Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinus_20taeda_20[genbank_20GCA_5F000404065.3_202017-01-09] 1,760,464 sequences; 22,103,635,615 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq110947 107 2e-18 seq1205411 104 2e-17 seq999842 104 2e-17 seq924054 104 2e-17 seq8373 104 2e-17 seq1106687 95.1 1e-14 seq230752 95.1 1e-14 seq1588668 91.5 1e-13 seq1097520 91.5 1e-13 seq452168 89.7 4e-13 seq1532893 87.8 2e-12 seq970285 87.8 2e-12 seq496553 87.8 2e-12 seq1242598 86.0 5e-12 seq1453129 84.2 2e-11 seq1394563 84.2 2e-11 seq1203529 84.2 2e-11 seq728553 82.4 6e-11 seq512796 82.4 6e-11 >seq110947 Length=79683 Score = 107 bits (118), Expect = 2e-18 Identities = 160/223 (72%), Gaps = 8/223 (4%) Strand=Plus/Minus Query 39067 AAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGT 39126 || ||||| || | || |||||| || || || ||||||||||| ||||| |||||| Sbjct 30266 AAACGTAAGACAAGGTGAAGCGTGGATTCCTTCTGGATATTATAATCAGCAAGGGTTCGT 30207 Query 39127 TCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTC 39185 |||| || ||||| ||||| ||||| || || | |||||| || |||||| | || || Sbjct 30206 CCGTCCTCCAGCTGCTTGCCAGCAAAAATGAGCCTCTGCTGATCAGGTGGGATCCCT-TC 30148 Query 39186 TTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATC---GCTCGACTCCACGTCCAC 39242 |||||| || ||| || | | | | |||||| ||| ||| || |||| Sbjct 30147 CTTGTCCTGAATCTTCGCCTTCACATTATCAATCGTATCCGAGCT---CTCAACCTCCAG 30091 Query 39243 CGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATC 39285 || ||| | |||||||||| || || ||||| ||||||||| Sbjct 30090 TGTAATAGTCTTTCCCGTCAAAGTCTTCACAAATATTTGCATC 30048 >seq1205411 Length=103332 Score = 104 bits (114), Expect = 2e-17 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 || || |||||||||||||| ||||||||||| |||| |||||||| || || ||||| Sbjct 98596 TCCTTCTGTATATTATAATCAGCAAGTGTTCGCCCGTCTTCAAGCTGCTTTCCAGCAAAG 98537 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTC 39213 || |||||||||||||| | ||| | || || || ||| ||| || |||| | Sbjct 98536 ATCAGACGCTGCTGGTCAGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTGACATTG 98477 Query 39214 GCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTA 39270 | | || || ||| ||| || |||| || || | || || || || |||||| Sbjct 98476 TCAATGGTGTCTGAGCT---CTCAACCTCCAAAGTTATTGTCTTGCCAGTGAGGGTTTTA 98420 Query 39271 ACAAAGATTTGCAT 39284 ||||| |||||||| Sbjct 98419 ACAAATATTTGCAT 98406 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/197 (71%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 || || || ||||| || ||||| |||||||| |||| || ||||| || || ||||| Sbjct 98140 TCCTTCTGAATATTGTAGTCGGCCAGTGTTCGGCCGTCTTCTAGCTGCTTTCCTGCAAAG 98081 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT--CTGTTTGAGCG 39211 || ||||||||||| |||| ||| | || ||| |||||| ||| || | || | | Sbjct 98080 ATCAGACGCTGCTGATCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTTACATTG 98021 Query 39212 TCGCCACCGT-ATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTA 39270 || | || | ||| || || || | ||||| | || || || || |||||| Sbjct 98020 TCAATAGTGTCAGAGCT---TTCAACCTCGAGGGTGATCGTCTTACCAGTGAGAGTTTTA 97964 Query 39271 ACAAAGATTTGCATCTT 39287 |||||||| |||||||| Sbjct 97963 ACAAAGATCTGCATCTT 97947 >seq999842 Length=17275 Score = 104 bits (114), Expect = 2e-17 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 || || |||||||||||||| ||||||||||| |||| |||||||| || || ||||| Sbjct 4326 TCCTTCTGTATATTATAATCAGCAAGTGTTCGCCCGTCTTCAAGCTGCTTTCCAGCAAAG 4385 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTC 39213 || |||||||||||||| | ||| | || || || ||| ||| || |||| | Sbjct 4386 ATCAGACGCTGCTGGTCAGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTGACATTG 4445 Query 39214 GCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTA 39270 | | || || ||| ||| || |||| || || | || || || || |||||| Sbjct 4446 TCAATGGTGTCTGAGCT---CTCAACCTCCAAAGTTATTGTCTTGCCAGTGAGGGTTTTA 4502 Query 39271 ACAAAGATTTGCAT 39284 ||||| |||||||| Sbjct 4503 ACAAATATTTGCAT 4516 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/197 (71%), Gaps = 6/197 (3%) Strand=Plus/Plus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 || || || ||||| || ||||| |||||||| |||| || ||||| || || ||||| Sbjct 4782 TCCTTCTGAATATTGTAGTCGGCCAGTGTTCGGCCGTCTTCTAGCTGCTTTCCTGCAAAG 4841 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT--CTGTTTGAGCG 39211 || ||||||||||| |||| ||| | || ||| |||||| ||| || | || | | Sbjct 4842 ATCAGACGCTGCTGATCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTTACATTG 4901 Query 39212 TCGCCACCGT-ATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTA 39270 || | || | ||| || || || | ||||| | || || || || |||||| Sbjct 4902 TCAATAGTGTCAGAGCT---TTCAACCTCGAGGGTGATCGTCTTACCAGTGAGAGTTTTA 4958 Query 39271 ACAAAGATTTGCATCTT 39287 |||||||| |||||||| Sbjct 4959 ACAAAGATCTGCATCTT 4975 >seq924054 Length=140678 Score = 104 bits (114), Expect = 2e-17 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 ||||| || || || ||||||||||| |||| |||| || ||||| || || ||||| Sbjct 15199 TCTTTCTGGATGTTGTAATCGGCAAGGGTTCTCCCGTCCTCGAGCTGCTTTCCGGCAAAG 15140 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTC 39213 || | |||||||||||| | ||| | || |||||||||| ||| || ||| | | Sbjct 15139 ATTAAACGCTGCTGGTCAGGGGGAATGCCCTCTTTGTCCTGGATCTTGGCTTTTACATTG 15080 Query 39214 GCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTA 39270 | | ||||| ||| ||| || |||| ||||| | ||||| || || |||||| Sbjct 15079 TCAATGGTATCCGAGCT---CTCAACTTCCAAGGTGATCGTCTTTCCAGTGAGGGTTTTA 15023 Query 39271 ACAAAGATTTGCAT 39284 ||||| || ||||| Sbjct 15022 ACAAAAATCTGCAT 15009 Score = 91.5 bits (100), Expect = 1e-13 Identities = 147/210 (70%), Gaps = 6/210 (3%) Strand=Plus/Minus Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140 ||| |||||| || || || ||||| ||||||||||| ||||| | || || ||||| Sbjct 14756 ATGCAGCGTGGATTCCTTCTGGATATTGTAATCGGCAAGGGTTCGGCCATCTTCCAGCTG 14697 Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200 || || |||||||| |||||||| ||||| | ||| | || || || ||| |||||| Sbjct 14696 CTTTCCAGCAAATATCAGACGCTGTTGGTCCGGGGGAATGCCTTCCTTATCCTGGATTTT 14637 Query 39201 CTGTTTGAGCGTCGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCC 39257 || | | | | || || ||| ||| || || | ||||| | || || Sbjct 14636 TGCCTTTACATTGTCAATGGTGTCAGAGCT---CTCGACTTCAAGAGTGATGGTCTTGCC 14580 Query 39258 CGTCAGCGTTTTAACAAAGATTTGCATCTT 39287 || || ||||| || |||||||||||||| Sbjct 14579 GGTAAGAGTTTTGACGAAGATTTGCATCTT 14550 Score = 89.7 bits (98), Expect = 4e-13 Identities = 137/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 || ||||| ||||| || || || || ||||| |||| || ||||| || || |||||| Sbjct 14971 