Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudotsuga_20menziesii_20[genbank_20GCA_5F001517045.1_202015-12-22] 1,236,665 sequences; 14,673,225,455 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq930373 188 9e-43 seq370741 100 3e-16 seq284582 98.7 1e-15 seq1113752 95.1 1e-14 seq879200 95.1 1e-14 seq759392 91.5 2e-13 seq363405 91.5 2e-13 seq567411 86.0 8e-12 seq137683 86.0 8e-12 seq290801 82.4 9e-11 >seq930373 Length=6908 Score = 188 bits (208), Expect = 9e-43 Identities = 830/1301 (64%), Gaps = 36/1301 (3%) Strand=Plus/Minus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 || || |||| ||| ||| || || || ||||| | |||||| ||||||| |||||| Sbjct 2158 TACATATTGGAAGTGACTGGTTCGAAACATTCATTATAACCCAATATTTGGGATGTGGAT 2099 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATG-CGTTC 116021 || || ||||| ||||||||| ||| || | | ||| | | | || | || Sbjct 2098 GCAGTAGGCATTGGTGCCATGGTCAGGGAATTTCTAATACCATGCTTCATGATATCTTTT 2039 Query 116022 CTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAG 116081 ||| ||| |||||| || | || | | | ||||||||||||||||| || Sbjct 2038 CTTAAGGT-GTCCCAATCCCACATGCCGTAGGGTTTTTGGTCCCACATATCAAACTGTAG 1980 Query 116082 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAA 116141 |||||||| || || || ||||| | || || || ||||| || || || || | Sbjct 1979 TATACCTTGAGAAGCAGGAGATCCTTGGAAAGTTTCGTATGGACCGTCCTTCTGAGCTAG 1920 Query 116142 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGC 116201 ||| | || || | || || ||||| || || ||||| || | ||| | Sbjct 1919 TTCACAAGAAGCTTCCATGGAGGCATGATAAATAGTTTCAAAGATTTGGATATTTAGCAA 1860 Query 116202 CTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTG 116261 ||| || || |||||||| | | ||| ||| || || || ||||||||||| Sbjct 1859 ACGGGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGACCTTG 1800 Query 116262 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATA 116321 ||||| | ||||||| | |||||||||||| || |||| || || || || || Sbjct 1799 AACACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACAGGGTA 1740 Query 116322 AAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAG 116381 |||| | ||| || || || |||| ||| || ||||| || | |||||||| | Sbjct 1739 GTAATTACGATCAATGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCATGTAA 1680 Query 116382 CTTTTCGTAATCAAAACTGCGAGTCT---------------CTTCATTGACATACTTAGG 116426 |||| | | | | || ||||| |||| ||| || || || Sbjct 1679 TTTTTTGAAGTTGTATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGA-ATGCT--GG 1623 Query 116427 AAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 116486 | ||| | || |||| ||||| |||| || ||||| | | | ||| || | ||| Sbjct 1622 TAAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCATCTGGAGCTGAGTATTCAACAAT 1563 Query 116487 TTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 116546 ||| || || ||||| ||| ||| || ||||| |||||||| || ||| |||| Sbjct 1562 TTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGATTAGATTTTCTGTT 1503 Query 116547 ACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 116606 ||| ||||||||||| | | | || || || || || ||||| | | | ||| | Sbjct 1502 ACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAAATGGA 1443 Query 116607 CTTCCATACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGT 116666 | ||||| | |||| | ||| || | || || || | |||||| || Sbjct 1442 ATACCATAATTTTTGGGCTTTGATAGT---CTTACCACGACCTTCTTTCTCGTAGCGGGT 1386 Query 116667 GTAGAGGGCCTCAAACTCTTCACC--CACAGCCTCTGAGAGCCCTGGTGCCTTAT-CTGG 116723 || || ||||||||||| ||||| ||| | || | | || || | || || ||| Sbjct 1385 ATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAA--CCAGGAG-CTGATGTTGG 1329 Query 116724 ACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCA 116783 | |||| | | ||| ||| || || || ||||||||||| || || || ||||| Sbjct 1328 AGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCA 1269 Query 116784 GAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTC 116843 || || | ||| | ||| | ||| ||| || | || || || | | || Sbjct 1268 TAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATC 1209 Query 116844 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCT 116899 | ||| || | ||||| || ||||| ||||||||||| | || | | ||| || Sbjct 1208 AATAAAATCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCT 1149 Query 116900 TGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAA 116959 | | |||| |||||| ||||| | || || || || || |||| ||| |||| Sbjct 1148 T-TTATTACCACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACGAATCATAGGAA 1090 Query 116960 TGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAG-ACTTGTTGGCTCTGACATCG 117018 | | ||| | ||| || ||||| || ||| || || ||| | | | | Sbjct 1089 TTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTT-GAACGAATGTTA 1031 Query 117019 TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTG 117078 ||||| || | ||||||||| || || || || || || || ||| | | || Sbjct 1030 TGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTG 971 Query 117079 CCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGT 117138 |||| ||||| ||||| ||||| |||| | || | | ||| || |||||||| Sbjct 970 TCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGA 911 Query 117139 GGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTG 117179 || |||| ||||| || ||||| | ||||| | ||||| Sbjct 910 GGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTG 870 >seq370741 Length=39598 Score = 100 bits (110), Expect = 3e-16 Identities = 467/733 (64%), Gaps = 9/733 (1%) Strand=Plus/Minus Query 116473 GTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGA 116532 || || || ||||| || || || | || ||| || ||||| |||| |||| ||| Sbjct 38513 GTATATTCGATAATCTCTGTGCAGAGGTTAGAAGATTTGATGGTTCCCAGATTCTGCTGA 38454 Query 116533 TTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGG 116592 ||| || | ||||| ||||| ||||||| ||||| | || || || | || Sbjct 38453 TTTCTTTTCCTATTACAGCTGTCCTTAAAGAGCATGTATGGATTTCCTGTTTCTATCTGA 38394 Query 116593 GACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTC 116651 | | ||||||| ||| | | || | | ||| ||| || || ||||| Sbjct 38393 GCTTCCAGAATAGAAAACCAAAGCTTCTGTGCCTGT-ACAACCTTTTTTGCCTTACCCTC 38335 Query 116652 CTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGG 116711 | |||||| || |||| || |||||| |||||||| | || | ||||| || Sbjct 38334 TTGCTCGTATTTCATGTACAGTTTCTCAAATTCTTCACCTCAACAATCAGCAAGCCCAGG 38275 Query 116712 TGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAG 116771 ||| | || ||||| || | | |||| | | ||||| |||| ||||| ||||| Sbjct 38274 TGCTTCATTGGGACAAAATAATGTCCATGTAGAATTCTCCTGGACCCTTTTCATAAAGAG 38215 Query 116772 GTCTGGGATCCAGAGCGCCGAGAAGAGATCCCG-ACAGCGAGCTTCTTCATCCCCCTGAT 116830 |||||| | ||| || || | || ||||| || | | | ||||| | ||| || | Sbjct 38214 GTCTGGCACCCAAAGAGCAAAAAATAGATCACGTGCTTTGTTC-TCTTCCTTCCCATGGT 38156 Query 116831 TGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGA 116890 | | |||||||| ||| || | | ||| || ||||| || || | ||||| | | Sbjct 38155 TCTTTCTCAACTCCAGAAACTCAAAAACATCTGCATGCCATGGCTCTAAGTACATGGAAA 38096 Query 116891 TTGACCCCTTGC---GACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGC 116947 | ||||| | | ||| | |||| ||||| | || | | || ||||| | Sbjct 38095 AGGCACCCTTCCTCTTTCCTCCACCTTGGTCAACATATCGAGCATTATCATTGAATACCC 38036 Query 116948 GAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGA-GACTTGTTG 117006 | |||||| | ||||||| |||| ||||||||| || || ||| | ||| ||| Sbjct 38035 TCAACATTGGCACAATACCATTAGATGTGCCATTTGTTCCTCGGATATAACTACTAGTT- 37977 Query 117007 GCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCAC 117066 || | | | || | | ||||| || ||||| | || ||| || ||| Sbjct 37976 GCACGAATGTTATGCACTGAAACACCAAGTCCTCCTGCTGATTTGCTTATTACAGCACAC 37917 Query 117067 TCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAG 117126 ||| | | | | | || || || || || ||| | || | | |||||||| Sbjct 37916 TCCTTTAAAGTATCATATATTCCCTCAATGCTATCATCTTTCATGCAAACAAGGAAGCAA 37857 Query 117127 CTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAAC 117186 || ||| |||||||||||||| ||||| ||||| || || || | || ||| ||||| Sbjct 37856 CTACTCATCTGTGGCCTTGGTGTCCCAGCATTGAAAAGTGTCGGAGAAGCATGGGTGAAC 37797 Query 117187 ATACCTTGGGACA 117199 || ||| |||| Sbjct 37796 CAACGTTGTGACA 37784 >seq284582 Length=29610 Score = 98.7 bits (108), Expect = 1e-15 Identities = 358/557 (64%), Gaps = 5/557 (1%) Strand=Plus/Plus Query 116647 CCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGC 116706 ||||| | |||||| || |||| || |||||||||||||||| | || | ||| Sbjct 3076 CCCTCTTGCTCGTATTTCATGTACAGTTTCTCAAACTCTTCACCCCAACAATCAGCAAGC 3135 Query 116707 CCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATG 116766 || |||| | || |||| || | | |||| | | ||||| |||| ||||| Sbjct 3136 CCAGGTGTTTCATTGTGACAAAATAATGTCCATGTAGAATTCTCCTGGACCCTTTTCATA 3195 Query 116767 AAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCC 116826 ||||||||||| | ||| || || | || ||||| || | ||||| | ||| Sbjct 3196 AAGAGGTCTGGCACCCAAAGAGCAAAAAATAGATCACGTGCTCTGTTCTCTTCCTTCCCA 3255 Query 116827 TGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACC 116886 || || | ||| |||| ||| || | | ||| || ||||| || || | ||||| Sbjct 3256 TGGTTCTTTCTCAAATCCAGAAACTCAAAAACATCTGCATGCCATGGCTCTAAGTACATG 3315 Query 116887 GCGATTGACCCCTTGC---GACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAAT 116943 || | || ||||| | | ||| | |||| ||||| | || || | || ||| Sbjct 3316 GCAAAGGAACCCTTCCTCTTGCCTCCACCTTGGTCAACATATCGAGCAGTATCATTGAAT 3375 Query 116944 ACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGA-GACTT 117002 || | | |||||| ||||||| |||| ||||||||| || || ||| | ||| Sbjct 