Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudotsuga_20menziesii_20[genbank_20GCA_5F001517045.1_202015-12-22] 1,236,665 sequences; 14,673,225,455 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq265356 105 7e-18 seq304998 100 3e-16 seq172461 100 3e-16 seq679059 98.7 1e-15 seq842679 96.9 3e-15 seq878211 91.5 1e-13 seq307481 91.5 1e-13 seq1122789 89.7 5e-13 seq16451 89.7 5e-13 seq277093 87.8 2e-12 seq810261 86.0 6e-12 seq114939 86.0 6e-12 seq403402 84.2 2e-11 seq996803 82.4 8e-11 seq458253 82.4 8e-11 seq434543 82.4 8e-11 >seq265356 Length=295507 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | |||||| || | ||||| |||||| || || || |||||||||||| Sbjct 165700 CCACCACGCAGACGCAAGACGAGATGAAGTGTAGACTCCTTCTGGATGTTGTAATCGGCG 165641 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || | | || || || ||||| |||||| |||||| | |||||||| ||||| Sbjct 165640 AGAGTTCGCCCATCCTCCAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGATCAGGAGGA 165581 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||| ||||| ||| || ||||| | || | ||| || | | || || Sbjct 165580 ATTCCTTCCTTGTCCTGAATCTTCGCTTTTACATTATCGATCGTATCAGAGCTCTCAACC 165521 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | || | |||||||| ||||| || || || ||||| |||||| Sbjct 165520 TCCAGTGTGATGGTCTTGCCTGTCAACGTCTTCACAAATATCTGCATA 165473 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||||| | ||| | || | ||||| || ||||| ||||| |||||||||||| Sbjct 165244 CCTCCTCTGAGACGGAGGACAAGATGAAGAGTCGATTCCTTTTGGATGTTGTAATCGGCA 165185 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| ||| |||||||| || |||||| |||||| | ||||||||||| || Sbjct 165184 AGAGTGCGTCCGTCCTCGAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGATCGGGTGGA 165125 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || || || || || |||||| || | | || | |||||| | | || ||| Sbjct 165124 ATCCCCTCCTTATCTTGAATTTTGGCCTTAACATTGTCAATCGTGTCAGAGCTCTCAACT 165065 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | ||| | |||||||| |||| ||||| || || || ||||| Sbjct 165064 TCCAGAGTAATGGTCTTGCCAGTCAGGGTTTTAACAAAGATCTGCAT 165018 >seq304998 Length=937332 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 ||| |||| || || | || | ||| | || ||||| ||||| || || ||||| Sbjct 714659 GCCACCTCTCAACCGGAGGACAAGATGCAGGGTGGATTCCTTTTGGATATTATAATCAGC 714600 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | || | ||||||||| || || ||||| |||||||||| |||||||| || || Sbjct 714599 AAGGGTTCGGCCGTCTTCGAGCTGCTTCCCAGCGAAGATCAGACGCTGCTGATCAGGGGG 714540 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 |||||||||||||| || || ||| | | || | ||||||| | || || Sbjct 714539 AATGCCTTCTTTGTCCTGGATCTTGGCTTTGACGTTGTCAATGGTGTCCGAGCTCTCAAC 714480 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||| | ||| | ||||||||| || | |||||| || || || ||||| Sbjct 714479 TTCCAAAGTGATCGTCTTGCCAGTGAGTGTTTTAACAAAGATCTGCAT 714432 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 ||| |||| || || | || | ||| | || ||||| ||||| || || ||||| Sbjct 805933 GCCACCTCTCAACCGGAGGACAAGATGCAGGGTGGATTCCTTTTGGATATTATAATCAGC 805874 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | || | ||||||||| || || ||||| |||||||||| |||||||| || || Sbjct 805873 AAGGGTTCGGCCGTCTTCGAGCTGCTTCCCAGCGAAGATCAGACGCTGCTGATCAGGGGG 805814 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 |||||||||||||| || || ||| | | || | ||||||| | || || Sbjct 805813 AATGCCTTCTTTGTCCTGGATCTTGGCTTTGACGTTGTCAATGGTGTCCGAGCTCTCAAC 805754 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||| | ||| | ||||||||| || | |||||| || || || ||||| Sbjct 805753 TTCCAAAGTGATCGTCTTGCCAGTGAGTGTTTTAACAAAGATCTGCAT 805706 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 || ||||| || || || ||||||||| | || | ||| ||||| || || || Sbjct 595629 GTGGATTCCTTCTGGATATTGTAATCGGCAAGGGTTCGGCCGTCCTCGAGCTGCTTTCCT 595570 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 ||| |||||||||||||||| ||||| || || ||||| ||||| || || || Sbjct 595569 GCAAAGATCAGACGTTGCTGGTCGGGGGGGATCCCTTCCTTGTCCTGGATCTTAGCCTTA 595510 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | | || | ||||| | | || || || | ||| | |||||||||||||| ||| Sbjct 595509 ACATTATCGATGGTGTCAGAGCTCTCGACCTCGAGAGTGATGGTCTTGCCGGTCAAGGTT 595450 Query 143168 TTTACGAATATTTGCAT 143184 || || || || ||||| Sbjct 595449 TTGACAAAAATCTGCAT 595433 >seq172461 Length=351322 Score = 100 bits (110), Expect = 3e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 142968 AACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCG 143027 ||||||| || | || || |||||||| || || ||||||||||| || ||| | Sbjct 35540 AACGCAAGACAAGGTGGATGGTAGATTCCTTCTGAATGTTGTAATCAGCCAGTGTTCGGC 35599 Query 143028 AGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTT 143087 || || || || || |||||| | || || | |||||||| ||||| |||||||||| Sbjct 35600 CATCCTCCAGCTGCTTGCCAGCAAAAATAAGCCTTTGCTGATTAGGAGGAATGCCTTCTT 35659 Query 143088 TGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCA 143147 |||| |||||| || | | ||| | || || | | || || || | || | Sbjct 35660 TGTCTTGAATTTTCGCCTTCACATTTTCAATCGCATCAGAGCTCTCAACCTCCAGTGTGA 35719 Query 143148 CCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 | |||| || |||||||| ||||| ||||| |||||| Sbjct 35720 TCATCTTACCCGTCAATGTCTTTACAAATATCTGCATA 35757 >seq679059 Length=136279 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||||| | ||| | ||| | |||| ||| ||||| || || |||||||||||| Sbjct 120279 CCTCCTCTGAGACGGAGAACAAGGTGAAGTGTCGATTCCTTCTGAATGTTGTAATCGGCA 120220 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | |||| || | || ||||||||||| || ||| |||||| | |||||||||| || Sbjct 120219 AGAGTGCGTCCA-TCCTCGAGTTGTTTTCCGGCAAAGATCAACCTCTGCTGATCGGTTGG 120161 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || || |||||||| |||||| ||| | | || | || || | | || || Sbjct 120160 AATCCCCTCTTTGTCTTGAATTTTAGCTTTGACATTCTCAATTGTATCGGAGCTCTCAAC 120101 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||| | ||| | |||||||| || | ||||| || || || ||||| Sbjct 120100 TTCCAGAGTGATGGTCTTGCCAGTAAGGGTTTTGACAAAGATCTGCAT 120053 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 142969 ACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCG 143027 ||| | ||| | |||| ||| ||||| || || |||||||||||| | |||| || Sbjct 54712 ACGGAGAACAAGGTGAAGTGTCGATTCCTTCTGAATGTTGTAATCGGCAAGAGTGCGTCC 54653 Query 143028 AGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTT 143087 | || ||||||||||| || ||| |||||| | |||||||||| || || || |||| Sbjct 54652 A-TCCTCGAGTTGTTTTCCGGCAAAGATCAACCTCTGCTGATCGGTTGGAATCCCCTCTT 54594 Query 143088 TGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCA 143147 |||| |||||| ||| | | || | || || | | || ||||| | ||| | Sbjct 54593 TGTCTTGAATTTTAGCTTTGACATTCTCAATTGTATCGGAGCTCTCAACTTCCAGAGTGA 54534 Query 143148 CCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||||||| || | ||||| || || || ||||| Sbjct 54533 TGGTCTTGCCAGTAAGGGTTTTGACAAAGATCTGCAT 54497 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 |||||||| || | |||||||||||| || || ||| ||||| ||||| || ||| Sbjct 120477 GTAGATTCCTTCTAAATGTTGTAATCGGCCAGAGTCCTCCCATCTTCAAGTTGCTTTCCA 120418 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 ||| |||||| | |||||||| ||||| || || || || || ||| || || Sbjct 120417 GCAAAGATCAATCTCTGCTGATCCGGAGGAATTCCCTCCTTATCCTGAATCTTGGCCTTC 120358 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | | || | ||||| | | || ||||||| || | |||||||| |||| ||| Sbjct 120357 ACATTATCAATAGTGTCGGAGCTCTCAACTTCAAGCGTGATGGTCTTGCCCGTCAGCGTT 120298 Query 143168 TTTACGAATATTTGCAT 143184 || || || |||||||| Sbjct 120297 TTGACAAAGATTTGCAT 120281 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/227 (69%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || |||||||| || | || | |||||||| || || ||||||||||| Sbjct 