Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudotsuga_20menziesii_20[genbank_20GCA_5F001517045.1_202015-12-22] 1,236,665 sequences; 14,673,225,455 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq265356 105 5e-18 seq114939 98.7 8e-16 seq842679 96.9 3e-15 seq307481 96.9 3e-15 seq304998 93.3 3e-14 seq16451 93.3 3e-14 seq894858 91.5 1e-13 seq1197656 89.7 4e-13 seq810261 89.7 4e-13 seq996803 86.0 5e-12 seq434543 86.0 5e-12 seq661658 84.2 2e-11 seq510363 84.2 2e-11 seq470352 84.2 2e-11 seq56316 84.2 2e-11 >seq265356 Length=295507 Score = 105 bits (116), Expect = 5e-18 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 ||||| || || ||||| ||||| |||||||||||| ||||| ||||| | || Sbjct 165463 AGCCGAAGGACAAGATGCAGCGTTGACTCCTTCTGAATATTGTAGTCTGCAAGAGTTCTT 165404 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 | || || | |||||| || ||||| |||| | |||||||||| || | | ||| Sbjct 165403 CCATCTTCAAGTTGCTTCCCTGCAAAGATCAACCTCTGCTGATCCGGGGGAATCCCCTCC 165344 Query 34030 TTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGAT-TCGCATTCGACCGT 34088 |||||| ||| ||| ||| | | | | |||||| || | || ||||| ||| Sbjct 165343 TTGTCCTGAATCTTTGCCTTCACATTATCGATAGTATCAG-AGCTCTCAACTTCGAGCGT 165285 Query 34089 TATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128 || || ||||| || || ||||||||||||||||||||| Sbjct 165284 GATGGTCTTTCCAGTCAGGGTTTTCACAAAGATTTGCATT 165245 >seq114939 Length=6097 Score = 98.7 bits (108), Expect = 8e-16 Identities = 164/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 |||||||| || || ||||| || ||||| ||| |||||||| ||||||||||| || Sbjct 1755 CCTCCTCTGAGACGGAGCACGAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGCA 1696 Query 33961 A-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | | || || |||| || | || || |||||||| |||| | |||||| ||| ||| Sbjct 1695 AGAGTG-CGTCCGTCCTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGCGG 1637 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCA 34079 | | ||| ||||| |||||| ||| | | | | |||| | || ||| || Sbjct 1636 AATACCCTCCTTGTCTTGAATTTTGGCCTTCACATTATCAATAGTATC-GGAG-TTCTCA 1579 Query 34080 --TTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128 ||||| ||| || || || ||||| || ||||| || ||||| |||||| Sbjct 1578 ACTTCGAGCGTGATGGTCTTGCCGGTCAGGGTTTTGACGAAGATCTGCATT 1528 Score = 93.3 bits (102), Expect = 3e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 ||||| || || ||||| | || ||| ||||||||||| || ||||||| | | Sbjct 1974 AGCCGAAGGACAAGATGCAAGGTCGACTCTTTCTGAATGTTATAGTCTGCCAGAGTCCTC 1915 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 | || || | |||||| || ||||| |||| | ||||||||| | || | | ||| Sbjct 1914 CCATCCTCAAGTTGCTTCCCTGCAAAGATCAATCTCTGCTGATCGAGAGGAATCCCCTCC 1855 Query 34030 TTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCATTCGACCGTT 34089 |||||| ||| ||| ||| | | | | |||||| ||| ||| | ||| Sbjct 1854 TTGTCCTGAATCTTTGCCTTCACATTATCAATAGTATCAGAGTTTTCAACTTCAAGCGTG 1795 Query 34090 ATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128 || || || ||||| || ||||||||||||||||||||| Sbjct 1794 ATGGTCTTGCCGGTGAGGGTTTTCACAAAGATTTGCATT 1756 Score = 82.4 bits (90), Expect = 6e-11 Identities = 164/234 (70%), Gaps = 12/234 (5%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 |||||||| || || || || || ||||| ||| ||||||| ||||||||||| || Sbjct 1527 CCTCCTCTGAGACGTAGGACGAGGTGAAGAGTGGATTCCTTCTAGATGTTGTAATCGGCA 1468 Query 33961 