Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinus_20taeda_20[genbank_20GCA_5F000404065.3_202017-01-09] 1,760,464 sequences; 22,103,635,615 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq728553 104 2e-17 seq230752 102 6e-17 seq1118728 100 2e-16 seq889306 100 2e-16 seq790506 100 2e-16 seq74577 100 2e-16 seq1684795 96.9 2e-15 seq1205411 96.9 2e-15 seq999842 96.9 2e-15 seq730927 96.9 2e-15 seq598909 96.9 2e-15 seq496553 96.9 2e-15 seq1106782 95.1 8e-15 seq102530 95.1 8e-15 seq1486149 91.5 1e-13 seq850699 91.5 1e-13 seq336321 91.5 1e-13 seq924054 86.0 4e-12 seq1577800 84.2 2e-11 seq874626 84.2 2e-11 seq571526 84.2 2e-11 seq1532893 82.4 5e-11 >seq728553 Length=135983 Score = 104 bits (114), Expect = 2e-17 Identities = 140/193 (73%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAG--CA 27847 ||||| ||||||||||||||||||||||||||| |||||||| || || || || || Sbjct 38925 ATGCAGATTTTTGTGAAAACTCTTACTGGGAAAACCATTACAATGGAGGTGGAGAGTTCA 38984 Query 27848 CCGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||||| | ||| || || || || ||||| || ||| | || ||| | Sbjct 38985 GATACGATTGATAAT--GTGAAGGCTAAGATTCAGGACAAGGACGGTATCCCTCCGGACC 39042 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 ||||| |||| |||||||| || || || |||| || | ||| | | || | ||||| | Sbjct 39043 AGCAAAGGTTGATTTTTGCTGGTAAGCAGCTGGAAGATGGACGTACCCTGGCTGATTATA 39102 Query 27968 ACATCCAAAAAGA 27980 ||||||| ||||| Sbjct 39103 ACATCCAGAAAGA 39115 >seq230752 Length=20368 Score = 102 bits (112), Expect = 6e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAG--CA 27847 ||||| ||||||||||||||||||||||||||| |||||| | || || || || || Sbjct 12142 ATGCAGATTTTTGTGAAAACTCTTACTGGGAAAACCATTACATTGGAGGTGGAGAGTTCA 12083 Query 27848 CCGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||||| | ||| || || || || ||||| || ||| | || ||| | Sbjct 12082 GATACGATTGATAAT--GTGAAGGCTAAGATTCAGGACAAGGAGGGTATCCCTCCGGACC 12025 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 ||||| || | |||||||| || || || |||| || | ||| | | || | ||||| | Sbjct 12024 AGCAAAGGCTGATTTTTGCTGGTAAGCAGCTGGAAGATGGACGTACCCTGGCTGATTATA 11965 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 ||||||| |||||| ||| |||| |||| | || | ||||| || Sbjct 11964 ACATCCAGAAAGAGTCAACTCTGCACCTGGTGCTCCGACTTCGTGGTGG 11916 >seq1118728 Length=17451 Score = 100 bits (110), Expect = 2e-16 Identities = 142/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 |||||| || ||||| ||||| || |||||||| ||| || | || ||||||||| | Sbjct 2020 AATGCAGATCTTTGTCAAAACACTCACTGGGAAGACTATCACTCTGGAAGTCGAAAGCTC 2079 Query 27849 CGA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906 || | || ||||| ||||| ||||| ||||| ||||| |||| || Sbjct 2080 TGATACAATTGACAAT--GTCAAGGCCAAAATTCAAGACAAGGAAGGCATTCCACCCGAC 2137 Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCA-GCTTGTCCGATTA 27965 ||||| || | ||||||||||||||||| | || || | ||||| |||| ||||||| Sbjct 2138 CAGCAGAGGCTGATTTTTGCCGGAAAACAGCTCGAGGATGGACGCACTCTTG-CCGATTA 2196 Query 27966 CAACATCCAAAAAGA 27980 ||||||||| || || Sbjct 2197 CAACATCCAGAAGGA 2211 Score = 82.4 bits (90), Expect = 5e-11 Identities = 138/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 |||||| || ||||| ||||| || ||||| || || || | || ||||||||| | Sbjct 1564 AATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACCATCACCTTGGAAGTCGAAAGCTC 1623 Query 27849 CGACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906 ||| || ||||| || || ||||| ||||| ||||| |||| || Sbjct 1624 TGACACAATTGACAAT--GTGAAGTCTAAAATTCAAGACAAGGAAGGGATTCCACCCGAT 1681 Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAG-CTTGTCCGATTA 27965 ||||| || | |||||||| |||||||| | || || | ||||| |||| ||||||| Sbjct 1682 CAGCAGAGGCTGATTTTTGCTGGAAAACAGCTCGAGGATGGACGCACTCTTG-CCGATTA 1740 Query 27966 CAACATCCAAAAAGA 27980 ||||||||| || || Sbjct 1741 CAACATCCAGAAGGA 1755 >seq889306 Length=17287 Score = 100 bits (110), Expect = 2e-16 Identities = 142/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 |||||| || ||||| ||||| |||||||| || ||| || | || ||||||||| | Sbjct 11233 AATGCAGATCTTTGTCAAAACCCTTACTGGCAAGACTATCACTCTGGAAGTCGAAAGCTC 11174 Query 27849 CGA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906 || | || ||||| ||||| ||||| ||||| ||||| |||| || Sbjct 11173 TGATACAATTGACAAT--GTCAAGGCCAAAATTCAAGACAAGGAAGGCATTCCACCCGAT 11116 Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAG-CTTGTCCGATTA 27965 ||||| || | ||||||||||||||||| | || |||| ||| | |||| ||||||| Sbjct 11115 CAGCAGAGGCTGATTTTTGCCGGAAAACAGCTCGAGGACGGACGTACTCTTG-CCGATTA 11057 Query 27966 CAACATCCAAAAAGA 27980 ||||||||| || || Sbjct 11056 CAACATCCAGAAGGA 11042 >seq790506 Length=27146 Score = 100 bits (110), Expect = 2e-16 Identities = 142/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 |||||| || ||||| ||||| || |||||||| ||| || | || ||||||||| | Sbjct 22102 AATGCAGATCTTTGTCAAAACACTCACTGGGAAGACTATCACTCTGGAAGTCGAAAGCTC 22043 Query 27849 CGA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906 || | || ||||| ||||| ||||| ||||| ||||| |||| || Sbjct 22042 TGATACAATTGACAAT--GTCAAGGCCAAAATTCAAGACAAGGAAGGCATTCCACCTGAC 21985 Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAG-CTTGTCCGATTA 27965 ||||| || | ||||||||||||||||| | || |||| ||| | |||| ||||||| Sbjct 21984 CAGCAGAGGCTGATTTTTGCCGGAAAACAGCTTGAGGACGGACGTACTCTTG-CCGATTA 21926 Query 27966 CAACATCCAAAAAGA 27980 ||||||||| || || Sbjct 21925 CAACATCCAGAAGGA 21911 >seq74577 Length=219802 Score = 100 bits (110), Expect = 2e-16 Identities = 142/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 |||||| || ||||| ||||| || |||||||| ||| || | || ||||||||| | Sbjct 135065 AATGCAGATCTTTGTCAAAACACTCACTGGGAAGACTATCACTCTGGAAGTCGAAAGCTC 135124 Query 27849 CGA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906 || | || ||||| ||||| ||||| ||||| ||||| |||| || Sbjct 135125 TGATACAATTGACAAT--GTCAAGGCCAAAATTCAAGACAAGGAAGGCATTCCACCCGAC 135182 Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCA-GCTTGTCCGATTA 27965 ||||| || | ||||||||||||||||| | || || | ||||| |||| ||||||| Sbjct 135183 CAGCAGAGGCTGATTTTTGCCGGAAAACAGCTCGAGGATGGACGCACTCTTG-CCGATTA 135241 Query 27966 CAACATCCAAAAAGA 27980 ||||||||| || || Sbjct 135242 CAACATCCAGAAGGA 