Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinus_20taeda_20[genbank_20GCA_5F000404065.3_202017-01-09] 1,760,464 sequences; 22,103,635,615 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq1532893 116 3e-21 seq1106687 113 4e-20 seq1242598 107 2e-18 seq651746 107 2e-18 seq1684795 100 2e-16 seq889306 96.9 3e-15 seq790506 96.9 3e-15 seq730927 96.9 3e-15 seq74577 96.9 3e-15 seq156445 95.1 1e-14 seq1118728 91.5 1e-13 seq1486149 87.8 1e-12 seq102530 87.8 1e-12 seq217298 86.0 5e-12 seq1106782 84.2 2e-11 seq1588668 82.4 6e-11 >seq1532893 Length=286854 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| || ||||| || |||||||| ||||| || || || |||| || | | Sbjct 40203 ATGCAGATATTTGTGAAGACGTTGACAGGCAAGACTATCACACTGGAGGTTGAGAGCTCC 40144 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | |||||| |||||| ||||| ||||| |||| ||||| Sbjct 40143 GATACGATTGATAACGTAAAAGCGAAAATTCAGGACAAGGAAGGGATTCCTCCTGATCAG 40084 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || ||||| || | ||| || ||||| |||| ||| |||| ||||||||||||| Sbjct 40083 CAGAGGCTCATATTTGCTGGTAAACAGCTGGAGGATGGGCGAACTCTGGCCGATTATAAC 40024 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || || || ||||||||||| || | || ||||||||||| ||||| Sbjct 40023 ATCCAGAAGGAATCTACACTTCACCTTGTCTTGCGTCTGCGTGGTGG 39977 >seq1106687 Length=18734 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| || ||||| || |||||||| ||||| || || || |||| || | Sbjct 13277 ATGCAGATATTTGTGAAGACGTTGACAGGCAAGACTATCACACTGGAGGTTGAGAGTTCC 13336 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | |||||| |||||| ||||| ||||| |||| |||||| Sbjct 13337 GATACGATTGATAATGTAAAAGCGAAAATTCAGGACAAGGAAGGGATTCCTCCCGATCAG 13396 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || ||||| || | ||| || ||||| |||| ||| |||| ||||||||||||| Sbjct 13397 CAGAGGCTCATATTTGCTGGTAAACAGCTGGAGGATGGGCGAACTCTGGCCGATTATAAC 13456 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || || || || |||||||| || | || ||||||||||| ||||| Sbjct 13457 ATCCAGAAGGAGTCTACACTTCACCTTGTCTTGCGTCTGCGTGGTGG 13503 >seq1242598 Length=100980 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| || ||||| || || ||||| ||||| || || || |||| || | | Sbjct 14026 ATGCAGATATTTGTGAAGACTTTGACAGGCAAGACTATCACACTGGAGGTTGAGAGCTCC 13967 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | |||||| |||||| ||||| ||||| |||| ||||| Sbjct 13966 GATACGATTGATAATGTAAAAGCGAAAATTCAGGACAAGGAAGGGATTCCTCCTGATCAG 13907 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || ||||| || | ||| || ||||| |||| ||| |||| ||||||||||||| Sbjct 13906 CAGAGGCTCATATTTGCTGGTAAACAGCTGGAGGATGGGCGAACTCTGGCCGATTATAAC 13847 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || || || || |||||||| || | || ||||||||||| ||||| Sbjct 13846 ATCCAGAAGGAGTCTACACTTCACCTTGTTTTGCGTCTGCGTGGTGG 13800 >seq651746 Length=18649 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| || ||||| || || ||||| ||||| || || || |||| || | | Sbjct 12997 ATGCAGATATTTGTGAAGACATTGACAGGCAAGACGATCACACTGGAGGTTGAGAGCTCC 13056 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | |||||| |||||| ||||| ||||| |||| |||||| Sbjct 13057 GATACGATTGATAACGTAAAAGCGAAAATTCAGGACAAGGAAGGGATTCCTCCTGATCAA 13116 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || ||||| || | ||| || || || |||| ||| | |||| ||||||| ||||| Sbjct 13117 CAGAGGCTCATATTTGCTGGTAAGCAGCTGGAGGATGGGAGAACTCTGGCCGACTATAAC 13176 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || || || || |||||||| || | || ||||||||||| ||||| Sbjct 