Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudotsuga_20menziesii_20[genbank_20GCA_5F001517045.1_202015-12-22] 1,236,665 sequences; 14,673,225,455 total letters Query= NC_008720.1 Length=70153 Score E Sequences producing significant alignments: (Bits) Value seq773576 89.7 2e-13 >seq773576 Length=412 Score = 89.7 bits (98), Expect = 2e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 52818 ATGGTAGCACCACTTGCATCAATACCCTGGTCATTGATGTTACGGTCATCCAGCAGAGGA 52877 ||||| | ||| | ||||||||||| ||||| |||||||| |||||||||||| || Sbjct 201 ATGGTCACGCCATTGGCATCAATACCTTGGTCGTTGATGTTGGCGTCATCCAGCAGGGGG 260 Query 52878 ACATATTCATACACCTTGATGGTCTTACCGTAATGCTTCGGCATGTTAGTTACAGAGGCC 52937 | || | || |||||| |||||||| | | ||||||||| ||| ||| || Sbjct 261 ATGTAGTGGAACTTCTTGATCTTCTTACCGAAGTTCTTCGGCATAGAAGTCACATCAGCA 320 Query 52938 AGTGGCATGAAGTACTGCTCTTTACGGGC 52966 || || ||||| ||||||||||| || Sbjct 321 AGCTGCTGAAAGTATTGCTCTTTACGAGC 349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 220983206337410