A-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | | || || |||| || | || || |||||||| |||| | ||||||||| || Sbjct 1467 AGAGTG-CGTCCGTCCTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCGGGTGG 1409 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTT--AATGGAACTC-ACACTATCAGTAGATTC 34076 | | ||| ||||| |||||| ||| |||| || | | |||| | || ||| Sbjct 1408 AATACCCTCCTTGTCTTGAATTTTGGCCTTCACATGG---TCAATAGTATC-GGAG-TTC 1354 Query 34077 GCA--TTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128 || ||||| ||| || || || || || || ||||| || ||||| |||||| Sbjct 1353 TCAACTTCGAGCGTGATGGTCTTGCCAGTCAGGGTTTTGACGAAGATCTGCATT 1300 >seq842679 Length=263869 Score = 96.9 bits (106), Expect = 3e-15 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 |||||||| || || ||||| || ||||| ||| ||||||||||| |||||||| || Sbjct 132360 CCTCCTCTGAGACGGAGCACGAGGTGAAGAGTGGATTCCTTCTGAATATTGTAATCAGCG 132419 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | ||| |||| |||| ||||||||||||||||| || | ||| ||||| || Sbjct 132420 AGAGTTCGGCCGTCTTCCAGCTGCTTGCCGGCAAATATGAGCCTCTGTTGATCAGGGGGA 132479 Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAA 34051 | | |||||||||| ||| || ||||| Sbjct 132480 ATTCCCTCTTTGTCCTGAATCTTCGACTTAA 132510 Score = 86.0 bits (94), Expect = 5e-12 Identities = 138/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 33937 TCCTTCTGAATGTTGTAATCTGCCAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAAT 33996 |||||||||||||||||||| || | | ||| | || || | |||||||| ||||| Sbjct 131256 TCCTTCTGAATGTTGTAATCAGCAAGTGTTCGACCATCCTCAAGCTGCTTGCCAGCAAAA 131315 Query 33997 ATCAGGCGCTGCTGATCCACCGGCACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAA 34056 || || | ||| ||||| || | || ||||||||| |||||| ||| | | Sbjct 131316 ATAAGCCTCTGTTGATCAGGTGGAATGCCTTCTTTGTCCTGAATTTTAGCCTTCACATTA 131375 Query 34057 CTCACAC-TATCAGTAGAT-TCGCATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCA 34114 ||| | |||||| || | || ||| | ||| || || || ||||| || ||||| | Sbjct 131376 -TCAATCGTATCAG-AGCTCTCAACTTCAAGCGTGATGGTCTTGCCGGTCAGCGTTTTGA 131433 Query 34115 CAAAGATTTGCAT 34127 ||||||||||||| Sbjct 131434 CAAAGATTTGCAT 131446 >seq307481 Length=1856025 Score = 96.9 bits (106), Expect = 3e-15 Identities = 155/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || || ||||| ||||| || || ||||||||||||||| ||||| |||| | | Sbjct 1819573 AGACGAAGCACGAGATGCAGGGTAGACTCCTTCTGAATGTTATAATCCGCCAGAGTCCTC 1819632 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 | || || | |||||| || ||||| |||| | ||||||||| || | | ||| Sbjct 1819633 CCATCTTCAAGTTGCTTCCCTGCAAAGATCAATCTCTGCTGATCGGGGGGAATCCCCTCC 1819692 Query 34030 TTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGAT-TCGCATTCGACCGT 34088 |||||| ||| ||| ||| | | | | |||| | || | ||| ||| | || Sbjct 1819693 TTGTCCTGAATCTTTGCCTTCACATTATCAATAGTATC-GGAGCTCTCGACTTCAAGGGT 1819751 Query 34089 TATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128 || || || ||||| |||||||||||||||||||||||| Sbjct 1819752 GATAGTCTTGCCGGTCAGTGTTTTCACAAAGATTTGCATT 1819791 Score = 91.5 bits (100), Expect = 1e-13 Identities = 164/239 (69%), Gaps = 18/239 (8%) Strand=Plus/Plus Query 33898 AAACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCT 33957 || || || | ||| |||| || |||||||| ||| ||||||||||||||||||||| Sbjct 1819333 AATCCACCACGCAGACGCAAGACGAGATGAAGGGTGGACTCCTTCTGAATGTTGTAATCG 1819392 Query 33958 GCCAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACC 34017 || | |||| | || |||| |||||||| |||||||| || | ||| ||||| Sbjct 1819393 GCGAGAGTTCGCCCATCCTCCAGCTGCTTGCCAGCAAATATTAGCCTCTGTTGATCAGGA 1819452 Query 34018 GGCACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAG----- 34072 || | | || |||||| | | | || |||| ||||| |||| ||| Sbjct 1819453 GGAATTCCTTCCTTGTCC-TGAATCTTAGCTT--------TCACATTATCTATAGTGTCA 1819503 Query 34073 --ATTCGCA--TTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 | || || ||| | ||||| ||||| || || | || |||||||| |||||||| Sbjct 1819504 GAACTCTCAACTTCTAATGTTATCGTTTTACCCGTCAAAGTCTTCACAAATATTTGCAT 1819562 >seq304998 Length=937332 Score = 93.3 bits (102), Expect = 3e-14 Identities = 156/227 (69%), Gaps = 18/227 (8%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || || |||||||| || || || ||||||||||||||| ||||| |||| || Sbjct 715333 AGTCGAAGCACCAGGTGCAGAGTCGACTCCTTCTGAATGTTATAATCAGCCAGAGTACGT 715274 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 | || |||| |||||| || ||||||||||| | |||||| || ||| | || ||| Sbjct 715273 CCATCCTCCAGTTGCTTACCAGCAAATATCAGCCTCTGCTGGTCAGGCGGGATGCCCTCC 715214 Query 34030 TTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTC---GCATTCGACC 34086 |||||| ||| || |||| ||| ||||| | | || || || ||| Sbjct 715213 TTGTCCTGAATCTTGGCCTTA---------ACATTATCAATTGTGTCTGAGCTCTCCACC 715163 Query 34087 ------GTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 || || ||||| || || || ||||||||||| |||||||| Sbjct 715162 TCCAATGTAATGGTTTTCCCAGTAAGGGTTTTCACAAATATTTGCAT 715116 Score = 91.5 bits (100), Expect = 1e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || |||||||| || || || ||||| | || ||||||||||||||||||||| ||| Sbjct 715114 CCCCCTCTCAGACGAAGTACAAGATGTAAGGTCGACTCCTTCTGAATGTTGTAATCAGCC 715055 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 ||| ||| | || ||||| ||||| ||||||||||| || | ||||| || Sbjct 715054 AATGTTCGACCATCCTCCAACTGCTTACCGGCAAATATAAGCCTTTGCTGGTC 715002 Score = 91.5 bits (100), Expect = 1e-13 Identities = 90/114 (79%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATG-AAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 || |||||||| || ||||| || || ||| || | |||||||||||||||||||| || Sbjct 915455 CCGCCTCTCAGACGAAGCACAAGGTGTAAGGTTGAT-TCCTTCTGAATGTTGTAATCAGC 915397 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 |||| ||| | || ||||| ||||| ||||||||||| || | ||||| || Sbjct 915396 CAATGTTCGGCCATCCTCCAACTGCTTCCCGGCAAATATAAGCCTTTGCTGGTC 915343 >seq16451 Length=660335 Score = 93.3 bits (102), Expect = 3e-14 Identities = 162/237 (68%), Gaps = 18/237 (8%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| ||||||||||| ||||| || || || || |||||||||||||| ||||| || Sbjct 127761 ACCACCTCTCAGCCGAAGCACAAGGTGCAGGGTCGATTCCTTCTGAATGTTATAATCAGC 127820 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 ||| || | || |||| ||||| |||||||| || || | |||||| || ||| Sbjct 127821 CAAGGTGCGGCCATCCTCCAGCTGCTTACCGGCAAAAATAAGCCTCTGCTGGTCAGGCGG 127880 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGT--------A 34071 | || ||||| ||| |||| ||| ||||| ||||| | | Sbjct 127881 AATGCCTTCTTTATCCTGGATTT---------TGGCCTTCACATTATCAATGGTGTCTGA 127931 Query 34072 GAT-TCGCATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 | | ||| ||| | ||||| ||||| || || || ||||| |||||||| ||||| Sbjct 127932 GCTCTCGACTTCCAAAGTTATCGTTTTCCCAGTGAGGGTTTTAACAAAGATCTGCAT 127988 >seq894858 