Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudotsuga_20menziesii_20[genbank_20GCA_5F001517045.1_202015-12-22] 1,236,665 sequences; 14,673,225,455 total letters Query= NC_002667.1 Length=41834 Score E Sequences producing significant alignments: (Bits) Value seq927542 309 8e-80 >seq927542 Length=455 Score = 309 bits (342), Expect = 8e-80 Identities = 200/219 (91%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 14418 GATATTAACGCACATAAACTTGCTGAAAATGGGAAATCTGTGAGAACATCAGCATATTGG 14477 ||||| ||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct 453 GATATCAACGCACATAAACTTGCTGAAAATGGGAACTCTGTGAGAACGTCAGCACATTGG 394 Query 14478 AAATCAGTAGGAAATGCAGAGTTTTACATTAAAGAGATTTACCCAAAGTTGAGCACTTTA 14537 |||||||||||||||||||||||||| ||||||||||| |||| |||||| | || || Sbjct 393 AAATCAGTAGGAAATGCAGAGTTTTATATTAAAGAGATGTACCAAAAGTTAGACGCTCTA 334 Query 14538 GCAGAAATTGATAGGCTTTTCCATTGGTCGGATCATTTACATCAAGAACAATTAAAATTT 14597 |||||||||||||| || ||||||||||| || |||||||||||||||||| |||||| Sbjct 333 GCAGAAATTGATAGACTATTCCATTGGTCAAGTCGTTTACATCAAGAACAATTGAAATTT 274 Query 14598 GTTAGTAAATATCCCAAAGTTATGGAAAAATACAGACAA 14636 ||||||||||||||||||||||||||||||||||||||| Sbjct 273 GTTAGTAAATATCCCAAAGTTATGGAAAAATACAGACAA 235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 131783069287080