Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudotsuga_20menziesii_20[genbank_20GCA_5F001517045.1_202015-12-22] 1,236,665 sequences; 14,673,225,455 total letters Query= NC_002796.1 Length=40003 Score E Sequences producing significant alignments: (Bits) Value seq927542 300 4e-77 >seq927542 Length=455 Score = 300 bits (332), Expect = 4e-77 Identities = 207/234 (88%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 37301 CTGATATCAACGCACAAAAACTTGCTGAAAACGGGAATACAGTTAGAACATCAGCACACT 37360 |||||||||||||||| |||||||||||||| ||||| | || ||||| |||||||| | Sbjct 455 CTGATATCAACGCACATAAACTTGCTGAAAATGGGAACTCTGTGAGAACGTCAGCACATT 396 Query 37361 GGAAATCAGTAGGAAATGCAGAGTTTTACATTAAAGAGATTTACGAAAAGTTGAGTGCTT 37420 |||||||||||||||||||||||||||| ||||||||||| ||| ||||||| ||| Sbjct 395 GGAAATCAGTAGGAAATGCAGAGTTTTATATTAAAGAGATGTACCAAAAGTTAGACGCTC 336 Query 37421 TAGCTGAAATTGATAGACTTTTCCATTGGTCTAGCCATTTACATCAAGAACGATTACAAT 37480 |||| |||||||||||||| ||||||||||| || | |||||||||||||| ||| ||| Sbjct 335 TAGCAGAAATTGATAGACTATTCCATTGGTCAAGTCGTTTACATCAAGAACAATTGAAAT 276 Query 37481 TTGTTAGTAAATATCCAAATGTTATGGAAAAATACAGACAAGCAAACTAAGGAG 37534 |||||||||||||||| || ||||||||||||||||||||| |||||||||||| Sbjct 275 TTGTTAGTAAATATCCCAAAGTTATGGAAAAATACAGACAATCAAACTAAGGAG 222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126009913964450