Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pinus_20taeda_20[genbank_20GCA_5F000404065.3_202017-01-09]
1,760,464 sequences; 22,103,635,615 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq1282417 96.9 7e-15
>seq1282417
Length=474670
Score = 96.9 bits (106), Expect = 7e-15
Identities = 226/341 (66%), Gaps = 0/341 (0%)
Strand=Plus/Plus
Query 149151 TCATTTGGACCGCTGAGATTCGTCGGCATGACTGAGACGAAATTACATCCATATTGTTTT 149210
||||||||||| ||||| || |||||| | || | || ||| || ||
Sbjct 361555 TCATTTGGACCATACAGATTGGTGGGCATGCCAGAAATCGCATCCCATTTGTACTGAAGA 361614
Query 149211 CTGTAAGCATCACACATCTCGATTCCGGCGATTTTCGCTATCGCGTATGGTTTGTTAGTG 149270
| ||||| | ||||||| || || || || || || || ||||| | |||||||
Sbjct 361615 CGATAAGCTTGGCACATCTTTATCCCAGCAATCTTAGCAATAGCGTACCACTCGTTAGTG 361674
Query 149271 GGTTCGAGAAATCCTGTCATCAGATATTCTTCCTTGATAGGATTTTGAGCTTCTTTTGGG 149330
|| || ||| || |||| || |||||| ||||||| | | || |||||
Sbjct 361675 GGCTCCAGAGGACCAGTCAAAAGTGCTTCTTCTGTGATAGGTTGCGGGGCAAACTTTGGA 361734
Query 149331 TAAATGCAACTGCTACCGAGAAACACGAGTTTTTTCACTCCGAACATTTTGGACGCATGA 149390
||||||||| ||| ||||||| || || |||||||| | | | | ||||
Sbjct 361735 TAAATGCAAGAAGAACCCAGAAACAGTAGCTTCTTCACTCCATTCTTATAGCTTGCATCG 361794
Query 149391 ATGACATTCGTCTGAATCATCAGATTATCGTGAATAAAATCGCCCCCGAAGGAGTTGTTC 149450
|| ||||| || |||||| ||||||| | || ||||| | | | | |||||
Sbjct 361795 ATCACATTTGTTTGAATCTGCAGATTAATGGCTATGAAATCAGCAGGGTAAGTATTGTTG 361854
Query 149451 GCGTGAATACCTCCTACTTTTGCAGCCGCGAGAAATACGTA 149491
|| ||||||||||| ||||| || || |||| || ||| ||
Sbjct 361855 GCATGAATACCTCCAACTTTCGCTGCTGCGACAATTACATA 361895
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1078003499378400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |