAACGAAGGCACCCTTTCTT 67965 Query 63417 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 63476 ||| |||||| ||||||| || | ||| || | |||| | || | ||||||||| ||| Sbjct 67964 TTGCCTCCTCCTTGATCTACATAGCGAGCAGTATCATTAAACACACACAACATTGGCATA 67905 Query 63477 ATACCGTTTGATATACCATTGGTACC 63502 ||||| |||||| | ||||| || || Sbjct 67904 ATACCATTTGATGTGCCATTTGTTCC 67879 >seq1440344 Length=131763 Score = 129 bits (142), Expect = 7e-25 Identities = 340/512 (66%), Gaps = 19/512 (4%) Strand=Plus/Plus Query 62994 ATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTT-TGTTGATTACTCTT 63052 || || || ||||||||||| | ||||||| ||||| ||||| || ||||||||||| Sbjct 99728 ATCATTTCTGTGCAAAGATTTGAAGACTTGATTGTTCCCAAATTCCTGCTGATTACTCTT 99787 Query 63053 TTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTAT 63112 |||| |||| ||||| || | || | ||| | |||||||| || |||||||||| Sbjct 99788 CCTGTTGCACGAGTCCTTGTACAACATATAAGGATTGCCAGTTTCTATTTGAGATTCTAA 99847 Query 63113 AATCGCTTTCCAGACGACTCGAGCCTT-TATTA------TAGATTTGTATCTCCTTTCTC 63165 ||| || ||||| | || | ||| || | ||| ||| | || Sbjct 99848 AATTGCAAACCAGA-GTTTCTAAGCTTGTACAACCTTCCTAGCCTTGCCCTGCAGCTCAT 99906 Query 63166 TTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGAC 63225 ||| ||| ||| || || || || || |||||| | | ||| |||| Sbjct 99907 TTTAACATATAGTTTA-------TCAAAATCTTCCCCCCAATAGTCTGCTAATGCAGGAG 99959 Query 63226 ATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGAT 63285 | |||| ||||| | ||| ||||| | | |||| ||||| || |||||||||| Sbjct 99960 ACTCATTAGGACAGAACAATGACCAAGTAGCATTGTCCTAGACTCGCTTTATAAAGAGAT 100019 Query 63286 CAGGAATCCAAAGAGCTATA-AATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTC 63344 | ||| |||| ||| | ||| || | || ||||| || | ||| || || || || Sbjct 100020 CTGGACTCCATAGA-CCATAGAAAAAATATCTTGCACTGTTTTCTTCCTTGCCATGGTTT 100078 Query 63345 TTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATA 63404 ||| | | ||| | || | || |||||||| |||||| || |||||||||| || | Sbjct 100079 TTTCTCAAATCCA-AAAAGTCAAAATATCAGCATGCCATGGCTCCAAGTATACAGCGAAG 100137 Query 63405 ACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTC 63464 || | |||| |||||| ||||||| || | | || | |||| | || | | Sbjct 100138 GAACCCTTTCTTTTGCCTCCTCCTTGATCTACATAGTGATCAGTATCATTAAACACACGC 100197 Query 63465 AACATTGGAATAATACCGTTTGATATACCATT 63496 |||||| | | |||||| |||||| | ||||| Sbjct 100198 AACATTAGCACAATACCATTTGATGTGCCATT 100229 >seq224353 Length=132916 Score = 109 bits (120), Expect = 7e-19 Identities = 141/194 (73%), Gaps = 8/194 (4%) Strand=Plus/Minus Query 33758 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTT----ACACAAGGCATCGTTTCTATGG 33813 |||||| || |||||||||| ||||||||| | |||||| || || || || | Sbjct 9261 TATCCAGTTGAGAGCCCAATC----TTCTTTTTTTGCCAAACAAGGAATTGTCTCAATTG 9206 Query 33814 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTAT 33873 |||| || || | || ||||| ||| |||||| ||||| || || | || | ||||| Sbjct 9205 CATTGAATAGGTGATTATTTTCCTTAGGATCTTTGACATATGTTTCCAACAGTAAACTAT 9146 Query 33874 ACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGG 33933 |||| || || ||||| ||||||||||| ||||| || || || || | |||||| | Sbjct 9145 ACATCTCTGAGTGAATATTTTCAATGGCAATCTGGAACCCATAAAATGCACGAGCCTCTG 9086 Query 33934 TAATCTGCACTTCT 33947 || || |||||| Sbjct 9085 GAACTTGAACTTCT 9072 >seq1341081 Length=69594 Score = 87.8 bits (96), Expect = 2e-12 Identities = 148/213 (69%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 63413 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 63472 || |||| ||| || ||||| | || ||| || | ||| | || ||||||||||| Sbjct 39184 CCTTTTGCCTCCACCTTGATCAACATAATGAGCAGTATCATTGAATACCCTCAACATTGG 39125 Query 63473 AATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATT 63532 | |||||| |||||| ||||||| || || ||||||| || | | |||||||| || Sbjct 39124 GACAATACCATTTGATGTACCATTAGTTCCTCAGATATA-ACTACGGTTGCACGAATGTT 39066 Query 63533 ACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 63592 | | ||| | ||| | ||| || || ||| |||| || ||| |||| || Sbjct 39065 ATGTACTGAAACACCAAGTCCTCCAGCTGATTTTCTTATTATAGCACATTCCTTTAGAGT 39006 Query 63593 GTCATAGATGCCTTCTATGCTATCATCGATCAT 63625 ||||| || || || ||||||||||| |||| Sbjct 39005 ATCATATATCCCCTCAATGCTATCATCTTTCAT 38973 >seq1642339 Length=164121 Score = 86.0 bits (94), Expect = 8e-12 Identities = 158/232 (68%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 63413 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 63472 || |||| ||| || ||||| | || | ||| || | ||| | || ||||||||||| Sbjct 76828 CCTTTTGCCTCCACCTTGATCAACATAACGAGCAGTATCATTGAATACCCTCAACATTGG 76887 Query 63473 AATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATT 63532 | |||||| || ||| ||||||| || || |||||| | | | |||||||| || Sbjct 76888 CACAATACCATTCGATGTACCATTAGTTCCTCGGATATAACTACTGGTTGCACGAATGTT 76947 Query 63533 ACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 63592 | | ||| | ||| | ||| || || ||| |||| || ||| |||| || Sbjct 76948 ATGTACTGAAACACCAAGTCCTCCAGCTGATTTGCTTATTACAGCACATTCCTTTAGAGT 77007 Query 63593 GTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTA 63644 ||||| || || || ||||||||||| |||| || || || |||||| Sbjct 77008 ATCATATATCCCCTCAATGCTATCATCTTTCATACAAACAAGGAAGCAGCTA 77059 Score = 86.0 bits (94), Expect = 8e-12 Identities = 141/202 (70%), Gaps = 6/202 (3%) Strand=Plus/Plus Query 63663 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTG 63722 || || ||||| || | ||||||||||| || |||||||| || || | || || | Sbjct 77283 GTCCCAGCATTGAAAAGTGTAGGAGAAGCATGGGTAAACCAACGTTGTGACATTAAATGG 77342 Query 63723 TACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAAC 63782 || || | |||||||| || || || | ||| || ||||| || || | ||||| | Sbjct 77343 TAAGTTTTGATAGCTGAATCAATGTCATTCTTATGGATCCCTACAGCAACTCTCATTATC 77402 Query 63783 ATGTGCTGAGGTCTTTC---AACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCC 63839 || || ||||| || || ||||| | |||| ||| || | || ||| | ||| Sbjct 77403 ATATGTTGAGGCCTCTCGATAACAACTCCATTGT---CTTTTAAAAGATATGATCTCTCC 77459 Query 63840 AAAGTTTTAAAACCAAAATAGT 63861 || || ||||||||||| |||| Sbjct 77460 AATGTCTTAAAACCAAAGTAGT 77481 >seq1413718 Length=7057 Score = 86.0 bits (94), Expect = 8e-12 Identities = 141/202 (70%), Gaps = 6/202 (3%) Strand=Plus/Plus Query 63663 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTG 63722 || || ||||| || | ||||||||||| || |||||||| || || | || || | Sbjct 5991 GTCCCAGCATTGAAAAGTGTAGGAGAAGCATGGGTAAACCAACGTTGTGACATTAAATGG 6050 Query 63723 TACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAAC 63782 || || | |||||||| || || || | ||| || ||||| || || | ||||| | Sbjct 6051 TAAGTTTTGATAGCTGAATCAATGTCATTCTTATGGATCCCTACAGCAACTCTCATTATC 6110 Query 63783 ATGTGCTGAGGTCTTTC---AACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCC 63839 || || ||||| || || ||||| | |||| ||| || | || ||| | ||| Sbjct 