Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudotsuga_20menziesii_20[genbank_20GCA_5F001517045.1_202015-12-22] 1,236,665 sequences; 14,673,225,455 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq434543 105 6e-18 seq277093 96.9 3e-15 seq307481 93.3 4e-14 seq1193952 89.7 4e-13 seq678061 89.7 4e-13 seq1236130 87.8 1e-12 seq458253 87.8 1e-12 seq172461 87.8 1e-12 seq304998 86.0 5e-12 seq265356 86.0 5e-12 seq114939 86.0 5e-12 seq16451 86.0 5e-12 seq887318 84.2 2e-11 seq145273 82.4 6e-11 >seq434543 Length=395133 Score = 105 bits (116), Expect = 6e-18 Identities = 148/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCT-CGTCCTCCAGCT 48581 ||| || ||| ||||| ||||||||||| |||||||| ||| | |||||||||||| Sbjct 384198 ATGCAGGGTGGATTCCTTCTGAATGTTGTAGTCAGCCAA-GGTCCTTCCGTCCTCCAGCT 384256 Query 48582 GCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTT 48641 ||||||| | |||||| | ||| |||||| || | | |||||||||| || | Sbjct 384257 GCTTACCAGCAAAAATTAGCCTCTGTTGATCCGGGGGAATTCCTTCCTTGTCCTGGATCT 384316 Query 48642 TCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGG 48701 | ||||| | | ||||| || | ||| ||| | ||| || |||||||| | Sbjct 384317 TGGCCTTGACATTGTCAATGGTGTCAGAGCTCTCGACCTCCAGTGTAATAGTTTTACCAG 384376 Query 48702 TGAGAGTTTTCACAAAAATCTGCAT 48726 | || ||||||||||| |||||||| Sbjct 384377 TCAGGGTTTTCACAAAGATCTGCAT 384401 Score = 86.0 bits (94), Expect = 5e-12 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCT-CGTCCTCCAGCTGCTTACCGCCGTA 48594 ||||| ||||||||||| |||||||| ||| | ||||||||| ||||||||| | | Sbjct 384439 TCCTTCTGAATGTTGTAGTCAGCCAA-GGTCCTTCCGTCCTCCAACTGCTTACCAGCAAA 384497 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654 ||||| | ||| |||||| || | | |||||||||| || || ||||| | Sbjct 384498 AATTAGCCTCTGTTGATCCGGTGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATT 384557 Query 48655 CGCTATGGTATCGGTAGACTC-CGTC-TCGACTGTTATGGTTTTACCGGTGAGAGTTTTC 48712 | |||||||| | || ||| || | || | || || || || || || || ||||| Sbjct 384558 GTCAATGGTATCAG-AG-CTCTCGACTTCCAAGGTGATTGTCTTGCCAGTAAGGGTTTTG 384615 Query 48713 ACAAAAATCTGCAT 48726 ||||| |||||||| Sbjct 384616 ACAAATATCTGCAT 384629 Score = 82.4 bits (90), Expect = 6e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 || ||||| |||||||| || || | ||| ||||||| |||||||| || | || Sbjct 384895 TCTTTTTGGATGTTGTAGTCGGCAAGGGTTCGGCCGTCCTCGAGCTGCTTTCCAGCAAAA 384954 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655 || | |||||||||||| || | | |||||| ||| || || ||||| | Sbjct 384955 ATCAGACGCTGCTGATCAGGTGGGATCCCTTCCTTATCCTGGATCTTGGCCTTGACATTG 385014 Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715 | ||||| || | | ||| ||||| || || || || || ||||| ||||| ||| Sbjct 385015 TCGATGGTGTCAGAACTCTCGACCTCGAGAGTGATTGTCTTGCCAGTGAGGGTTTTGACA 385074 Query 48716 AAAATCTGCATCGTG 48730 || ||||||||| || Sbjct 385075 AAGATCTGCATCTTG 385089 >seq277093 Length=401374 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 ||||| ||||| |||||||| ||||| || | |||||||||||||||||| || | Sbjct 296521 TCCTTCTGAATATTGTAATCGGCCAAAGTCCGACCATCCTCCAGCTGCTTACCGGCGAAG 296580 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655 || | | |||||||||| || | | |||||||||| || || ||||| | Sbjct 296581 ATGAGTCTCTGCTGATCCGGGGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTA 296640 Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715 | ||||| || | ||| || | || || || || |||||||| ||||||||| Sbjct 296641 TCAATGGTGTCCGAGCTCTCAACTTCCAAGGTGATCGTCTTGCCGGTGAGGGTTTTCACA 296700 Query 48716 AAAATCTGCAT 48726 ||||||||||| Sbjct 296701 AAAATCTGCAT 296711 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 |||||||| |||||||| || || | | ||| | || ||||||||||| || | | Sbjct 150519 TCCTTTTGGATGTTGTAGTCCGCAAGTGTTCGGCCATCTTCCAGCTGCTTTCCAGCAAAG 150578 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655 || | |||||||||||| || | | |||||||||| || || |||| | | Sbjct 150579 ATCAGACGCTGCTGATCAGGAGGAATCCCTTCCTTGTCCTGGATCTTGGCTTTGACATTC 150638 Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715 | ||||| || | | || ||| | || ||||| || || ||||||||||| ||| Sbjct 150639 TCAATGGTGTCAGAACTATCGACCTCCAGAGTGATGGTCTTGCCAGTGAGAGTTTTGACA 150698 Query 48716 AAAATCTGCATC 48727 || ||||||||| Sbjct 150699 AAGATCTGCATC 150710 >seq307481 Length=1856025 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 48496 AAAACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATC 48555 ||| || || |||| | || || | |||||| ||| |||||| |||||||||||||| Sbjct 1819332 AAATCCACCACGCAGACGCAAGACGAGATGAAGGGTGGACTCCTTCTGAATGTTGTAATC 1819391 Query 48556 AGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCAC 48615 || | |||| | |||||||||||||| || | | |||| | ||| ||||| Sbjct 1819392 GGCGAGAGTTCGCCCATCCTCCAGCTGCTTGCCAGCAAATATTAGCCTCTGTTGATCAGG 1819451 Query 48616 CGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTC 48675 || | | |||||||||| ||| || || | | |||| || || | | ||| Sbjct 1819452 AGGAATTCCTTCCTTGTCCTGAATCTTAGCTTTCACATTATCTATAGTGTCAGAACTCTC 1819511 Query 48676 CGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | |||||| |||||||| || | ||| |||||||| || ||||| Sbjct 1819512 AACTTCTAATGTTATCGTTTTACCCGTCAAAGTCTTCACAAATATTTGCAT 1819562 >seq1193952 Length=303220 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 |||||| |||||||| |||||||||| ||| | || |||||||||||||| | | Sbjct 185824 CTCCTTCTGAATGTTATAATCAGCCAGAGTACGCCCATCTTCCAGCTGCTTACCAGCAAA 185765 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654 ||| | | |||||| || || | | ||||||||| || || ||| | | Sbjct 185764 AATCAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTCACATT 185705 Query 48655 CGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714 | |||||||||| ||| ||| | || ||||||||||| || || |||||||| Sbjct 185704 ATCAATGGTATCGGAGCTTTCCACCTCCAAGGTAATGGTTTTACCAGTAAGGGTTTTCAC 185645 Query 48715 AAAAATCTGCAT 48726 ||| |||||||| Sbjct 185644 AAAGATCTGCAT 185633 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||||| || || ||| ||||| ||||| ||||| || || | || |||| || Sbjct 185158 CACTAGGTGTAGAGTGGATTCCTTCTGAATATTGTAGTCGGCAAGGGTTCTGCCGTCTTC 185099 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 | |||||| ||| | | || ||||||||||||||| || | || |||||||||| Sbjct 185098 TAACTGCTTTCCGGCAAAGATCAAACGCTGCTGATCCGGGGGAATACCTTCCTTGTCCTG 185039 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 ||| || || | | | ||||| || | | ||| ||||| || || || || Sbjct 185038 AATCTTGGCTTTTACATTGTCAATGGTGTCAGAACTCTCAACCTCGAGAGTGATTGTCTT 184979 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCATCGTG 48730 || |||||||| || ||||| ||||||||| || Sbjct 184978 GCCAGTGAGAGTCTTGACAAAGATCTGCATCTTG 184945 >seq678061 Length=572976 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 |||||| |||||||| |||||||||| ||| | || |||||||||||||| | | Sbjct 353820 CTCCTTCTGAATGTTATAATCAGCCAGAGTACGCCCATCTTCCAGCTGCTTACCAGCAAA 353761 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654 ||| | | |||||| || || | | ||||||||| || || ||| | | Sbjct 353760 AATCAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTCACATT 353701 Query 48655 CGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714 | |||||||||| ||| ||| | || ||||||||||| || || |||||||| Sbjct 353700 ATCAATGGTATCGGAGCTTTCCACCTCCAAGGTAATGGTTTTACCAGTAAGGGTTTTCAC 353641 Query 48715 AAAAATCTGCAT 48726 ||| |||||||| Sbjct 353640 AAAGATCTGCAT 353629 >seq1236130 Length=574753 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 ||||| |||||||||||||| ||||| || | |||||||||||||| || | || Sbjct 402195 TCCTTCTGAATGTTGTAATCGGCCAACGTCCGACCATCCTCCAGCTGCTTGCCAGCAAAA 402254 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655 || | | |||||| ||| || | | |||||||||| || || ||||| | Sbjct 402255 ATGAGCCTCTGCTGGTCCGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTA 402314 Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715 | ||||| || | ||| || | || || || || |||||||| ||||||||| Sbjct 402315 TCAATGGTGTCCGAGCTCTCAACTTCCAAGGTGATCGTCTTGCCGGTGAGGGTTTTCACA 402374 Query 48716 AAAATCTGCAT 48726 ||||||||||| Sbjct 402375 AAAATCTGCAT 402385 >seq458253 Length=694718 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 ||||| |||||||||||||| ||||| || | |||||||||||||| || | || Sbjct 118792 TCCTTCTGAATGTTGTAATCGGCCAACGTCCGACCATCCTCCAGCTGCTTGCCAGCAAAA 118851 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655 || | | |||||| ||| || | | |||||||||| || || ||||| | Sbjct 118852 ATGAGCCTCTGCTGGTCCGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTA 118911 Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715 | ||||| || | ||| || | || || || || |||||||| ||||||||| Sbjct 118912 TCAATGGTGTCCGAGCTCTCAACTTCCAAGGTGATCGTCTTGCCGGTGAGGGTTTTCACA 118971 Query 48716 AAAATCTGCAT 48726 ||||||||||| Sbjct 118972 AAAATCTGCAT 118982 >seq172461 Length=351322 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 ||||| ||||||||||||||||| | ||| | |||||||||||||| || || || Sbjct 276430 TCCTTCTGAATGTTGTAATCAGCAAGAGTTCGACCATCCTCCAGCTGCTTGCCACCAAAA 276489 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655 || | | |||||||| || | | ||| |||||| |||||| ||| | | Sbjct 276490 ATAAGCCTTTGCTGATCAGGAGGAATCCCTTCTTTGTCCTGAATTTTAGCCTTCACATTA 276549 Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715 | || ||||| | | ||| ||| | ||| || || ||||| || || || |||||| Sbjct 276550 TCAATCGTATCAGAACTCTCAACCTCCAGTGTGATCGTCTTACCCGTCAGTGTCTTCACA 276609 Query 48716 AAAATCTGCAT 48726 || |||||||| Sbjct 276610 AATATCTGCAT 276620 >seq304998 Length=937332 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 |||||| ||||||||||||||||||||| ||| | ||||||| |||||||||| | | Sbjct 715079 CTCCTTCTGAATGTTGTAATCAGCCAATGTTCGACCATCCTCCAACTGCTTACCGGCAAA 715020 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654 || | | ||||| || || | | |||||||||| || || ||||| | Sbjct 715019 TATAAGCCTTTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATT 714960 Query 48655 CGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714 | ||||| || | ||| || | ||| || || || || ||||| ||||| || Sbjct 714959 ATCAATGGTGTCCGAGCTCTCAACTTCTAATGTGATCGTCTTGCCAGTGAGGGTTTTAAC 714900 Query 48715 AAAAATCTGCAT 48726 ||| |||||||| Sbjct 714899 AAAGATCTGCAT 714888 >seq265356 Length=295507 Score = 86.0 bits (94), Expect = 5e-12 Identities = 160/234 (68%), Gaps = 1/234 (0%) Strand=Plus/Minus Query 48494 TCAAAACCT-CCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTA 48552 |||||||| || |||| | || || | ||||||||| |||||| || |||||||| Sbjct 165707 TCAAAACCCACCACGCAGACGCAAGACGAGATGAAGTGTAGACTCCTTCTGGATGTTGTA 165648 Query 48553 ATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATC 48612 ||| || | |||| | ||||||||||| || || | | || || | ||||||||| Sbjct 