3376 ACCCTCAACATTGGCGCAATACCATTAGATGTGCCATTTGTTCCTCGGATATAACTACTA 3435 Query 117003 GTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGC 117062 ||| || | | | || | | ||||| || ||||| | || ||| || Sbjct 3436 GTT-GCACGAATGTTATGCACTGAAACACCAAGTCCTCCTGCTGATTTGCTTATTACAGC 3494 Query 117063 GCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAA 117122 |||||| | | | | | || || || || || ||| | || | | ||||| Sbjct 3495 ACACTCCTTTAAAGTATCATATATTCCCTCAATGCTATCATCTTTCATGTAAAAAAGGAA 3554 Query 117123 GCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGAT 117182 ||| || ||| |||||||||||||| ||||| ||||| || || | | || ||| | Sbjct 3555 GCAACTACTCATCTGTGGCCTTGGTGTCCCAGCATTGAAAAGTGTCGAAGAAGCATGGGT 3614 Query 117183 GAACATACCTTGGGACA 117199 |||| || ||| |||| Sbjct 3615 GAACCAACGTTGTGACA 3631 >seq1113752 Length=809592 Score = 95.1 bits (104), Expect = 1e-14 Identities = 566/897 (63%), Gaps = 11/897 (1%) Strand=Plus/Minus Query 116473 GTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGA 116532 || || || ||||| || || || | || ||| || ||||| |||| |||| ||| Sbjct 29412 GTATATTCGATAATCTCTGTGCAGAGGTTAGAAGATTTGATGGTTCCCAGATTCTGATGA 29353 Query 116533 TTTGACTTTGT-GTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTG 116591 || || ||| | |||||| ||||| ||||||| ||||| | || || || | || Sbjct 29352 TT-GATTTTCTTGTTACAGCTGTCCTTAAAGAGCATGTATGGATTGCCTGTTTCTATCTG 29294 Query 116592 GGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCT 116650 | | ||||||| ||| | | || | | ||| ||| || | |||| Sbjct 29293 AGCTTCCAGAATAGAAAACCAAAGCTTCTGTGCCTGT-ACAACCTTTTTTTCCTTACCCT 29235 Query 116651 CCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTG 116710 | | || ||| || |||| || |||||| ||||||||| | || | ||||| | Sbjct 29234 CTTGCTTGTATTTCATGTACAGTTTCTCAAATTCTTCACCCCAACAATCAGCAAGCCCAG 29175 Query 116711 GTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGA 116770 |||| | || ||||| || | | |||| | | ||||| |||| ||||| |||| Sbjct 29174 GTGCTTCATTGGGACAAAATAATGTCCATGTAGAATTCTCCTGGACCCTTTTCATAAAGA 29115 Query 116771 GGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGAT 116830 ||||||| | ||| || | | || ||||| || | ||||| | ||| || | Sbjct 29114 GGTCTGGCACCCAAAGAGAAAAAAATAGATCACGTGCTCTGTTCTCTTCCTTCCCATGGT 29055 Query 116831 TGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGA 116890 | | ||| |||| ||| || | | ||| || ||||| || || | ||||| || | Sbjct 29054 TCTTTCTCAAATCCAGAAACTCAAAAACATCTGCATGCCATGGCTCTAAGTACATGGCAA 28995 Query 116891 TTGACCCCTTGC---GACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGC 116947 | ||||| | | ||| | |||| ||||| | || || | || ||||| | Sbjct 28994 AGGCACCCTTCCTCTTGCCTCCACCTTGGTCAACATATCGAGCAGTATCATTGAATACCC 28935 Query 116948 GAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGA-GACTTGTTG 117006 | |||||| | ||||||| |||| ||||||||| || || ||| | ||| ||| Sbjct 28934 TCAACATTGGCACAATACCATTAGATGTGCCATTTGTTCCTCGGATATAACTACTAGTT- 28876 Query 117007 GCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCAC 117066 || | | | || | | ||||| || ||||| | || ||| || ||| Sbjct 28875 GCACGAATGTTATGCACTGAAACACCAAGTCCTCCTGCTGATTTGCTTATTACAGCACAC 28816 Query 117067 TCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAG 117126 ||| | | | | | || || || || || ||| | || | | |||||||| Sbjct 28815 TCCTTTAAATTATCATATATTCCCTCAATGCTATCATCTTTCATGCAAACAAGGAAGCAA 28756 Query 117127 CTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAAC 117186 | ||| |||||||||||||| ||||| ||||| || || || | || ||| ||||| Sbjct 28755 ATACTCATCTGTGGCCTTGGTGTCCCAGCATTGAAAAGTGTCGGAGAAGCATGGGTGAAC 28696 Query 117187 ATACCTTGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATA 117246 || ||| ||| ||| || || | | | || |||||| | | || || Sbjct 28695 CAACTTTGTCACAATATATGATAAGTGTTGATAGCTGAATCAATGTCATTCTTATGGATT 28636 Query 117247 CCGATTGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTC 117306 || || || |||| ||| ||||| | ||| || | || || | | |||| | | | Sbjct 28635 CCTATAGAAACCCTCATTAACATATGTTGAGGCCTCTCAATAACAACTCCATTG-GTTTT 28577 Query 117307 TGGAGGTAACTCT-TCTCCAAGGTCTTGAGACCAAAATAGCCAAAGTCATAGTCCCT 117362 | | | || | ||||||| ||||| | |||||| ||| | | ||| | ||||| Sbjct 28576 TAAAAGATACGATCTCTCCAATGTCTTAAAACCAAAGTAGTCGTAATCAAAATCCCT 28520 >seq879200 Length=86129 Score = 95.1 bits (104), Expect = 1e-14 Identities = 357/557 (64%), Gaps = 5/557 (1%) Strand=Plus/Minus Query 116647 CCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGC 116706 ||||| | |||||| || |||| || |||||| ||||||||| | || | ||| Sbjct 83701 CCCTCTTGCTCGTATTTCATGTACAGTTTCTCAAATTCTTCACCCCAACAATCAGCAAGC 83642 Query 116707 CCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATG 116766 || || || | || ||||| || | | |||| | | ||||| |||| ||||| Sbjct 83641 CCAGGAGCTTCATTGGGACAAAATAATGTCCATGTAGAATTCTCCTGGACCCTTTTCATA 83582 Query 116767 AAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCC 116826 ||||||||||| | ||| || | | || ||||| || | ||||| | ||| Sbjct 83581 AAGAGGTCTGGCACCCAAAGAGAAAAAAATAGATCACGTGCTCTGTTCTCTTCCTTCCCA 83522 Query 116827 TGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACC 116886 || || | ||| |||| ||| || | | ||| || ||||| || || | ||||| Sbjct 83521 TGGTTCTTTCTCAAATCCAGAAACTCAAAAACATCTGCATGCCATGGCTCTAAGTACATG 83462 Query 116887 GCGATTGACCCCTTGC---GACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAAT 116943 || | | ||||| | | ||| | |||| ||||| | || || | || ||| Sbjct 83461 GCAAAGGCACCCTTCCTCTTTCCTCCACCTTGGTCAACATATCGAGCAGTATCATTGAAT 83402 Query 116944 ACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGA-GACTT 117002 || | | |||||| | ||||||| |||| ||||||||| || || ||| | ||| Sbjct 83401 ACCCTCAACATTGGCACAATACCATTAGATGTGCCATTTGTTCCTCGGATATAACTACTA 83342 Query 117003 GTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGC 117062 ||| || | | | || | | ||||| || ||||| | || ||| || Sbjct 83341 GTT-GCACGAATGTTATGCACTGAAACACCAAGTCCTCCTGCTGATTTGCTTATTACAGC 83283 Query 117063 GCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAA 117122 |||||| | | | | | || || || || || ||| | || | | ||||| Sbjct 83282 ACACTCCTTTAAAGTATCATATATTCCCTCAATGCTATCATCTTTCATGCAAACAAGGAA 83223 Query 117123 GCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGAT 117182 ||| || ||| |||||||||||||| | ||| ||||| || || || | || ||| | Sbjct 83222 GCAACTACTCATCTGTGGCCTTGGTGTCCTAGCATTGAAAAGTGTCGGAGAAGCATGGGT 83163 Query 117183 GAACATACCTTGGGACA 