TCCTTTTGAATATTGTAGTCTGCCAGGGTTCGGCCGTCTTCGAGCTGCTTTCCGGCAAAT 14912 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTC 39213 || |||||||||||||| | || | | || |||||| ||| || ||| | | Sbjct 14911 ATCAGACGCTGCTGGTCAGGCGGGATTCCTTCCTTGTCCTGGATCTTGGCTTTTACATTG 14852 Query 39214 GCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTA 39270 | | ||||| ||| ||| || |||| ||| || | ||||| ||||| ||||| Sbjct 14851 TCAATGGTATCCGAGCT---CTCAACTTCCAACGTTATCGTCTTTCCAGTCAGGGTTTTG 14795 Query 39271 ACAAAGATTTGCAT 39284 || ||||| ||||| Sbjct 14794 ACGAAGATCTGCAT 14781 >seq8373 Length=31397 Score = 104 bits (114), Expect = 2e-17 Identities = 154/217 (71%), Gaps = 6/217 (3%) Strand=Plus/Minus Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140 ||| |||||| || || || || || ||||||||||| || || |||| || ||||| Sbjct 8550 ATGCAGCGTGGATTCCTTCTGGATGTTGTAATCGGCAAGGGTACGGCCGTCCTCCAGCTG 8491 Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200 ||| || |||||||| |||||||||||||| | ||| | || || |||||| ||| || Sbjct 8490 TTTTCCGGCAAATATCAGACGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTT 8431 Query 39201 CTGTTTGAGCGTCGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCC 39257 || | | | | || || ||| ||| || || | ||||| | || || Sbjct 8430 GGCCTTTACATTGTCAATGGTGTCAGAGCT---CTCAACCTCGAGAGTGATGGTCTTGCC 8374 Query 39258 CGTCAGCGTTTTAACAAAGATTTGCATCTTTACGCCG 39294 || || |||||||||||||| |||||||| | |||| Sbjct 8373 GGTAAGGGTTTTAACAAAGATCTGCATCTTGAAGCCG 8337 Score = 96.9 bits (106), Expect = 3e-15 Identities = 172/249 (69%), Gaps = 8/249 (3%) Strand=Plus/Minus Query 39039 TAACTAAAATTTATTCAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTT 39098 |||| ||||| | || ||||||||||| || | ||||| ||| || || ||| || Sbjct 9275 TAACAAAAATCTG--CATGCCTCCTCTTAGACGGAGCACCAGATGCAGGGTAGACTCCTT 9218 Query 39099 TTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAG 39158 ||| || || || || || || |||| |||| || ||||| || || ||||| || || Sbjct 9217 TTGAATGTTGTAGTCAGCCAGGGTTCTGCCGTCTTCGAGCTGCTTTCCGGCAAAGATCAG 9158 Query 39159 ACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCAC 39218 |||||||||||| | ||| | | ||||||||| ||| || |||| | | | Sbjct 9157 ACGCTGCTGGTCAGGGGGAATCCCTTCTTTGTCCTGGATCTTGGCCTTGACATTATCAAT 9098 Query 39219 CGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAA 39275 || || ||| ||| || |||| || || | || || || || ||||||||||| Sbjct 9097 GGTGTCTGAGCT---CTCAACCTCCAAAGTAATTGTCTTGCCAGTGAGGGTTTTAACAAA 9041 Query 39276 GATTTGCAT 39284 || ||||| Sbjct 9040 AATCTGCAT 9032 >seq1106687 Length=18734 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || ||||||||||| || ||||| | || || |||||||| || ||||| Sbjct 13468 CTCCTTCTGGATGTTATAATCGGCCAGAGTTCGCCCATCCTCCAGCTGTTTACCAGCAAA 13409 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 ||| || | |||||| |||| || | | || |||||| |||||| ||| | | Sbjct 13408 TATGAGCCTCTGCTGATCGGGAGGAATCCCTTCCTTGTCCTGAATTTTCGCTTTTACATT 13349 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | ||||||| ||| || |||| |||||| | || || |||| ||| || || Sbjct 13348 ATCAATCGTATCGGAACTCTCAACCTCCAGTGTGATAGTCTTGCCTGTCAACGTCTTCAC 13289 Query 39273 AAAGATTTGCAT 39284 ||| || ||||| Sbjct 13288 AAATATCTGCAT 13277 >seq230752 Length=20368 Score = 95.1 bits (104), Expect = 1e-14 Identities = 138/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 || || |||||||| ||||| ||||||||||| |||| ||||| ||||| || ||||| Sbjct 12408 TCCTTCTGTATATTGTAATCAGCAAGTGTTCGCCCGTCTTCAAGTTGTTTTCCGGCAAAG 12467 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTC 39213 || |||||||||||||| | ||| | || || || ||| ||| || || | | Sbjct 12468 ATCAGACGCTGCTGGTCAGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTAACATTG 12527 Query 39214 GCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTA 39270 | | || || ||| ||| || |||| ||| || | || || || || |||||| Sbjct 12528 TCAATGGTGTCTGAGCT---CTCAACTTCCAACGTTATTGTCTTCCCAGTGAGGGTTTTA 12584 Query 39271 ACAAAGATTTGCAT 39284 ||||| || ||||| Sbjct 12585 ACAAATATCTGCAT 12598 >seq1588668 Length=25065 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/197 (71%), Gaps = 6/197 (3%) Strand=Plus/Plus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 ||||| || || || ||||||||||| ||||| |||| |||||||| || || || || Sbjct 17533 TCTTTCTGGATGTTGTAATCGGCAAGGGTTCGGCCGTCCTCAAGCTGCTTTCCTGCGAAG 17592 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTC 39213 || |||||||||||||||| ||| | | || |||||| ||| || ||| | | Sbjct 17593 ATCAGACGCTGCTGGTCGGGGGGAATCCCTTCCTTGTCCTGGATCTTAGCTTTAACATTG 17652 Query 39214 GCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTA 39270 | | || || ||| ||| || || | ||||| | || || || || || || Sbjct 17653 TCAATGGTGTCAGAGCT---CTCGACTTCGAGAGTGATGGTCTTACCGGTGAGGGTCTTG 17709 Query 39271 ACAAAGATTTGCATCTT 39287 |||||||| |||||||| Sbjct 17710 ACAAAGATCTGCATCTT 17726 Score = 89.7 bits (98), Expect = 4e-13 Identities = 163/235 (69%), Gaps = 8/235 (3%) Strand=Plus/Plus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || ||||||||||| || | ||||||||| || || || ||||| ||||| ||||| Sbjct 17265 CATGCCTCCTCTTAGACGAAGCACCAAATGCAGGGTCGATTCCTTTTGAATATTGTAATC 17324 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 || | || | | || || ||||| || || || || ||||| | ||||||||| | Sbjct 17325 AGCCAAGGTCCTGCCATCCTCCAGCTGCTTACCAGCGAAGATAAGCCTCTGCTGGTCAGG 17384 Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATC---GCTCG 39229 ||| | | || |||||| ||| || |||| ||| | | | || || ||| Sbjct 17385 GGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATGGTGTCCGAGCT-- 17441 Query 39230 ACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||| || |||| || || | ||||| || || ||||| |||||||||||||| Sbjct 17442 -CTCAACTTCCAATGTAATTGTCTTTCCAGTTAGTGTTTTTACAAAGATTTGCAT 17495 >seq1097520 Length=690056 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 || ||||| | || | || | ||| || ||| || || || || || || |||||| Sbjct 575542 CCACCTCTCAGACGGAGGACAAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCA 575483 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || ||||| |||| |||||||| || || ||||| || ||||| ||||| || | ||| Sbjct 575482 AGGGTTCGACCGTCCTCAAGCTGCTTCCCAGCAAAAATCAGACGTTGCTGATCAGGGGGG 575423 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | || || || ||| ||| || || | | | | ||||| | ||| || Sbjct 575422 ATGCCTTCCTTATCCTGGATCTTGGCCTTTACATTGTCAATGGTATCAGAGGTCTCGACC 575363 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287 || | |||||| | || || || || || |||||||||||||||||||| Sbjct 575362 TCGAGAGTGATAGTCTTGCCGGTTAGGGTCTTAACAAAGATTTGCATCTT 575313 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 ||||| || ||||| || || ||||| ||||| | || ||||||||||| || ||||| Sbjct 