135256 Score = 96.9 bits (106), Expect = 2e-15 Identities = 139/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 |||||| || ||||| ||||| || ||||| || ||| || | || ||||||||| | Sbjct 103386 AATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACTATCACTCTGGAAGTCGAAAGCTC 103445 Query 27849 CGA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906 || | || ||||| ||||| ||||| ||||| ||||| |||| || Sbjct 103446 TGATACAATTGACAAT--GTCAAGGCCAAAATTCAAGACAAGGAAGGGATTCCACCCGAT 103503 Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTAC 27966 ||||| || | ||||||||||||||||| | || |||| ||||| | |||||||| Sbjct 103504 CAGCAGAGGCTGATTTTTGCCGGAAAACAGCTCGAGGACGGACGCACTCTCGCCGATTAC 103563 Query 27967 AACATCCAAAAAGA 27980 |||||||| || || Sbjct 103564 AACATCCAGAAGGA 103577 Score = 82.4 bits (90), Expect = 5e-11 Identities = 138/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 |||||| || ||||| ||||| || ||||| || || || | || ||||||||| | Sbjct 134609 AATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACCATCACCTTGGAAGTCGAAAGCTC 134668 Query 27849 CGACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906 ||| || ||||| || || ||||| ||||| ||||| |||| || Sbjct 134669 TGACACAATTGACAAT--GTGAAGTCTAAAATTCAAGACAAGGAAGGGATTCCACCCGAT 134726 Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAG-CTTGTCCGATTA 27965 ||||| || | |||||||| |||||||| | || || | ||||| |||| ||||||| Sbjct 134727 CAGCAGAGGCTGATTTTTGCTGGAAAACAGCTCGAGGATGGACGCACTCTTG-CCGATTA 134785 Query 27966 CAACATCCAAAAAGA 27980 ||||||||| || || Sbjct 134786 CAACATCCAGAAGGA 134800 >seq1684795 Length=260646 Score = 96.9 bits (106), Expect = 2e-15 Identities = 141/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 |||||| || ||||| ||||| || ||||| || ||| || | || ||||||||| | Sbjct 98448 AATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACTATCACTCTGGAAGTCGAAAGCTC 98507 Query 27849 CGA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906 || | || ||||| ||||| ||||| ||||| ||||| |||| || Sbjct 98508 TGATACAATTGACAAT--GTCAAGGCCAAAATTCAAGACAAGGAAGGCATTCCACCCGAT 98565 Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCA-GCTTGTCCGATTA 27965 ||||| || | ||||||||||||||||| | || |||| ||| | |||| ||||||| Sbjct 98566 CAGCAGAGGCTGATTTTTGCCGGAAAACAGCTCGAGGACGGACGTACTCTTG-CCGATTA 98624 Query 27966 CAACATCCAAAAAGA 27980 ||||||||| || || Sbjct 98625 CAACATCCAGAAGGA 98639 >seq1205411 Length=103332 Score = 96.9 bits (106), Expect = 2e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||||||||||||||| |||||||||||| ||||| | || || || ||| | Sbjct 98862 ATGCAAATTTTTGTGAAAACCCTTACTGGGAAAACCATTACTTTGGAGGTGGAGAGCTCA 98921 Query 27850 G--ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 | ||||| | ||| || || || || ||||| || ||| | || || | Sbjct 98922 GATACGATTGATAAT--GTGAAGGCTAAGATCCAGGACAAGGAGGGTATCCCTCCAGACC 98979 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | ||| |||| || ||||| || || || ||||| || | ||| | | || | ||||| | Sbjct 98980 AACAAAGGTTGATATTTGCTGGTAAGCAGTTGGAAGATGGACGTACCCTGGCTGATTATA 99039 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 ||||||| |||||| ||| |||| |||| | || | ||||| || Sbjct 99040 ACATCCAGAAAGAGTCAACTCTGCACCTGGTGCTCCGACTTCGTGGTGG 99088 >seq999842 Length=17275 Score = 96.9 bits (106), Expect = 2e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||||||||||||||| |||||||||||| ||||| | || || || ||| | Sbjct 4060 ATGCAAATTTTTGTGAAAACCCTTACTGGGAAAACCATTACTTTGGAGGTGGAGAGCTCA 4001 Query 27850 G--ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 | ||||| | ||| || || || || ||||| || ||| | || || | Sbjct 4000 GATACGATTGATAAT--GTGAAGGCTAAGATCCAGGACAAGGAGGGTATCCCTCCAGACC 3943 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | ||| |||| || ||||| || || || ||||| || | ||| | | || | ||||| | Sbjct 3942 AACAAAGGTTGATATTTGCTGGTAAGCAGTTGGAAGATGGACGTACCCTGGCTGATTATA 3883 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 ||||||| |||||| ||| |||| |||| | || | ||||| || Sbjct 3882 ACATCCAGAAAGAGTCAACTCTGCACCTGGTGCTCCGACTTCGTGGTGG 3834 >seq730927 Length=2450 Score = 96.9 bits (106), Expect = 2e-15 Identities = 141/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 |||||| || ||||| ||||| || ||||| || ||| || | || ||||||||| | Sbjct 939 AATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACTATCACTCTGGAAGTCGAAAGCTC 880 Query 27849 CGA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906 || | || ||||| ||||| ||||| ||||| ||||| |||| || Sbjct 879 TGATACAATTGACAAT--GTCAAGGCCAAAATTCAAGACAAGGAAGGCATTCCACCCGAT 822 Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAG-CTTGTCCGATTA 27965 ||||| || | ||||||||||||||||| | || |||| ||| | |||| ||||||| Sbjct 821 CAGCAGAGGCTGATTTTTGCCGGAAAACAGCTCGAGGACGGACGTACTCTTG-CCGATTA 763 Query 27966 CAACATCCAAAAAGA 27980 ||||||||| || || Sbjct 762 CAACATCCAGAAGGA 748 Score = 82.4 bits (90), Expect = 5e-11 Identities = 138/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 |||||| || ||||| ||||| || ||||| || || || | || ||||||||| | Sbjct 1395 AATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACCATCACCTTGGAAGTCGAAAGCTC 1336 Query 27849 CGACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906 ||| || ||||| || || ||||| ||||| ||||| |||| || Sbjct 1335 TGACACAATTGACAAT--GTGAAGTCTAAAATTCAAGACAAGGAAGGGATTCCACCCGAT 1278 Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAG-CTTGTCCGATTA 27965 ||||| || | |||||||| |||||||| | || || | ||||| |||| ||||||| Sbjct 1277 CAGCAGAGGCTGATTTTTGCTGGAAAACAGCTCGAGGATGGACGCACTCTTG-CCGATTA 1219 Query 27966 CAACATCCAAAAAGA 27980 ||||||||| || || Sbjct 1218 CAACATCCAGAAGGA 1204 >seq598909 Length=480040 Score = 96.9 bits (106), Expect = 2e-15 Identities = 141/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 |||||| || ||||| ||||| || ||| | || ||| || | || ||| ||||| | Sbjct 404424 AATGCAGATCTTTGTCAAAACCCTCACTAGCAAGACTATCACTCTGGAAGTCAAAAGCTC 404365 Query 27849 CGA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906 || | || ||||| ||||| ||||| ||||| ||||| |||| ||| Sbjct 404364 TGATACAATTGACAAT--GTCAAGGCCAAAATTTAAGACAAGGAAGGCATTCCACCGGAT 404307 Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAG-CTTGTCCGATTA 27965 || || || | ||||||||||||||||| | || |||||||||| |||| ||||||| Sbjct 