13177 ATCCAGAAGGAGTCTACACTTCACCTTGTTTTGCGTCTGCGTGGTGG 13223 >seq1684795 Length=260646 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| || ||||| || |||||||| ||||||||||| || | || || | Sbjct 98905 ATGCAGATATTTGTGAAGACGTTGACAGGCAAAACCATCACACTAGAGGTTGAGAGCTCT 98964 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | || || || ||| ||||| ||||| |||| ||||| Sbjct 98965 GATACGATTGATAACGTGAAGGCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAG 99024 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || |||||||||| ||| ||||| || |||| ||| ||| | ||||||||||| Sbjct 99025 CAGAGGCTTATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGAACCCTCGCCGATTATAAC 99084 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGC 111327 || ||||| ||||| || || || | || ||||||||||| |||||| Sbjct 99085 ATTCAAAAGGAATCCACTCTTCACCTTGTCTTGCGTCTGCGTGGTGGC 99132 >seq889306 Length=17287 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| || ||||| || |||||||| ||||||||||| || | || || | Sbjct 10776 ATGCAGATATTTGTGAAGACGTTGACAGGCAAAACCATCACACTAGAGGTTGAGAGCTCT 10717 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | || || || ||| ||||| ||||| |||| ||||| Sbjct 10716 GATACGATTGATAACGTGAAGGCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAG 10657 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || ||||| |||| ||| ||||| || |||| ||| ||| | ||||||||||| Sbjct 10656 CAGAGGCTCATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGAACCCTCGCCGATTATAAC 10597 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGC 111327 || ||||| ||||| || || || | || ||||||||||| |||||| Sbjct 10596 ATTCAAAAGGAATCCACCCTCCACCTTGTCTTGCGTCTGCGTGGTGGC 10549 >seq790506 Length=27146 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| || ||||| || |||||||| ||||||||||| || | || || | Sbjct 21645 ATGCAGATATTTGTGAAGACGTTGACAGGCAAAACCATCACACTAGAGGTTGAGAGCTCT 21586 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | || || || ||| ||||| ||||| |||| ||||| Sbjct 21585 GATACGATTGATAACGTGAAGGCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAG 21526 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || ||||| |||| ||| ||||| || |||| ||| ||| | ||||||||||| Sbjct 21525 CAGAGGCTCATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGAACCCTCGCCGATTATAAC 21466 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGC 111327 || ||||| ||||| || || || | || ||||||||||| |||||| Sbjct 21465 ATTCAAAAGGAATCCACCCTCCACCTTGTCTTGCGTCTGCGTGGTGGC 21418 >seq730927 Length=2450 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| || ||||| || |||||||| ||||||||||| || | || || | Sbjct 482 ATGCAGATATTTGTGAAGACGTTGACAGGCAAAACCATCACACTAGAGGTTGAGAGCTCT 423 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | || || || ||| ||||| ||||| |||| ||||| Sbjct 422 GATACGATTGATAACGTGAAGGCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAG 363 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || ||||| |||| ||| ||||| || |||| ||| ||| | ||||||||||| Sbjct 362 CAGAGGCTCATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGAACCCTCGCCGATTATAAC 303 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGC 111327 || ||||| ||||| || || || | || ||||||||||| |||||| Sbjct 302 ATTCAAAAGGAATCCACCCTCCACCTTGTCTTGCGTCTGCGTGGTGGC 255 >seq74577 Length=219802 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| || ||||| || |||||||| ||||| ||||| || | || || | Sbjct 103843 ATGCAGATATTTGTGAAGACGTTGACAGGCAAGACCATCACACTAGAGGTTGAGAGCTCT 103902 