Length=235 Score = 91.5 bits (100), Expect = 1e-13 Identities = 90/114 (79%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATG-AAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 || |||||||| || ||||| || || ||| || | |||||||||||||||||||| || Sbjct 188 CCGCCTCTCAGACGAAGCACAAGGTGTAAGGTTGAT-TCCTTCTGAATGTTGTAATCAGC 130 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 |||| ||| | || ||||| ||||| ||||||||||| || | ||||| || Sbjct 129 CAATGTTCGGCCATCCTCCAACTGCTTACCGGCAAATATAAGCCTTTGCTGGTC 76 >seq1197656 Length=450275 Score = 89.7 bits (98), Expect = 4e-13 Identities = 162/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 |||||||| || || ||||| || ||||| ||| |||||||| ||||||||||| || Sbjct 440754 CCTCCTCTGAGACGGAGCACGAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGCA 440695 Query 33961 A-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | | || || |||| || | | || ||||||||||||| | ||||| || || Sbjct 440694 AGAGTG-CGTCCGTCCTCGAGCTATTTTCCGGCAAATATCAACCTCTGCTAGTCGGGGGG 440636 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCA 34079 | | ||| ||||| |||||| ||| | | | | | |||| | || ||| || Sbjct 440635 GATACCCTCCTTGTCTTGAATTTTGGCCTTCACGTTATCAATAGTATC-GGAG-TTCTCA 440578 Query 34080 --TTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128 ||||| ||| || || || ||||| || ||||| || ||||| |||||| Sbjct 440577 ACTTCGAGCGTGATGGTCTTGCCGGTCAGGGTTTTGACGAAGATCTGCATT 440527 Score = 89.7 bits (98), Expect = 4e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 ||||| || || ||||| | || ||| ||||||||||| || ||||||| | | Sbjct 440973 AGCCGAAGGACAAGATGCAAGGTCGACTCTTTCTGAATGTTATAGTCTGCCAGAGTCCTC 440914 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 | || || | |||||| | ||||| |||| | |||||||||| || | | ||| Sbjct 440913 CCATCCTCAAGTTGCTTCCTTGCAAAGATCAATCTCTGCTGATCCGGAGGAATCCCCTCC 440854 Query 34030 TTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCATTCGACCGTT 34089 |||||| ||| ||| ||| | | | | |||||| ||| ||| | ||| Sbjct 440853 TTGTCCTGAATCTTTGCCTTCACATTATCAATAGTATCAGAGTTTTCAACTTCAAGCGTG 440794 Query 34090 ATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128 || || || ||||| || ||||||||||||||||||||| Sbjct 440793 ATGGTCTTGCCGGTGAGGGTTTTCACAAAGATTTGCATT 440755 >seq810261 Length=116169 Score = 89.7 bits (98), Expect = 4e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 ||||| || || ||||| | || ||| ||||||||||| || ||||||| | | Sbjct 97986 AGCCGAAGGACAAGATGCAAGGTTGACTCTTTCTGAATGTTATAGTCTGCCAGAGTCCTC 97927 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 | || || | |||||| || ||||| || | | |||||||||| || | | ||| Sbjct 97926 CCATCCTCAAGTTGCTTCCCTGCAAAGATTAATCTCTGCTGATCCGGAGGAATCCCCTCC 97867 Query 34030 TTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCATTCGACCGTT 34089 |||||| ||| ||| ||| | | | | |||||| ||| ||| | ||| Sbjct 97866 TTGTCCTGAATCTTTGCCTTCACATTATCAATAGTATCAGAGTTTTCAACTTCAAGCGTG 97807 Query 34090 ATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128 || || || ||||| || ||||||||||||||||||||| Sbjct 97806 ATGGTCTTGCCGGTGAGGGTTTTCACAAAGATTTGCATT 97768 Score = 86.0 bits (94), Expect = 5e-12 Identities = 164/234 (70%), Gaps = 12/234 (5%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 |||||||| || || ||||| || ||||| ||| |||||||| ||||||||||| || Sbjct 97767 CCTCCTCTGAGACGGAGCACGAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAATCAGCA 97708 Query 33961 