Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudotsuga_20menziesii_20[genbank_20GCA_5F001517045.1_202015-12-22] 1,236,665 sequences; 14,673,225,455 total letters Query= NC_005822.1 Length=32172 Score E Sequences producing significant alignments: (Bits) Value seq927542 277 4e-70 >seq927542 Length=455 Score = 277 bits (306), Expect = 4e-70 Identities = 194/221 (88%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 11153 CTGATATTAACGCAAGTAAACTTGCTGAAAATGGGAATACAGTTAGAACATCAGCGTATT 11212 ||||||| |||||| ||||||||||||||||||||| | || ||||| ||||| ||| Sbjct 455 CTGATATCAACGCACATAAACTTGCTGAAAATGGGAACTCTGTGAGAACGTCAGCACATT 396 Query 11213 GGAAATCAGTAGGAAATGCAGAGTTTTACATTAAAGAGATCTACCAAAAGTTGAGCGCTT 11272 |||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||| Sbjct 395 GGAAATCAGTAGGAAATGCAGAGTTTTATATTAAAGAGATGTACCAAAAGTTAGACGCTC 336 Query 11273 TAGCAGAAATTGATAGACTTTTTCATTGGTCCGATCGTTTACATCAAGAACAATTAAAAT 11332 ||||||||||||||||||| || |||||||| ||||||||||||||||||||| |||| Sbjct 335 TAGCAGAAATTGATAGACTATTCCATTGGTCAAGTCGTTTACATCAAGAACAATTGAAAT 276 Query 11333 TTGTTGGCAAATATCCAAATGTTATGGAAAAATACAAACAA 11373 ||||| | |||||||| || |||||||||||||||| |||| Sbjct 275 TTGTTAGTAAATATCCCAAAGTTATGGAAAAATACAGACAA 235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 101318718261820