Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudotsuga_20menziesii_20[genbank_20GCA_5F001517045.1_202015-12-22] 1,236,665 sequences; 14,673,225,455 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq300714 87.8 1e-12 >seq300714 Length=404136 Score = 87.8 bits (96), Expect = 1e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 19002 CAGTTTTACGTTGCAAACGGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATG 19061 |||||||| || ||||| || ||||| || || || | |||||| | || | || ||| Sbjct 34601 CAGTTTTATGTAGCAAAAGGGGAATTGTCATGTCAGATGTACCAGCGTTCCTGTGACATG 34542 Query 19062 GGCCTTGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCAT 19121 ||||| || ||||| ||||||||||| |||||||||| | || | ||| | || ||| Sbjct 34541 GGCCTCGGTGTACCTTTCAACATTGCATCATATGCACTTTTAACATGCATGATTGCTCAT 34482 Query 19122 GTT 19124 ||| Sbjct 34481 GTT 34479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 393482733764925