6111 ATATGTTGAGGCCTCTCGATAACAACTCCATTGT---CTTTTAAAAGATATGATCTCTCC 6167 Query 63840 AAAGTTTTAAAACCAAAATAGT 63861 || || ||||||||||| |||| Sbjct 6168 AATGTCTTAAAACCAAAGTAGT 6189 >seq1735524 Length=5159 Score = 84.2 bits (92), Expect = 3e-11 Identities = 141/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 62922 TCTATTACAAA-CATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTC-ATTAG 62979 ||| ||||||| |||| || |||| ||||||| |||||| | || | || ||| | Sbjct 4433 TCTCTTACAAATCATGG-CAGAGCAATTGATGCCAAATTACAACCTGCAATTTCTATTGG 4491 Query 62980 CATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTT 63039 | | || | || || || |||||||||| | |||||| ||||| ||||| | Sbjct 4492 GCTACTG-TACTCGATAATTTCTTTGCAAAGATTTGAAGACTTGACTGTTCCCAAATTCT 4550 Query 63040 GTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAA 63099 ||| ||| ||||| |||| |||| ||||| || | || | | | | ||| |||||| Sbjct 4551 GTTAATTTCTCTTCGTGTTGCACGAGTCCTTGTACAACATATAAGAATTTCCAATTTCAA 4610 Query 63100 TCTGAGATTCTATAATCGC 63118 |||||||||||| ||| || Sbjct 4611 TCTGAGATTCTAAAATTGC 4629 >seq1678887 Length=74290 Score = 84.2 bits (92), Expect = 3e-11 Identities = 141/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 62922 TCTATTACAAA-CATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTC-ATTAG 62979 ||| ||||||| |||| || |||| ||||||| |||||| | || | || ||| | Sbjct 16458 TCTCTTACAAATCATGG-CAGAGCAATTGATGCCAAATTACAACCTGCAATTTCTATTGG 16400 Query 62980 CATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTT 63039 | | || | || || || |||||||||| | |||||| ||||| ||||| | Sbjct 16399 GCTACTG-TACTCGATAATTTCTTTGCAAAGATTTGAAGACTTGACTGTTCCCAAATTCT 16341 Query 63040 GTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAA 63099 ||| ||| ||||| |||| |||| ||||| || | || | | | | ||| |||||| Sbjct 16340 GTTAATTTCTCTTCGTGTTGCACGAGTCCTTGTACAACATATAAGAATTTCCAATTTCAA 16281 Query 63100 TCTGAGATTCTATAATCGC 63118 |||||||||||| ||| || Sbjct 16280 TCTGAGATTCTAAAATTGC 16262 >seq1591576 Length=7370 Score = 84.2 bits (92), Expect = 3e-11 Identities = 147/213 (69%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 63413 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 63472 || |||| ||| || ||||| | || | ||| || | ||| | || ||||||||||| Sbjct 2993 CCTTTTGCCTCCACCTTGATCAACATAACGAGCAGTATCATTGAATACCCTCAACATTGG 2934 Query 63473 AATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATT 63532 | |||||| || ||| ||||||| || || |||||| || | | |||||||| || Sbjct 2933 CACAATACCATTCGATGTACCATTAGTTCCTCGGATATA-ACTACGGTTGCACGAATGTT 2875 Query 63533 ACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 63592 | | ||| | ||| | ||| || || ||| |||| || ||| |||| || Sbjct 2874 ATGTACTGAAACACCAAGTCCTCCAGCTGATTTGCTTATTACAGCACATTCCTTTAGAGT 2815 Query 63593 GTCATAGATGCCTTCTATGCTATCATCGATCAT 63625 ||||| || || || ||||||||||| |||| Sbjct 2814 ATCATATATCCCCTCAATGCTATCATCTTTCAT 2782 >seq471421 Length=18121 Score = 84.2 bits (92), Expect = 3e-11 Identities = 147/213 (69%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 63413 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 63472 || |||| ||| || ||||| | || | ||| || | ||| | || ||||||||||| Sbjct 16746 CCTTTTGCCTCCACCTTGATCAACATAACGAGCAGTATCATTGAATACCCTCAACATTGG 16805 Query 63473 AATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATT 63532 | |||||| || ||| ||||||| || || |||||| || | | |||||||| || Sbjct 