404306 CAACAGAGGCTGATTTTTGCCGGAAAACAGCTTGAGGACGAACGCACTCTTG-CCGATTA 404248 Query 27966 CAACATCCAAAAAGA 27980 ||||||||| || || Sbjct 404247 CAACATCCAGAAGGA 404233 >seq496553 Length=98900 Score = 96.9 bits (106), Expect = 2e-15 Identities = 142/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 |||||| || ||||| ||||| || ||||| || ||| || | || ||||| ||| | Sbjct 47552 AATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACTATCACTCTGGAAGTCGATAGCTC 47493 Query 27849 CGACG-ATGT-ACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906 || || | | ||| ||||| ||||| ||||| ||||| |||| | || Sbjct 47492 TGATACATTTGAAAAT--GTCAAGGCCAAAATTCAAGACAAGGAAGGCATTCCCCTTGAT 47435 Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAG-CTTGTCCGATTA 27965 ||||| || | ||||||||||||||||| | || |||| ||||| |||| | ||||| Sbjct 47434 CAGCAGAGGCTGATTTTTGCCGGAAAACAGCTTGAGGACGGACGCACTCTTG-CGGATTA 47376 Query 27966 CAACATCCAAAAAGA 27980 ||||||||||||||| Sbjct 47375 CAACATCCAAAAAGA 47361 >seq1106782 Length=21075 Score = 95.1 bits (104), Expect = 8e-15 Identities = 138/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || ||||| ||||| || ||||| || ||||| | || ||||||||| | Sbjct 3686 ATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACCATTACTTTGGAAGTCGAAAGCTCT 3745 Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| || ||||| || || ||||| ||||||||||| |||| || | Sbjct 3746 GACACAATTGACAAT--GTGAAGGCTAAAATTCAAGACAAAGAAGGGATTCCACCCGACC 3803 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| || |||| ||||| |||||||| |||| |||| ||||| | ||||||||| Sbjct 3804 AGCAGAGGCTAATCTTTGCTGGAAAACAGCTGGAGGACGGACGCACTCTCGCCGATTACA 3863 Query 27968 ACATCCAAAAAGA 27980 ||||||| || || Sbjct 3864 ACATCCAGAAGGA 3876 >seq102530 Length=63980 Score = 95.1 bits (104), Expect = 8e-15 Identities = 138/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || ||||| ||||| || ||||| || ||||| | || ||||||||| | Sbjct 55966 ATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACCATTACTTTGGAAGTCGAAAGCTCT 56025 Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| || ||||| || || ||||| ||||||||||| |||| || | Sbjct 56026 GACACAATTGACAAT--GTGAAGGCTAAAATTCAAGACAAAGAAGGGATTCCACCCGACC 56083 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| || |||| ||||| |||||||| |||| |||| ||||| | ||||||||| Sbjct 56084 AGCAGAGGCTAATCTTTGCTGGAAAACAGCTGGAGGACGGACGCACTCTCGCCGATTACA 56143 Query 27968 ACATCCAAAAAGA 27980 ||||||| || || Sbjct 56144 ACATCCAGAAGGA 56156 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/193 (71%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || ||||| ||||| || ||||| || ||||| | || ||||||||| | Sbjct 3687 ATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACCATTACTTTGGAAGTCGAAAGCTCT 3746 Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| || ||||| || || ||||| ||||||||||| |||| || | Sbjct 3747 GACACAATTGACAAT--GTGAAGGCTAAAATTCAAGACAAAGAAGGAATTCCACCCGACC 3804 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| || |||| ||||| |||||||| | || |||| ||||| | ||||||||| Sbjct 3805 AGCAGAGGCTAATCTTTGCTGGAAAACAGCTCGAGGACGGACGCACTCTCGCCGATTACA 