549921 TCTTTCTGAATATTGTAGTCAGCAAGGGTTCGGCCATCTTCAAGCTGTTTTCCAGCAAAG 549862 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCC 39192 || |||||||||||||| | ||| | || || |||||| Sbjct 549861 ATCAGACGCTGCTGGTCAGGGGGGATGCCTTCCTTGTCC 549823 >seq452168 Length=246641 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/196 (70%), Gaps = 6/196 (3%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || ||||||||||| || || || | || || ||||| || |||||||| Sbjct 90498 CTCCTTCTGAATGTTATAATCGGCCAGAGTACGCCCATCTTCCAGCTGCTTTCCCGCAAA 90439 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || | ||||||||| | || | | |||||||||| ||| || || | | Sbjct 90438 GATCAGCCTCTGCTGGTCAGGAGGGATCCCCTCTTTGTCCTGGATCTTGGCCTTCACATT 90379 Query 39213 CGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTT 39269 | | ||||| ||| ||| || |||| || || ||||||| ||||| ||||| Sbjct 90378 ATCAATGGTATCTGAGCT---CTCAACCTCCAGGGTAATGGTTTTTCCAGTCAGAGTTTT 90322 Query 39270 AACAAAGATTTGCATC 39285 |||||||| |||||| Sbjct 90321 CACAAAGATCTGCATC 90306 >seq1532893 Length=286854 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 || || || || ||||||||||| || ||||| | || || |||||||| || |||||| Sbjct 40013 TCCTTCTGGATGTTATAATCGGCCAGAGTTCGCCCATCCTCCAGCTGTTTACCAGCAAAT 40072 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTC 39213 || || | |||||| || | || | | || |||||| |||||| ||| | | Sbjct 40073 ATGAGCCTCTGCTGATCAGGAGGAATCCCTTCCTTGTCCTGAATTTTCGCTTTTACGTTA 40132 Query 39214 GCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACA 39273 | | ||||||| ||| || |||| |||||| | || || |||| ||| || ||| Sbjct 40133 TCAATCGTATCGGAGCTCTCAACCTCCAGTGTGATAGTCTTGCCTGTCAACGTCTTCACA 40192 Query 39274 AAGATTTGCAT 39284 || || ||||| Sbjct 40193 AATATCTGCAT 40203 >seq970285 Length=171824 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 39055 AAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCG 39114 |||||||| |||||||| || ||||| || || || || ||||| ||||||||||| Sbjct 136495 AAGCCTCCCCTTAAGCGCAAAACCAAGTGAAGAGTTGATTCCTTTTGAATATTATAATCT 136436 Query 39115 GCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC 39170 || || || || | || || |||||||| || |||||||| | |||||||| || Sbjct 136435 GCTAGAGTGCGCCCATCTTCTAGCTGTTTTCCAGCAAATATTAATCGCTGCTGATC 136380 >seq496553 Length=98900 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 |||||||| || || ||||| ||||| || ||| |||| ||||||||||| || ||||| Sbjct 47361 TCTTTTTGGATGTTGTAATCCGCAAGAGTGCGTCCGTCCTCAAGCTGTTTTCCGGCAAAA 47420 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTC 39213 || || | |||||| || ||| | || || ||||| ||||| |||| | Sbjct 47421 ATCAGCCTCTGCTGATCAAGGGGAATGCCTTCCTTGTCTTGAATTTTGGCCTTGACATTT 47480 Query 39214 GCCACCGTATC-GCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | ||||| | | | || || |||| |||||| | || || || || ||||| || Sbjct 47481 TCAAATGTATCAGAGCTA-TCGACTTCCAGAGTGATAGTCTTGCCAGTGAGGGTTTTGAC 47539 Query 39273 AAAGATTTGCAT 39284 |||||| ||||| Sbjct 47540 AAAGATCTGCAT 47551 >seq1242598 Length=100980 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || ||||||||||| || ||||| | || || |||||||| || ||||| Sbjct 13835 CTCCTTCTGGATGTTATAATCGGCCAGAGTTCGCCCATCCTCCAGCTGTTTACCAGCAAA 13894 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 ||| || | |||||| || | || | | || |||||| |||||| ||| | | Sbjct 13895 