165647 ATCGGCGAGAGTTCGCCCATCCTCCAGCTGTTTGCCAGCAAAGATCAACCTCTGCTGATC 165588 Query 48613 CACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGA 48672 || | | |||||||||| ||| ||| || | | | || ||||| | Sbjct 165587 AGGAGGAATTCCTTCCTTGTCCTGAATCTTCGCTTTTACATTATCGATCGTATCAGAGCT 165528 Query 48673 CTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| ||| | ||| ||||| || || || | || |||||||| |||||||| Sbjct 165527 CTCAACCTCCAGTGTGATGGTCTTGCCTGTCAACGTCTTCACAAATATCTGCAT 165474 >seq114939 Length=6097 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTG 48582 ||||| ||| ||||| || |||||||||||||| | | || || ||||||| ||||| Sbjct 1731 TGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGCAAGAGTG-CGTCCGTCCTCGAGCTG 1673 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 || ||| | | || || | |||||| ||| ||| | || |||||||| |||||| Sbjct 1672 TTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGCGGAATACCCTCCTTGTCTTGAATTTT 1613 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 ||| | | | || ||||||| ||| |||| || ||||| || ||||| Sbjct 1612 GGCCTTCACATTATCAATAGTATCGGAGTTCTCAACTTCGAGCGTGATGGTCTTGCCGGT 1553 Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726 || ||||| || || |||||||| Sbjct 1552 CAGGGTTTTGACGAAGATCTGCAT 1529 >seq16451 Length=660335 Score = 86.0 bits (94), Expect = 5e-12 Identities = 138/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 ||||| |||||||| ||||||||||| || | |||||||||||||||||| | || Sbjct 127798 TCCTTCTGAATGTTATAATCAGCCAAGGTGCGGCCATCCTCCAGCTGCTTACCGGCAAAA 127857 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655 || | | |||||| || ||| | | ||| || ||| ||||| ||| | | Sbjct 127858 ATAAGCCTCTGCTGGTCAGGCGGAATGCCTTCTTTATCCTGGATTTTGGCCTTCACATTA 127917 Query 48656 GCTATGGTATCGGTAGACTC-CGTC-TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCA 48713 | ||||| || | || ||| || | || | ||||| ||||| || ||||| ||||| | Sbjct 127918 TCAATGGTGTCTG-AG-CTCTCGACTTCCAAAGTTATCGTTTTCCCAGTGAGGGTTTTAA 127975 Query 48714 CAAAAATCTGCAT 48726 |||| |||||||| Sbjct 127976 CAAAGATCTGCAT 127988 >seq887318 Length=11432 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 ||||||||||| ||||||||||| | |||| | || ||||||||||| || || || Sbjct 10994 TCCTTTTGAATATTGTAATCAGCTAGGGTTCGCCCATCTTCCAGCTGCTTGCCTGCGAAA 10935 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655 || | | ||||||||| || | | |||||||||| ||| || ||| | | Sbjct 10934 ATGAGCCTCTGCTGATCAGGGGGAATTCCTTCCTTGTCCTGAATCTTAGCCTTCACATTA 10875 Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715 | || ||||| | ||| ||| | ||| || || || || || | ||| |||||| Sbjct 10874 TCAATCGTATCAGAGTTCTCAACCTCCAGTGTGATTGTCTTGCCCGTCAAAGTCTTCACA 10815 Query 48716 AAAATCTGCAT 48726 || |||||||| Sbjct 10814 AATATCTGCAT 10804 >seq145273 Length=631 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| | ||| || || |||||| ||||| |||||||| ||||| | | || || Sbjct 525 CACGAGATGCAGGGTCGACTCCTTCTGAATATTGTAATCGGCCAAAGTATGACCATCTTC 466 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 ||||||||||||| | | || || | |||||| || || | | ||||||||| Sbjct 465 CAGCTGCTTACCGGCAAAGATCAATCTCTGCTGGTCAGGTGGGATTCCCTCCTTGTCCTG 406 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 || || ||| | | | ||||| || | | |||| || | || |||||||| Sbjct 405 GATCTTAGCCTTAACATTATCAATGGTGTCAGAACTCTCCACTTCAAGAGTAATGGTTTT 346 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| || || ||||||||||| |||||||| Sbjct 345 ACCTGTAAGGGTTTTCACAAAGATCTGCAT 316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414902163126665