A-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | | || || |||| || | || || |||||||| |||| | |||||| || || Sbjct 97707 AGAGTG-CGTCCGTCCTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGGTCGGGAGG 97649 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTT---AATGGAACTCACACTATCAGTAGATTC 34076 | | ||| ||||| |||||| ||| | || | | | |||| | || ||| Sbjct 97648 AATACCCTCCTTGTCTTGAATTTTGGCCTTCACATTGTCA---ATAGTATC-GGAG-TTC 97594 Query 34077 GCA--TTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128 || ||||| ||| || || || ||||| || ||||| || ||||| |||||| Sbjct 97593 TCAACTTCGAGCGTGATGGTCTTGCCGGTCAGGGTTTTGACGAAGATCTGCATT 97540 >seq996803 Length=140400 Score = 86.0 bits (94), Expect = 5e-12 Identities = 165/238 (69%), Gaps = 8/238 (3%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| |||||||| || || || ||||| || ||| ||||||||||| ||||| || || Sbjct 16400 ACCACCTCTCAGACGGAGTACAAGATGCAGGGTGGATTCCTTCTGAATATTGTAGTCGGC 16341 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | ||| |||| || | ||||| || ||||| || |||||||||||||| || Sbjct 16340 AAGGGTTCGGCCGTCTTCAAGCTGCTTTCCAGCAAAGATAAGGCGCTGCTGATCAGGGGG 16281 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTA---TCAGTAGAT-T 34075 | || || |||||| | | | || |||| | | | || || |||| || | | Sbjct 16280 AATGCCTTCCTTGTCC-TGAATCTTGGCTT--TTACATTGTCAATAGTGTCAG-AGCTCT 16225 Query 34076 CGCATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATTTTTAA 34133 || |||| || || || || || || || || || |||||||||||||| || || Sbjct 16224 CGACCTCGAGAGTGATCGTCTTGCCAGTAAGAGTCTTGACAAAGATTTGCATCTTGAA 16167 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33899 AACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTG 33958 |||| || | || || |||||||| || | || ||||||||||||||| || || | Sbjct 17541 AACCACCACGAAGACGGAGCACCAGGTGCAATGTAGACTCCTTCTGAATGTTATAGTCAG 17482 Query 33959 CCAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018 ||| || | || |||| ||||| || ||||| ||||| | |||||| || | Sbjct 17481 CCAGAGTACGTCCATCTTCCAGCTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCGGGAG 17422 Query 34019 GCACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGAT-TCG 34077 | | || |||||| ||| ||| ||| ||| | | | | | | |||| || | ||| Sbjct 17421 GGATGCCCTCTTTATCCTGAATCTTTGCCTTCACGTTATCAATAGTGTCAG-AGCTCTCG 17363 Query 34078 CATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 || | || || || || || || || |||||||||||||||||||| Sbjct 17362 ACCTCCAAGGTAATAGTCTTCCCAGTCAGGGTTTTCACAAAGATTTGCAT 17313 >seq434543 Length=395133 Score = 86.0 bits (94), Expect = 5e-12 Identities = 104/139 (75%), Gaps = 2/139 (1%) Strand=Plus/Plus Query 33898 AAACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCT 33957 ||||| || | || || |||||||| || || || ||||||||||||||| |||||| Sbjct 121346 AAACCACCACGGAGACGTAGCACCAGGTGCAGGGTCGACTCCTTCTGAATGTTATAATCT 121405 Query 33958 GCCA-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCAC 34016 || | | || ||| | || |||| ||||||||| ||||| || || | |||||| || Sbjct 121406 GCAAGAGTG-CGCCCATCTTCCAGTTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGG 121464 Query 34017 CGGCACGCTCTCTTTGTCC 34035 || | | |||||||||| Sbjct 121465 AGGGATCCCCTCTTTGTCC 121483 Score = 84.2 bits (92), Expect = 2e-11 Identities = 89/115 (77%), Gaps = 2/115 (2%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || |||||||| || ||||| ||||| | ||| ||||||||||||||||| || ||| Sbjct 384403 