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | || || || ||| ||||| ||||| |||| ||||| Sbjct 103903 GATACGATTGATAATGTGAAGGCTAAGATTCAAGACAAGGAAGGGATTCCTCCTGATCAG 103962 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || ||||| |||| ||| ||||| || |||| ||| ||| | ||||||||||| Sbjct 103963 CAGAGGCTCATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGAACCCTCGCCGATTATAAC 104022 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGC 111327 || ||||| |||||||| || || | || ||||||||||| |||||| Sbjct 104023 ATTCAAAAGGAATCTACCCTCCACCTTGTCTTGCGTCTGCGTGGTGGC 104070 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| || ||||| || ||||| || ||||| ||||| || |||| || | Sbjct 135522 ATGCAGATATTTGTGAAGACGTTAACAGGCAAGACCATCACACTGGAGGTTGAGAGCTCT 135581 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | | || || || ||| ||||| ||||| |||| ||||| Sbjct 135582 GATACGATTGACAACGTGAAGGCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAG 135641 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || ||||| |||| ||| || || || |||| ||| ||| | ||||||||||| Sbjct 135642 CAGAGGCTCATTTTTGCCGGGAAGCAGCTGGAGGATGGCCGAACACTCGCCGATTATAAC 135701 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGC 111327 || || || ||||| || || || | || |||||||||||||||||| Sbjct 135702 ATCCAGAAGGAATCCACCCTCCACCTTGTCTTGCGTCTGCGCGGTGGC 135749 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 |||||| || ||||||||||| | || ||||| ||||| ||| ||||| ||| | Sbjct 102930 AATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACCATCACCTTGGAAGTCGAAAGCTC 102989 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 || | ||| | | || || |||||| ||||| ||||| |||| |||||| Sbjct 102990 TGACACAATTGACAATGTGAAGTCTAAAATTCAAGACAAGGAAGGGATTCCACCCGATCA 103049 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 || ||||| || | ||| || |||||| | || ||| ||| | |||||||| || Sbjct 103050 GCAGAGGCTGATCTTTGCTGGAAAACAACTCGAGGATGGACGCACTCTTGCCGATTACAA 103109 Query 111279 TATACAAAAAGAATCTACACTACA 111302 ||| || || ||||| || || || Sbjct 103110 TATCCAGAAGGAATCGACTCTTCA 103133 >seq156445 Length=179060 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| || ||||| || |||||||| ||||| || || || |||| || | Sbjct 65742 ATGCAGATATTTGTGAAGACGTTGACAGGCAAGACGATCACACTGGAGGTTGAGAGTTTC 65683 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || | ||| | ||||| |||||| ||||| ||||| |||| ||||| Sbjct 65682 AATACGATTGATAAAGTAAAGGCGAAAATTCAGGACAAGGAAGGGATTCCTCCTGATCAG 65623 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || ||||| || | ||| || |||||| |||| ||| |||| ||| ||| ||||| Sbjct 65622 CAGAGGCTCATATCTGCTGGTAAACAACTGGAGGATGGGCGAACTCTGGTCGACTATAAC 65563 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || || || || |||||||| || | || ||||||||||| ||||| Sbjct 65562 ATCCAGAAGGAGTCTACACTTCACCTTGTTTTGCGTCTGCGTGGTGG 65516 >seq1118728 Length=17451 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| || ||||| || ||||| || ||||| ||||| || |||| || | Sbjct 2477 ATGCAGATATTTGTGAAGACGTTAACAGGCAAGACCATCACACTGGAGGTTGAGAGCTCT 2536 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | | || || || ||| ||||| ||||| |||| ||||| Sbjct 2537 GATACGATTGACAACGTGAAGGCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAG 2596 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || ||||| |||| ||| || || || |||| ||| ||| | ||||||||||| Sbjct 2597 CAGAGGCTCATTTTTGCCGGGAAGCAGCTGGAGGATGGCCGAACACTCGCCGATTATAAC 2656 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGC 111327 || || || ||||| || || || | || |||||||||||||||||| Sbjct 2657 ATCCAGAAGGAATCCACCCTCCACCTTGTCTTGCGTCTGCGCGGTGGC 2704 >seq1486149 Length=44583 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| || ||||||||||| |||||||||| || || || ||||| ||| | Sbjct 26802 ATGCAGATCTTTGTCAAAACCCTGACCGGCAAGACAATCACTCTGGAAGTCGAAAGCTCT 26861 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | | || || |||||| ||||| ||||| |||| |||||| Sbjct 26862 GATACAATTGACAATGTCAAGGCTAAAATTCAAGACAAGGAAGGGATTCCACCCGATCAG 26921 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || ||||| || | ||| || |||||| | || ||| ||| | |||||||| ||| Sbjct 26922 CAGAGGCTGATCTTTGCTGGGAAACAACTCGAGGATGGACGCACTCTCGCCGATTACAAT 26981 Query 111280 ATACAAAAAGAATCTACACTACA 111302 || || || ||||| || || || Sbjct 26982 ATCCAGAAGGAATCGACTCTTCA 27004 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAA-CG-GAACCCA 111157 ||||| || ||||||||||| |||||||||| || || || | ||| || || | || Sbjct 27030 ATGCAGATCTTTGTCAAAACCCTGACCGGCAAGACAATCACGCTCGAAGTCGAGAGCTCA 27089 Query 111158 GCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATC 111217 | | || ||| | || || || ||| || ||||| || |||| |||| Sbjct 27090 GACA--CTATTGATAACGTGAAGGCGAAGATTCAGGATAAAGAGGGGATTCCTCCGGATC 27147 Query 111218 AACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 111277 |||| || | || | ||| || |||||| | |||||| | ||| | ||||| || | Sbjct 27148 AACAGAGATTGATCTTTGCAGGGAAACAACTTGAAGATGGGAGGACTCTAGCCGACTACA 27207 Query 111278 ATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 | || ||||| ||||||||||| ||| | || | || || |||||||| Sbjct 27208 ACATTCAAAAGGAATCTACACTGCATCTTGTCCTTCGCCTCCGCGGTGG 27256 >seq102530 Length=63980 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| || ||||||||||| |||||||||| || || || ||||| ||| | Sbjct 3915 ATGCAGATCTTTGTCAAAACCCTGACCGGCAAGACAATCACTCTGGAAGTCGAAAGCTCT 3974 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | | || || |||||| ||||| ||||| |||| |||||| Sbjct 3975 GATACAATTGACAATGTCAAGGCTAAAATTCAAGACAAGGAAGGGATTCCACCCGATCAG 4034 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || ||||| || | ||| || |||||| | || ||| ||| | |||||||| ||| Sbjct 4035 CAGAGGCTGATCTTTGCTGGGAAACAACTCGAGGATGGACGCACTCTCGCCGATTACAAT 4094 Query 111280 ATACAAAAAGAATCTACACTACA 111302 || || || ||||| || || || Sbjct 4095 ATCCAGAAGGAATCGACTCTTCA 4117 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAA-CG-GAACCCA 111157 ||||| || ||||||||||| |||||||||| || || || | ||| || || | || Sbjct 56422 ATGCAGATCTTTGTCAAAACCCTGACCGGCAAGACAATCACGCTCGAAGTCGAGAGCTCA 56481 Query 111158 GCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATC 111217 | | || ||| | || || || ||| || ||||| || |||| |||| Sbjct 56482 GACA--CTATTGATAACGTGAAGGCGAAGATTCAGGATAAAGAGGGGATTCCTCCGGATC 56539 Query 111218 AACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 111277 |||| || | || | ||| || |||||| | |||||| | ||| | ||||| || | Sbjct 56540 AACAGAGATTGATCTTTGCAGGGAAACAACTTGAAGATGGGAGGACTCTCGCCGACTACA 56599 Query 111278 ATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 | || ||||| ||||||||||| ||| | || | || || |||||||| Sbjct 56600 ACATTCAAAAGGAATCTACACTGCATCTTGTCCTTCGCCTCCGCGGTGG 56648 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| || ||||||||||| |||||||||| || || || ||||| ||| | Sbjct 56194 ATGCAGATCTTTGTCAAAACCCTGACCGGCAAGACAATCACTCTGGAAGTCGAAAGCTCT 56253 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | | || || |||||| ||||| ||||| |||| |||||| Sbjct 56254 