TATGAGCCTCTGCTGATCAGGAGGAATCCCTTCCTTGTCCTGAATTTTCGCTTTTACATT 13954 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | ||||||| ||| || |||| |||||| | || || |||| || || || Sbjct 13955 ATCAATCGTATCGGAGCTCTCAACCTCCAGTGTGATAGTCTTGCCTGTCAAAGTCTTCAC 14014 Query 39273 AAAGATTTGCAT 39284 ||| || ||||| Sbjct 14015 AAATATCTGCAT 14026 >seq1453129 Length=93798 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/233 (68%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 || ||||| | || | || | ||| || ||| || || || || || || |||||| Sbjct 41076 CCACCTCTCAGACGGAGGACAAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCA 41135 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || ||||| |||| || ||||| || || ||||| || ||||| ||||| || | ||| Sbjct 41136 AGGGTTCGACCGTCCTCGAGCTGCTTCCCAGCAAAAATCAGACGTTGCTGATCAGGGGGG 41195 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATC---GCTCGACTCC 39234 | || || || ||| ||| || || | | | | ||||| |||| || Sbjct 41196 ATGCCTTCCTTATCCTGGATCTTGGCCTTTACATTGTCAATGGTATCAGAGCTC---TCG 41252 Query 39235 ACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287 || || | |||||| | || || || || || |||||||||||||||||||| Sbjct 41253 ACCTCGAGAGTGATAGTCTTGCCGGTTAGGGTCTTAACAAAGATTTGCATCTT 41305 >seq1394563 Length=85064 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 39055 AAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCG 39114 |||||||| |||||||| || ||||| || || || || ||||| ||||||||||| Sbjct 13502 AAGCCTCCCCTTAAGCGCAAAACCAAGTGAAGAGTTGATTCCTTTTGAATATTATAATCT 13561 Query 39115 GCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC 39170 || || || || | || || |||||||| || |||||||||| | ||||| || Sbjct 13562 GCTAGAGTGCGCACATCTTCTAGCTGTTTTCCAGCAAATATAATTCTTTGCTGATC 13617 >seq1203529 Length=127907 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 ||||| || ||||| || || ||||| ||||| | || ||||||||||| || ||||| Sbjct 124976 TCTTTCTGAATATTGTAGTCAGCAAGGGTTCGGCCATCTTCAAGCTGTTTTCCAGCAAAG 124917 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCC 39192 || |||||||||||||| | ||| | || || |||||| Sbjct 124916 ATCAGACGCTGCTGGTCAGGGGGGATGCCTTCCTTGTCC 124878 >seq728553 Length=135983 Score = 82.4 bits (90), Expect = 6e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 || || |||||||| ||||| ||||||||||| |||| ||||| ||||| || ||||| Sbjct 38659 TCCTTCTGTATATTGTAATCAGCAAGTGTTCGCCCGTCTTCAAGTTGTTTTCCGGCAAAG 38600 Query 39154 ATAAGACGCTGCTGGTCGGTGGG 39176 || ||| |||||||||| | ||| Sbjct 38599 ATCAGAGGCTGCTGGTCAGGGGG 38577 >seq512796 Length=133765 Score = 82.4 bits (90), Expect = 6e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 || || |||||||| ||||| |||||||||| |||| ||||| ||||| || ||||| Sbjct 90084 TCCTTCTGTATATTGTAATCAGCAAGTGTTCACCCGTCTTCAAGTTGTTTTCCGGCAAAG 90143 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTC 39213 || |||| || ||||| | ||| | | || |||||| ||| || || | ||| Sbjct 90144 ATCTGACGTTGTTGGTCAGGGGGAATTCCTTCCTTGTCCTGGATCTTGCCCTTAA-CGTT 90202 Query 39214 GCCACCG-TATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | || | | ||| ||| || |||| ||| || | || || || || |||||||| Sbjct 90203 GTCAATGGTGTCGGAGCTCTCAACTTCCAACGTTATTGTCTTCCCAGTGAGGGTTTTAAC 90262 Query 39273 AAAGATTTGCAT 39284 ||| || ||||| Sbjct 90263 AAATATCTGCAT 90274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420329417799632