16806 CACAATACCATTCGATGTACCATTAGTTCCTCGGATATA-ACTACGGTTGCACGAATGTT 16864 Query 63533 ACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 63592 | | ||| | ||| | ||| || || ||| |||| || ||| |||| || Sbjct 16865 ATGTACTGAAACACCAAGTCCTCCAGCTGATTTGCTTATTACAGCACATTCCTTTAGAGT 16924 Query 63593 GTCATAGATGCCTTCTATGCTATCATCGATCAT 63625 ||||| || || || ||||||||||| |||| Sbjct 16925 ATCATATATCCCCTCAATGCTATCATCTTTCAT 16957 >seq237979 Length=151397 Score = 84.2 bits (92), Expect = 3e-11 Identities = 160/233 (69%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 63413 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 63472 || |||| ||| || ||||| | || | ||| || ||| | || ||||||||||| Sbjct 80997 CCTTTTGCCTCCACCTTGATCAACATAACGAGCAGTACCATTGAATACCCTCAACATTGG 80938 Query 63473 AATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATT 63532 | |||||| |||||| ||||||| || || |||||| | | | |||||||| || Sbjct 80937 CACAATACCATTTGATGTACCATTAGTTCCTCGGATATAACTACTGGTTGCACGAATGTT 80878 Query 63533 ACTAATTGATAGACCTATTCCCCCTGC-CATTTTAGAGATTAATGCGCATCGTTTTAACG 63591 | | ||| | ||| | ||| || || ||||| | |||| || ||| |||| | Sbjct 80877 ATGTACTGAAACACCAAGTCCTCCAGCTCATTTGATT-ATTACAGCACATTCCTTTAGAG 80819 Query 63592 TGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTA 63644 | | ||| || || || ||||||||||| |||| || || || |||||| Sbjct 80818 TATTATATATCCCCTCAATGCTATCATCTTTCATACAAACAAGGAAGCAGCTA 80766 >seq1692948 Length=159645 Score = 82.4 bits (90), Expect = 9e-11 Identities = 132/190 (69%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 33758 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33817 |||| | || |||||||||| || |||||| | || ||| | || || || ||| | Sbjct 120217 TATCTAGTTGAGAGCCCAATCTGCTTTCTTTGCAAGACTAGGAACTGTCTCAATTGCACT 120158 Query 33818 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 33877 || | | || ||||| ||| |||||| | ||| || || | || | ||| ||||| Sbjct 120157 GAACAAGTGATTATTTTCCTTAGGATCTTTGAGATATGTTTCCAACAGTAAACTGTACAT 120098 Query 33878 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 33937 || || ||||| ||||||||||| |||| ||| || || || | ||||| | || Sbjct 120097 ATCTGAGTGAATATTTTCAATGGCAATCTCAAACCCATAAAACGCACGAGCCTTTGGAAC 120038 Query 33938 CTGCACTTCT 33947 || |||||| Sbjct 120037 TTGAACTTCT 120028 >seq1592542 Length=199200 Score = 82.4 bits (90), Expect = 9e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 62405 CAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAA 62464 ||| ||||| | | | |||||||| ||||| ||||| | ||||||||||| || | Sbjct 17213 CAACACTCTTCTACTATAAATATTTGATGTATAAGGTTCAAAGGACTCATTATTCCCAAG 17272 Query 62465 AATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCA 62502 ||||||| |||||||||||| |||||||| || |||| Sbjct 17273 AATTTGACTAGTTGATGCAGTTGGCATAGGAGCAACCA 17310 >seq1472232 Length=522068 Score = 82.4 bits (90), Expect = 9e-11 Identities = 98/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 62994 ATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTT 63053 || || || ||||||||||| | |||| | |||| ||||| || ||||| ||||| Sbjct 152980 ATAATTTCTGTGCAAAGATTTGAAGACTTAACTATTCCAAAATTCTGCTGATTGCTCTTC 152921 Query 63054 TTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATA 63113 |||| |||| ||||| || || || | ||| | | |||||| ||||||||||||| | Sbjct 152920 CTGTTGCACGAGTCCTTGTACAGCATATAAGGATTGCTAGTTTCTATCTGAGATTCTAAA 152861 Query 63114 ATCGCTTTCCAGA 