GATACAATTGACAATGTCAAGGCTAAAATTCAAGACAAGGAAGGGATTCCACCCGATCAG 56313 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || ||||| || | ||| || |||||| | || ||| ||| | |||||||| || Sbjct 56314 CAGAGGCTGATCTTTGCTGGAAAACAACTCGAGGATGGACGCACTCTCGCCGATTACAAC 56373 Query 111280 ATACAAAAAGAATCTACACTACA 111302 || || || ||||| || || || Sbjct 56374 ATCCAGAAGGAATCGACTCTTCA 56396 >seq217298 Length=49640 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| || ||||| || || ||||| ||||| || || || |||| || | Sbjct 19506 ATGCAGATATTTGTGAATACATTGACAGGCAAGACGATCACACTGGAGGTTGAGAGCTTT 19565 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | || | | |||||| |||||| ||||| ||||| |||| ||||| Sbjct 19566 GATACAGTCGATAATGTAAAAGCGAAAATTCAGGACAAGGAAGGGATTCCTCCTGATCAG 19625 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 | ||||| || | ||| || ||||| |||| ||| |||| |||| |||||||| Sbjct 19626 TAGAGGCTCATATTTGCCGGTAAACAGCTGGAGGATGGGCGAACTCTGGCTGATTATAAC 19685 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || | || || |||||||| || | | ||||||||||| ||||| Sbjct 19686 ATCCGGAAGGAGTCTACACTTCACCTTATCTTGCGTCTGCGTGGTGG 19732 >seq1106782 Length=21075 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAA-CG-GAACCCA 111157 ||||| || ||||||||||| |||||||||| || || || | ||| || || | || Sbjct 4142 ATGCAGATCTTTGTCAAAACCCTGACCGGCAAGACAATCACGCTCGAAGTCGAGAGCTCA 4201 Query 111158 GCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATC 111217 | | || ||| | || || || ||| || ||||| || |||| |||| Sbjct 4202 GACA--CTATTGATAACGTGAAGGCGAAGATTCAGGATAAAGAGGGGATTCCTCCGGATC 4259 Query 111218 AACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 111277 |||| || | || | ||| || |||||| | |||||| | ||| | ||||| || | Sbjct 4260 AACAGAGATTGATCTTTGCAGGGAAACAACTTGAAGATGGGAGGACTCTAGCCGACTACA 4319 Query 111278 ATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 | || ||||| ||||||||||| ||| | || | || || |||||||| Sbjct 4320 ACATTCAAAAGGAATCTACACTGCATCTTGTCCTTCGCCTCCGCGGTGG 4368 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| || ||||||||||| |||||||||| || || || ||||| ||| | Sbjct 3914 ATGCAGATCTTTGTCAAAACCCTGACCGGCAAGACAATCACTCTGGAAGTCGAAAGCTCT 3973 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | | || || |||||| ||||| ||||| |||| |||||| Sbjct 3974 GATACAATTGACAATGTCAAGGCTAAAATTCAAGACAAGGAAGGGATTCCACCCGATCAG 4033 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || ||||| || | ||| || |||||| | || ||| ||| | |||||||| || Sbjct 4034 CAGAGGCTGATCTTTGCTGGAAAACAACTCGAGGATGGACGCACTCTCGCCGATTACAAC 4093 Query 111280 ATACAAAAAGAATCTACACTACA 111302 || || || ||||| || || || Sbjct 4094 ATCCAGAAGGAATCGACTCTTCA 4116 >seq1588668 Length=25065 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||| ||||| ||||| | || || ||||||||||| ||||| |||| | Sbjct 17267 ATGCAAATCTTTGTGAAAACCCTTACAGGTAAAACCATTACTCTGGAAGTGGAAAGCTCG 17208 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || | ||| | | || || || || ||||| || || |||| || || Sbjct 17207 GACACCATTGACAATGTGAAGGCTAAGATCCAGGACAAGGAGGGAATTCCACCTGACCAG 17148 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || ||| | || | ||| || || || |||||||| | ||| |||||||||| ||| Sbjct 17147 CAGAGGTTGATCTTTGCCGGTAAGCAGCTGGAAGATGGTCGTACTCTGGCCGATTACAAT 17088 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGC 111327 || || || ||||| || || || | ||| | ||||| || |||||| Sbjct 17087 ATTCAGAAGGAATCGACCCTTCACCTGGTGCTCCGTCTCCGTGGTGGC 17040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412760964417664