Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudotsuga_20menziesii_20[genbank_20GCA_5F001517045.1_202015-12-22] 1,236,665 sequences; 14,673,225,455 total letters Query= NC_005344.1 Length=39043 Score E Sequences producing significant alignments: (Bits) Value seq1030425 91.5 4e-14 >seq1030425 Length=585 Score = 91.5 bits (100), Expect = 4e-14 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 38313 TGAAGTTGCTCACTTTCTGCGTACTGGTGCTGAAGAATGGCTTCACCGTCACCGGAGAGA 38372 || || || | ||||| ||||| ||||||||||| || |||||||||||||| || || Sbjct 391 TGGAGCTGTTGACTTTTTGCGTCCTGGTGCTGAAAAACGGCTTCACCGTCACTGGTGAAT 450 Query 38373 GTGCCTGTGCAAGCCCGGAAAACTTTGATGCAGAAATTGGCCGGAAGATTGCCCGGCAAA 38432 ||||| || || |||||||| || || || || || ||| ||||| ||| | | Sbjct 451 CAGCCTGCGCTTCACCCGAAAACTTCGACGCTGAGATCGGTCGGCGTATTGCACGGGAGA 510 Query 38433 ATGCTGTAAACAAAATCTGG 38452 ||||||| | || |||||| Sbjct 511 ATGCTGTTCAGAAGATCTGG 530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122983027503650