120790 CCACCACGCAAACGCAAGACAAGGTGGAGGGTAGATTCCTTCTGAATGTTGTAATCAGCA 120731 Query 143018 ATTGTGCTCGAG--TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 143075 | || |||| || || || || || |||||| | || || | ||||||||| ||| Sbjct 120730 AGAGT--TCGACCATCCTCCAGCTGCTTGCCAGCAAAAATAAGCCTTTGCTGATCAGGAA 120673 Query 143076 GTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTA 143135 | |||||||||||||| |||||| || | | || | ||| || | | || | Sbjct 120672 GAATGCCTTCTTTGTCCTGAATTTTAGCCTTCACATTATCAATCGTATCAGAGCTCTCAA 120613 Query 143136 CTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGC 143182 | || | || | |||||| || |||| || || |||||||||||| Sbjct 120612 CCTCCAGTGTGATCGTCTTACCCGTCAGCGTCTTAACGAATATTTGC 120566 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||||| | ||| | ||| | |||| ||| ||||| || || ||||||||||| Sbjct 54495 CCTCCTCTGAGACGGAGAACAAGGTGAAGTGTCGATTCCTTCTGGATGTTGTAATCCGCA 54436 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| ||| ||||| ||||| || ||| |||||| | ||||||||||| || Sbjct 54435 AGAGTGCGTCCGTCCTCGAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGATCGGGTGGA 54376 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || || || ||||| |||||| || | | || | ||||| | | || ||| Sbjct 54375 ATCCCCTCCTTGTCTTGAATTTTACCCTTGACATTGTCAATTGTGTCAGAGCTCTCAACT 54316 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | || | |||||||| || | ||||| || || || ||||| Sbjct 54315 TCGAGAGGGATGGTCTTGCCAGTAAGGGTTTTGACAAAGATCTGCAT 54269 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/227 (68%), Gaps = 1/227 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| | ||| | |||| |||| ||| ||||| || || |||||||| || Sbjct 119439 CCACCTCTGAGACGAAGGACTAGGTGAAGTGTCGATTCCTTCTGGATGTTGTAGTCCGCA 119380 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| ||| ||||| ||||| |||||| |||||| | ||||||||||| || Sbjct 119379 AGAGTGCGTCCGTCCTCGAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGATCGGGTGGA 119320 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || || |||||||| ||| || || | | || | ||||| | | || ||| Sbjct 119319 ATTCCCTCTTTGTCTTGAATCTTAGCCTTCACATTATCAATTGTGTCAGAGCTCTCAACT 119260 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | ||| | |||||||| || | ||||| || || || ||||| Sbjct 119259 TCCA-AGTGATGGTCTTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 119214 >seq842679 Length=263869 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || |||||||| || | || | |||||||| || || ||||||||||| Sbjct 131220 CCACCACGCAAACGCAAGACAAGGTGGAGGGTAGATTCCTTCTGAATGTTGTAATCAGCA 131279 Query 143018 ATTGTGCTCGAG--TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 143075 | ||| |||| || || || || || |||||| | || || | || ||||| || | Sbjct 131280 AGTGT--TCGACCATCCTCAAGCTGCTTGCCAGCAAAAATAAGCCTCTGTTGATCAGGTG 131337 Query 143076 GTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTA 143135 | |||||||||||||| |||||| || | | || | ||| || | | || | Sbjct 131338 GAATGCCTTCTTTGTCCTGAATTTTAGCCTTCACATTATCAATCGTATCAGAGCTCTCAA 131397 Query 143136 CTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||||| || | ||||||||||||| ||||| || || |||||||| Sbjct 131398 CTTCAAGCGTGATGGTCTTGCCGGTCAGCGTTTTGACAAAGATTTGCAT 131446 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||||| | ||| | ||| | |||| ||| ||||| || || ||||||||||| Sbjct 131904 CCTCCTCTGAGACGGAGAACAAGGTGAAGTGTCGATTCCTTCTGGATGTTGTAATCAGCA 131963 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| ||| || || ||||| || ||| |||||| | ||||| ||||| || Sbjct 131964 AGAGTGCGGCCGTCCTCAAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGGTCGGGTGGA 132023 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || || |||||||| |||||| || | | || | ||||| | | || ||| Sbjct 132024 ATCCCCTCTTTGTCTTGAATTTTGGCCTTAACATTATCAATTGTGTCAGAGCTCTCAACT 132083 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCT 143188 || | ||| | || ||||| || | ||||| ||||| || |||||| || Sbjct 132084 TCCAGAGTGATGGTTTTGCCAGTGAGGGTTTTGACGAAGATCTGCATACCT 132134 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||||| | ||| | ||| | |||| ||| ||||| || || ||||||||||| Sbjct 131676 CCTCCTCTGAGACGTAGAACAAGGTGAAGTGTCGATTCCTTCTGGATGTTGTAATCAGCA 131735 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| | ||| || || ||||| || ||| |||||| | ||||| || || || Sbjct 131736 AGAGTGCGCCCGTCCTCTAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGGTCAGGTGGA 131795 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || || |||||||| |||||| || | | || | ||||| | | || ||| Sbjct 131796 ATCCCCTCTTTGTCTTGAATTTTGGCCTTGACATTATCAATTGTGTCAGAGCTCTCAACT 131855 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | ||| | || ||||| || | ||||| ||||| || ||||| Sbjct 131856 TCCAGAGTGATGGTTTTGCCAGTGAGGGTTTTAACGAAGATCTGCAT 131902 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||||| | ||| | ||| | |||| ||| ||||| || || ||||||||||| Sbjct 132132 CCTCCTCTGAGACGGAGAACAAGGTGAAGTGTCGATTCCTTCTGGATGTTGTAATCAGCA 132191 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| ||| ||||| ||||| || ||| |||||| | || ||||| || || Sbjct 132192 AGAGTGCGGCCGTCCTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGTTGATCAGGTGGA 132251 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || || |||||||| |||||| || | | || | ||||| | | || ||| Sbjct 132252 ATCCCCTCTTTGTCTTGAATTTTAGCCTTGACATTGTCAATGGTGTCAGAGCTCTCAACT 132311 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | ||| | |||||||| || | ||||| || || || ||||| Sbjct 132312 TCCAGAGTGATGGTCTTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 132358 >seq878211 Length=3116 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || |||| || | ||| ||||| || | || ||||||||||| |||||||| || | Sbjct 1304 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 1245 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || || |||||| | ||| ||||||||| |||||| | ||| || || || || Sbjct 1244 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 1185 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||| ||||| ||| ||| || | | || | ||||| | | ||| ||| Sbjct 1184 ATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 1125 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAA 143175 || | ||| | ||||| || ||||| || || || || Sbjct 1124 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAA 1087 >seq307481 Length=1856025 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 ||| || || | ||| | || | ||| | ||||| || || || ||||| ||||| Sbjct 1819563 GCCACCACGGAGACGAAGCACGAGATGCAGGGTAGACTCCTTCTGAATGTTATAATCCGC 1819622 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 || || ||| ||||| ||||| || || ||| |||||| | ||||||||||| || Sbjct 1819623 CAGAGTCCTCCCATCTTCAAGTTGCTTCCCTGCAAAGATCAATCTCTGCTGATCGGGGGG 1819682 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || || || ||||| ||| ||| || | | || | || || | | || || Sbjct 1819683 AATCCCCTCCTTGTCCTGAATCTTTGCCTTCACATTATCAATAGTATCGGAGCTCTCGAC 1819742 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||||| || | ||||||||||||| |||||| || || |||||||| Sbjct 1819743 TTCAAGGGTGATAGTCTTGCCGGTCAGTGTTTTCACAAAGATTTGCAT 1819790 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 |||||||| || ||||||||||| ||| | |||| ||| || | || || ||| Sbjct 1820278 GTAGATTCCTTCTGTATGTTGTAGTCGGCAAGAGTGCGTCCGTCCTCCAACTGCTTGCCA 1820337 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 ||| |||| ||||| ||||| || ||||| ||||| |||||||| || ||| || Sbjct 1820338 GCAAAGATTAGACGCTGCTGGTCTGGAGGGATGCCCTCTTTGTCCTGGATCTTTGCCTTC 1820397 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | | || | || || | | || || |||| || | ||||| || |||||||| Sbjct 1820398 ACATTATCGATGGTATCAGAGCTCTCCACCTCAAGGGTGATGGTCTTTCCAGTCAATGTC 1820457 Query 143168 TTTACGAATATTTGCATA 143185 ||||| ||||| |||||| Sbjct 1820458 TTTACAAATATCTGCATA 1820475 >seq1122789 Length=489025 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||||| | ||| | ||| | |||| ||| ||||| || || |||||||||||| Sbjct 336745 CCTCCTCTGAGACGAAGAACAAGGTGAAGTGTCGATTCCTTCTGAATGTTGTAATCGGCA 336804 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | |||| || | || ||||||||||| | ||| |||||| | ||||||||||| || Sbjct 336805 AGAGTGCGTCCA-TCCTCGAGTTGTTTTTCGGCAAAGATCAACCTCTGCTGATCGGGTGG 336863 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || || ||||||| || ||| ||| | | || | || || | | || || Sbjct 336864 AATCCCCTCTTTGTGTTGAAATTTAGCTTTGACATTCTCAATTGTATCGGAGCTCTCAAC 336923 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||| | ||| | |||||||| || | ||||| || || || ||||| Sbjct 336924 TTCCAGAGTGATGGTCTTGCCCGTAAGGGTTTTGACAAAGATCTGCAT 336971 Score = 87.8 bits (96), Expect = 2e-12 Identities = 152/219 (69%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 142969 ACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGA 143028 |||||| || | || | |||||||| || || ||||||||||| | || |||| Sbjct 336300 ACGCAAGACAAGGTGGAGGGTAGATTCCTTCTGAATGTTGTAATCAGCAAGAGT--TCGA 336357 Query 143029 G--TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCT 143086 || || || || || ||| || | || || | ||||||||| ||||| ||||||||| Sbjct 336358 CCATCCTCCAGCTGCTTGCCAACAAAAATAAGCCTTTGCTGATCAGGAGGAATGCCTTCT 336417 Query 143087 TTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTC 143146 ||||| |||||| | || | | || | ||| || | | || || || | || Sbjct 336418 TTGTCTTGAATTTTATCCTTCACATTATCAATCGTATCAGAGCTCTCAACCTCCAGTGTG 336477 Query 143147 ACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 | |||||| || |||| || || |||||||| |||||| Sbjct 336478 ATCGTCTTACCCGTCAGCGTCTTAACGAATATCTGCATA 336516 >seq16451 Length=660335 Score = 89.7 bits (98), Expect = 5e-13 Identities = 159/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 ||| |||| | ||| | ||| | ||| | |||||||| |||||||| ||||| ||| Sbjct 127989 GCCACCTCTCAGACGGAGAACAAGATGTAGGGTAGATTCCTTTTGTATATTGTAGTCGGC 128048 Query 143017 CATTGTGCTCGAG--TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 143074 | || |||| |||||||| || || || ||| |||||| ||| ||||| || || Sbjct 128049 AAGGGT--TCGACCATCTTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGCTGGTCAGGC 128106 Query 143075 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCT 143134 || ||||||||||| || || || || | | || | ||||| | | || Sbjct 128107 GGAATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTGTCAATGGTGTCTGAGCTCTCA 128166 Query 143135 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||||| | || | ||||||||| || | ||||| ||||| || ||||| Sbjct 128167 ACTTCCAATGTTATCGTCTTGCCAGTGAGGGTTTTGACGAAGATCTGCAT 128216 >seq277093 Length=401374 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 ||| |||| ||||| | || | ||| | || ||||| || || || || || ||| Sbjct 297624 GCCACCTCTCAAACGGAGGACGAGATGCAGGGTGGATTCCTTCTGAATATTATAGTCGGC 297683 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | || | ||||||||||| || || ||| |||||| ||||||||| || || || Sbjct 297684 AAGGGTTCGGCCATCTTCGAGTTGCTTTCCGGCAAAGATCAAACGTTGCTGGTCAGGGGG 297743 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 |||||||| ||||| || || || | | || | ||||||| | || || Sbjct 297744 AATGCCTTCCTTGTCCTGTATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGCTCTCAAC 297803 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||| | ||| | |||||| ||||| | ||||| ||||| || ||||| Sbjct 297804 TTCCAAAGTAATCGTCTTACCGGTGAGGGTTTTGACGAAGATCTGCAT 297851 >seq810261 Length=116169 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||||| | ||| | || | |||| || ||||| || || ||||||||||| Sbjct 97767 CCTCCTCTGAGACGGAGCACGAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGCA 97708 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| ||| ||||| ||||| || ||| |||||| | ||||| |||||||| Sbjct 97707 AGAGTGCGTCCGTCCTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGGTCGGGAGGA 97648 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || || || ||||| |||||| || | | || | || || | | || ||| Sbjct 97647 ATACCCTCCTTGTCTTGAATTTTGGCCTTCACATTGTCAATAGTATCGGAGTTCTCAACT 97588 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | || | ||||||||||||| ||||| ||||| || ||||| Sbjct 97587 TCGAGCGTGATGGTCTTGCCGGTCAGGGTTTTGACGAAGATCTGCAT 97541 >seq114939 Length=6097 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||||| | ||| | || | |||| || ||||| || | |||||||||||| Sbjct 1527 CCTCCTCTGAGACGTAGGACGAGGTGAAGAGTGGATTCCTTCTAGATGTTGTAATCGGCA 1468 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| ||| ||||| ||||| || ||| |||||| | ||||||||||| || Sbjct 1467 AGAGTGCGTCCGTCCTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCGGGTGGA 1408 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || || || ||||| |||||| || | || || | || || | | || ||| Sbjct 1407 ATACCCTCCTTGTCTTGAATTTTGGCCTTCACATGGTCAATAGTATCGGAGTTCTCAACT 1348 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | || | |||||||| |||| ||||| ||||| || ||||| Sbjct 1347 TCGAGCGTGATGGTCTTGCCAGTCAGGGTTTTGACGAAGATCTGCAT 1301 >seq403402 Length=296 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 143029 GTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 143088 ||||||||| || || |||||| |||||||||| || || || || ||||||||||| || Sbjct 102 GTCTTCGAGCTGCTTCCCAGCAAAGATCAGACGCTGTTGGTCAGGGGGTATGCCTTCCTT 161 Query 143089 GTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCAC 143148 ||| ||||| |||| | || | ||||| | || ||||| | ||| | Sbjct 162 GTCCTGGATTTTGGCCTTTACATTGTCGATGGTGTCGGAACTCTCGACTTCCAAAGTAAT 221 Query 143149 CGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||||||| || | |||||| || || || ||||| Sbjct 222 TGTCTTGCCAGTAAGTGTTTTGACAAAGATCTGCAT 257 >seq996803 Length=140400 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || ||||| ||||| | || | || | || ||||| || || ||||||||||| | Sbjct 17311 CCACCTCGCAAACGAAGCACAAGGTGCAAAGTCGATTCCTTCTGAATGTTGTAATCAGCC 17252 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || | || || || || |||||||| |||| || | ||||| || || || Sbjct 17251 AAGGTCCGGCCATCCTCCAGCTGCTTACCAGCGAAGATGAGCCTCTGCTGGTCCGGGGGA 17192 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 |||||||| ||||| || || || | | || | ||| |||| | || ||| Sbjct 17191 ATGCCTTCCTTGTCCTGGATCTTGGCCTTAACATTATCAATCGTATCCGAGCTCTCAACT 17132 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || | || | |||||||||||| | ||||| ||||| ||||||||| Sbjct 17131 TCCAAGGTGATCGTCTTGCCGGTAAGGGTTTTCACGAAGATTTGCATA 17084 >seq458253 Length=694718 Score = 82.4 bits (90), Expect = 8e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 ||||||||||| || || ||| |||||| ||||||||| || || || || ||||| ||| Sbjct 119512 TCTTCGAGTTGCTTTCCGGCAAAGATCAAACGTTGCTGGTCAGGGGGAATACCTTCCTTG 119571 Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149 || || || || | | || | ||||| | | || ||||| | ||| | | Sbjct 119572 TCCTGTATCTTGGCCTTCACGTTGTCTATGGTGTCTGAGCTCTCAACTTCCAAAGTAATC 119631 Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||||||||||| | ||||| ||||| || ||||| Sbjct 119632 GTCTTGCCGGTGAGGGTTTTGACGAAGATCTGCAT 119666 >seq434543 Length=395133 Score = 82.4 bits (90), Expect = 8e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 |||||| | | ||| | ||| | ||| | |||||||||||||| |||||||| ||| Sbjct 384858 GCCTCCCCTCAGACGGAGAACCAGATGCAGAGTAGATTCTTTTTGGATGTTGTAGTCGGC 384917 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | || | ||| ||||| || || |||||| | |||||||| |||||||| || || Sbjct 384918 AAGGGTTCGGCCGTCCTCGAGCTGCTTTCCAGCAAAAATCAGACGCTGCTGATCAGGTGG 384977 Query 143077 TATGCCTTCTTTGTC 143091 || ||||| || || Sbjct 384978 GATCCCTTCCTTATC 384992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499176812962800