CCACCTCTCAGACGAAGCACAAGATGCAAGGTGGATTCCTTCTGAATGTTGTAGTCAGCC 384462 Query 33961 AATTGTCGCT-CGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCC 34014 || ||| | |||| ||||| ||||| || ||||| || || | ||| |||||| Sbjct 384463 AA-GGTCCTTCCGTCCTCCAACTGCTTACCAGCAAAAATTAGCCTCTGTTGATCC 384516 Score = 82.4 bits (90), Expect = 6e-11 Identities = 90/117 (77%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 33898 AAACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCT 33957 ||||| || | || || |||||||| || || || ||||||||| ||||| |||||| Sbjct 383944 AAACCACCACGGAGACGGAGCACCAGGTGCAGGGTCGACTCCTTCTGTATGTTATAATCT 384003 Query 33958 GCCA-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 |||| | || ||| | || || | ||| ||||||||||| ||||| | |||||| || Sbjct 384004 GCCAGAGTG-CGCCCATCTTCGAGTTGTTTGCCGGCAAAGATCAGCCTCTGCTGGTC 384059 >seq661658 Length=5917 Score = 84.2 bits (92), Expect = 2e-11 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || ||||| || || || ||||| ||||| ||| ||||||||||| |||||||| || Sbjct 3874 CCACCTCTGAGACGAAGGACCAGGTGAAGAGTGGATTCCTTCTGAATATTGTAATCGGCG 3933 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | ||| | || |||| |||||||| |||||||| || | ||| ||||| || Sbjct 3934 AGGGTTCGGCCATCTTCCAGCTGCTTGCCAGCAAATATGAGCCTCTGTTGATCAGGAGGG 3993 Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAA 34051 | | |||||||||| ||| || ||||| Sbjct 3994 ATTCCCTCTTTGTCCTGAATCTTCGCCTTAA 4024 >seq510363 Length=735265 Score = 84.2 bits (92), Expect = 2e-11 Identities = 110/151 (73%), Gaps = 1/151 (1%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || ||||| || || || ||||| ||||| ||| |||||||||||||||||||| || Sbjct 714035 CCACCTCTGAGACGAAGGACCAGGTGAAGAGTGGATTCCTTCTGAATGTTGTAATCGGCG 713976 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | ||| | | ||||| | |||||| |||||||| || | ||| |||| || || Sbjct 713975 AGGGTTCGGCCATGTTCCAACTACTTGCCAGCAAATATGAGCCTCTGTTGAT-CAGGGGA 713917 Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAA 34051 | | |||||||||| ||| || ||||| Sbjct 713916 ATTCCCTCTTTGTCCTAAATCTTCGCCTTAA 713886 >seq470352 Length=2473 Score = 84.2 bits (92), Expect = 2e-11 Identities = 161/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 |||||||| || || ||||| || ||||| | | |||||||| ||||||||||| || Sbjct 633 CCTCCTCTGAGACGGAGCACGAGGTGAAGAGCGGATTCCTTCTGGATGTTGTAATCAGCA 574 Query 33961 A-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | | || || ||| || | || || ||||||| |||| | |||||| ||| ||| Sbjct 573 AGAGTG-CGTCTGTCCTCGAGCTGTTTTTCGGCAAAGATCAACCTCTGCTGGTCCGACGG 515 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCA 34079 | | ||| ||||| |||||| ||| | | | | |||| | || ||| || Sbjct 514 AATACCCTCCTTGTCTTGAATTTTGGCCTTCACATTATCAATAGTATC-GGAG-TTCTCA 457 Query 34080 --TTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128 ||||| ||| || || || ||||| || ||||| || ||||| |||||| Sbjct 456 ACTTCGAGCGTGATGGTCTTGCCGGTCAGGGTTTTGACGAAGATCTGCATT 406 >seq56316 Length=363335 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| ||||| |||| || || ||||||||||| ||| ||||||||||| |||||||| Sbjct 72137 ACCGCCTCTTAGCCTTAGGACAAGATGAAGCGTTGACTCTTTCTGAATGTTATAATCTGC 72196 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 | ||| | || || | ||||| || ||||||||||| | ||||||||| Sbjct 72197 AAGAGATCGTCCATCCTCTAGCTGCTTCCCAGCAAATATCAGTCTCTGCTGATC 72250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391077933205330