63126 || || ||||| Sbjct 152860 ATTGCAAACCAGA 152848 >seq1180914 Length=9686 Score = 82.4 bits (90), Expect = 9e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 63413 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 63472 || |||| ||| || ||||| | || | || || | ||| | || ||||||||||| Sbjct 8029 CCTTTTGCCTCCACCTTGATCAACATAACGAGTAGTATCATTGAATACCCTCAACATTGG 8088 Query 63473 AATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATT 63532 | |||||| || ||| ||||||| || || ||||||| | | | |||||||| || Sbjct 8089 CACAATACCATTCGATGTACCATTAGTTCCTCAGATATAACTACTGGTTGCACGAATGTT 8148 Query 63533 ACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 63592 | | ||| | ||| | ||| || || ||| |||| || ||| |||| || Sbjct 8149 ATGTACTGAAACACCAAGTCCTCCAGCTGATTTGCTTATTACAGCACATTCCTTTAGAGT 8208 Query 63593 GTCATAGATGCCTTCTATGCTATCATCGATCAT 63625 ||||| || || || ||||||||||| |||| Sbjct 8209 ATCATATATCCCCTCAATGCTATCATCTTTCAT 8241 >seq952215 Length=584035 Score = 82.4 bits (90), Expect = 9e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 63413 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 63472 || |||| ||| || ||||| | || | || || | ||| | || ||||||||||| Sbjct 514053 CCTTTTGCCTCCACCTTGATCAACATAACGAGTAGTATCATTGAATACCCTCAACATTGG 514112 Query 63473 AATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATT 63532 | |||||| || ||| ||||||| || || ||||||| | | | |||||||| || Sbjct 514113 CACAATACCATTCGATGTACCATTAGTTCCTCAGATATAACTACTGGTTGCACGAATGTT 514172 Query 63533 ACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 63592 | | ||| | ||| | ||| || || ||| |||| || ||| |||| || Sbjct 514173 ATGTACTGAAACACCAAGTCCTCCAGCTGATTTGCTTATTACAGCACATTCCTTTAGAGT 514232 Query 63593 GTCATAGATGCCTTCTATGCTATCATCGATCAT 63625 ||||| || || || ||||||||||| |||| Sbjct 514233 ATCATATATCCCCTCAATGCTATCATCTTTCAT 514265 >seq460847 Length=11191 Score = 82.4 bits (90), Expect = 9e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 63413 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 63472 || |||| ||| || ||||| | || | || || | ||| | || ||||||||||| Sbjct 1021 CCTTTTGCCTCCACCTTGATCAACATAACGAGTAGTATCATTGAATACCCTCAACATTGG 962 Query 63473 AATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATT 63532 | |||||| || ||| ||||||| || || ||||||| | | | |||||||| || Sbjct 961 CACAATACCATTCGATGTACCATTAGTTCCTCAGATATAACTACTGGTTGCACGAATGTT 902 Query 63533 ACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 63592 | | ||| | ||| | ||| || || ||| |||| || ||| |||| || Sbjct 901 ATGTACTGAAACACCAAGTCCTCCAGCTGATTTGCTTATTACAGCACATTCCTTTAGAGT 842 Query 63593 GTCATAGATGCCTTCTATGCTATCATCGATCAT 63625 ||||| || || || ||||||||||| |||| Sbjct 841 ATCATATATCCCCTCAATGCTATCATCTTTCAT 809 >seq415970 Length=458691 Score = 82.4 bits (90), Expect = 9e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 62994 ATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTT 63053 || || || ||||||||||| | ||||||| ||||| ||||| || | ||| ||||| Sbjct 70589 ATAATTTCTGTGCAAAGATTTGAAGACTTGATTGTTCCCAAATTCTGCTAATTGCTCTTC 70648 Query 63054 TTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATA 63113 |||| || | ||||| || | || | | | | |||||||| ||||||||||||| | Sbjct 70649 CTGTTGCATGAGTCCTTGTACAACATATAAGAATTGCCAGTTTCTATCTGAGATTCTAAA 70708 Query 63114 ATCGC 63118 || || Sbjct 70709 ATTGC 70713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 615957959857920