Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinus_20taeda_20[genbank_20GCA_5F000404065.3_202017-01-09] 1,760,464 sequences; 22,103,635,615 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq224353 82.4 6e-11 >seq224353 Length=132916 Score = 82.4 bits (90), Expect = 6e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 4728 ATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTA 4787 ||||| || | ||||| | ||||||| | || |||||||| | || || || Sbjct 9260 ATCCAGTTGAGAGCCCAATCTTCTTTTTTTGCCAAACAAGGAATTGTCTCAATTGCATTG 9201 Query 4788 AATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATT 4847 |||| | | | ||||| || |||| | ||| || || | |||| |||||||| Sbjct 9200 AATAGGTGATTATTTTCCTTAGGATCTTTGACATATGTTTCCAACAGTAAACTATACATC 9141 Query 4848 TCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAA-GCATCTAGCTTCTGTTAC 4906 || || || |||||||| || |||||||| || || ||||| ||| | ||| |||| || Sbjct 9140 TCTGAGTGAATATTTTCAATGGCAATCTGGAACCCATAAAATGCA-CGAGCCTCTGGAAC 9082 Query 4907 TTGAACTTCGTT 4918 ||||||||| || Sbjct 9081 TTGAACTTCTTT 9070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 417886971114512