Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinus_20taeda_20[genbank_20GCA_5F000404065.3_202017-01-09] 1,760,464 sequences; 22,103,635,615 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1360146 87.8 3e-12 >seq1360146 Length=165906 Score = 87.8 bits (96), Expect = 3e-12 Identities = 85/107 (79%), Gaps = 2/107 (2%) Strand=Plus/Plus Query 25936 ATCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCAT 25994 ||||||||||| ||| | |||||| | ||||| || ||| |||||||| |||||||| Sbjct 29134 ATCTTCTGGCTGAAG-AAAAGGGGTCTAATGCCAGGCCTGACTTTTTCCAATGAGCTCAT 29192 Query 25995 CAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACA 26041 |||||||| || || ||| | |||||||||||| ||||||||| Sbjct 29193 TTCAAGGGACGAAGGCCTTCACTGCGATTTTGCCTGCTTGCTCTACA 29239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 908404827100160