3864 Query 27968 ACATCCAAAAAGA 27980 ||||||| || || Sbjct 3865 ACATCCAGAAGGA 3877 >seq1486149 Length=44583 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/193 (71%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || ||||| ||||| || ||||| || ||||| | || ||||||||| | Sbjct 26574 ATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACCATTACTTTGGAAGTCGAAAGCTCT 26633 Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| || ||||| || || ||||| ||||||||||| |||| || | Sbjct 26634 GACACAATTGACAAT--GTGAAGGCTAAAATTCAAGACAAAGAAGGAATTCCACCCGACC 26691 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| || |||| ||||| |||||||| | || |||| ||||| | ||||||||| Sbjct 26692 AGCAGAGGCTAATCTTTGCTGGAAAACAGCTCGAGGACGGACGCACTCTCGCCGATTACA 26751 Query 27968 ACATCCAAAAAGA 27980 ||||||| || || Sbjct 26752 ACATCCAGAAGGA 26764 >seq850699 Length=98674 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 |||||| || ||||| ||||| || ||||| || ||| || | || ||||||||| | Sbjct 25961 AATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACTATCACTCTGGAAGTCGAAAGCTC 25902 Query 27849 CGA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906 || | || ||||| ||||| ||||| ||||| ||||| |||| ||| Sbjct 25901 TGATACAATTGACAAT--GTCAAGGCCAAAATTCAAGACAAGGAAGGCATTCCACCGGAT 25844 Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAG-CTTGTCCGATTA 27965 ||||| || | ||||||| | ||||||| | || ||| ||||| |||| ||||||| Sbjct 25843 CAGCAGAGGCTGATTTTTGTCAGAAAACAGCTTGAGGACAGACGCACTCTTG-CCGATTA 25785 Query 27966 CAACATCCAAAAAGA 27980 ||||||||| || || Sbjct 25784 CAACATCCAGAAGGA 25770 >seq336321 Length=2731 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 |||||| || ||||| ||||| || ||||| || ||| || | || ||||||||| | Sbjct 2465 AATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACTATCACTCTGGAAGTCGAAAGCTC 2406 Query 27849 CGA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906 || | || ||||| ||||| ||||| ||||| ||||| |||| ||| Sbjct 2405 TGATACAATTGACAAT--GTCAAGGCCAAAATTCAAGACAAGGAAGGCATTCCACCGGAT 2348 Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAG-CTTGTCCGATTA 27965 ||||| || | ||||||| | ||||||| | || ||| ||||| |||| ||||||| Sbjct 2347 CAGCAGAGGCTGATTTTTGTCAGAAAACAGCTTGAGGACAGACGCACTCTTG-CCGATTA 2289 Query 27966 CAACATCCAAAAAGA 27980 ||||||||| || || Sbjct 2288 CAACATCCAGAAGGA 2274 >seq924054 Length=140678 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| |||||||| ||||| || ||||| || || || | || || || ||| | Sbjct 15009 ATGCAGATTTTTGTTAAAACCCTCACTGGAAAGACGATCACCTTGGAAGTTGAGAGCTCG 15068 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || | || ||||| || ||| || || |||||||| || |||| || | Sbjct 15069 GATACCATTGACAAT--GTAAAAGCCAAGATCCAGGACAAAGAGGGCATTCCCCCTGACC 15126 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| || ||||| ||||||||||| || | || |||| | | | | ||||||||| Sbjct 15127 AGCAGCGTTTAATCTTTGCCGGAAAGCAGCTCGAGGACGGGAGAACCCTTGCCGATTACA 15186 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017 ||||||| ||||| ||| ||||| |||| | ||| || | || ||| Sbjct 15187 ACATCCAGAAAGAATCCACCTTGCACCTGGTCCTCCGTCTGAGGGGTGGC 15236 >seq1577800 Length=4899 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/194 (70%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| ||||||||||||||||||| ||||||| ||||| | || || || ||| | Sbjct 2305 ATGCAGATTTTTGTGAAAACTCTTATTGGGAAAACCATTACGTTGGAGGTGGAGAGCTCA 2246 Query 27850 G--ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 | ||||| | ||| || || || || ||||| || ||| | || || | Sbjct 2245 GATACGATTGATAAT--GTGAAGGCTAAGATTCAGGACAAGGAGGGTATCCCTCCAGACC 2188 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 ||||| |||| || ||||| || || || |||| || | || | | || | ||||| | Sbjct 2187 AGCAAAGGTTGATATTTGCTGGTAAGCAGCTGGAAGATGGTCGTACCCTGGCTGATTATA 2128 Query 27968 ACATCCAAAAAGAG 27981 ||||||| |||||| Sbjct 2127 ACATCCAGAAAGAG 2114 >seq874626 Length=5803 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/194 (70%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| ||||||||||||||||||| ||||||| ||||| | || || || ||| | Sbjct 3500 ATGCAGATTTTTGTGAAAACTCTTATTGGGAAAACCATTACGTTGGAGGTGGAGAGCTCA 3559 Query 27850 G--ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 | ||||| | ||| || || || || ||||| || ||| | || || | Sbjct 3560 GATACGATTGATAAT--GTGAAGGCTAAGATTCAGGACAAGGAGGGTATCCCTCCAGACC 3617 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 ||||| |||| || ||||| || || || |||| || | || | | || | ||||| | Sbjct 3618 AGCAAAGGTTGATATTTGCTGGTAAGCAGCTGGAAGATGGTCGTACCCTGGCTGATTATA 3677 Query 27968 ACATCCAAAAAGAG 27981 ||||||| |||||| Sbjct 3678 ACATCCAGAAAGAG 3691 >seq571526 Length=18416 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/194 (70%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| ||||||||||||||||||| ||||||| ||||| | || || || ||| | Sbjct 4812 ATGCAGATTTTTGTGAAAACTCTTATTGGGAAAACCATTACGTTGGAGGTGGAGAGCTCA 4871 Query 27850 G--ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 | ||||| | ||| || || || || ||||| || ||| | || || | Sbjct 4872 GATACGATTGATAAT--GTGAAGGCTAAGATTCAGGACAAGGAGGGTATCCCTCCAGACC 4929 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 ||||| |||| || ||||| || || || |||| || | || | | || | ||||| | Sbjct 4930 AGCAAAGGTTGATATTTGCTGGTAAGCAGCTGGAAGATGGTCGTACCCTGGCTGATTATA 4989 Query 27968 ACATCCAAAAAGAG 27981 ||||||| |||||| Sbjct 4990 ACATCCAGAAAGAG 5003 >seq1532893 Length=286854 Score = 82.4 bits (90), Expect = 5e-11 Identities = 138/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || ||||| ||||| || || ||||| |||||| | || || || || | Sbjct 40659 ATGCAGATCTTTGTCAAAACCCTGACCGGGAAGACTATTACCTTGGAAGTTGAGAGTTCT 40600 Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| || ||||| ||||| || || ||||| || || |||| ||| | Sbjct 40599 GACACCATTGACAAT--GTCAAGGCCAAGATCCAAGACAAGGAGGGGATTCCACCGGACC 40542 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAG-CTTGTCCGATTAC 27966 |||| |||| || ||||| ||||| ||| | || |||| ||||| |||| |||||||| Sbjct 40541 AGCAGAGGTTGATCTTTGCTGGAAAGCAACTTGAGGACGGACGCACTCTTG-CCGATTAC 40483 Query 27967 AACATCCAAAAAGAG 27981 |||||||| || ||| Sbjct 40482 AACATCCAGAAGGAG 40468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 348227139118128