117199 |||| || ||| |||| Sbjct 83162 GAACCAACGTTGTGACA 83146 >seq759392 Length=161938 Score = 91.5 bits (100), Expect = 2e-13 Identities = 360/560 (64%), Gaps = 11/560 (2%) Strand=Plus/Minus Query 116647 CCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGC 116706 ||||| | || ||| || |||| || |||||| ||||||||| | || | ||| Sbjct 23278 CCCTCTTACTTGTATTTCATGTACAGTTTCTCAAATTCTTCACCCCAACAATCAGCAAGC 23219 Query 116707 CCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATG 116766 || ||||| | || ||||| || | | |||| | | ||||| |||| ||||| Sbjct 23218 CCAGGTGCTTCATTGGGACAAAATAATGTCCATGTATAATTCTCCTGGACCCTTTTCATA 23159 Query 116767 AAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCC 116826 ||||||||||| | ||| || || | | ||||| || | | ||||| | ||| Sbjct 23158 AAGAGGTCTGGCACCCAAAGAGCAAAATATAGATCACGTGCTCTATTCTCTTCCTTCCCA 23099 Query 116827 TGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACC 116886 || || | ||| |||| ||| || | | ||| || ||||| || || | ||||| Sbjct 23098 TGGTTCTTTCTCAAATCCAGAAACTCAAAAACATCTGCATGCCATGGCTCTAAGTACATG 23039 Query 116887 GCGATTGACCCCTTGC---GACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAAT 116943 || | | ||||| | | ||| | |||| ||||| | || || | || ||| Sbjct 23038 GCAAAGGCACCCTTCCTCTTGCCTCCACCTTGGTCAACATATCGAGCAGTAACATTGAAT 22979 Query 116944 ACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGA-GACTT 117002 || | | |||||| | ||||||| |||| ||||||||| || || ||| | || Sbjct 22978 ACCCTCAACATTGGCACAATACCATTAGATGTGCCATTTGTTCCTCGGATATAACTACCA 22919 Query 117003 GTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGC 117062 ||| || | | | || | | ||||| || ||||| | || ||| || Sbjct 22918 GTT-GCACAAATGTTATGCACTGAAACACCAAGTCCTCCTGCTGATTTGCTTATTACAGC 22860 Query 117063 GCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATT--TGC-GATGAG 117119 |||||| | | | | | || || || || || || | | | || ||| | || Sbjct 22859 ACACTCCTTTAAAGTATCATATATTCCCTCAAT---GTTATCATATTTCATGCAAACAAG 22803 Query 117120 GAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTG 117179 |||||| || ||| |||||||||||| | ||||| ||||| || || || | || || Sbjct 22802 GAAGCAACTACTCATCTGTGGCCTTGGTTTCCCAGCATTGAAAAGTGTCGGAGAAGCATG 22743 Query 117180 GATGAACATACCTTGGGACA 117199 | ||||| || ||| |||| Sbjct 22742 GGTGAACCAACGTTGTGACA 22723 >seq363405 Length=728354 Score = 91.5 bits (100), Expect = 2e-13 Identities = 455/719 (63%), Gaps = 7/719 (1%) Strand=Plus/Plus Query 116647 CCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGC 116706 ||||| | |||||| || |||| || |||||| |||| |||| | || | ||| Sbjct 718888 CCCTCTTGCTCGTATTTCATGTACAGTTTCTCAAATTCTTTACCCCAACAATCAGCAAGC 718947 Query 116707 CCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATG 116766 || ||||| | || ||||| || | | |||| | | ||||| |||| ||||| Sbjct 718948 CCAGGTGCTTCATTGGGACAAAATAATGTCCATGTAGAATTCTCCTGGACCCTTTTCATA 719007 Query 116767 AAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCC 116826 ||||||||||| | ||| || | | || ||||| || | ||||| | ||| Sbjct 719008 AAGAGGTCTGGCACCCAAAGAGAAAAAAATAGATCACGTGGTCTGTTCTCTTCCTTCCCA 719067 Query 116827 TGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACC 116886 || || | ||| |||| ||| || | | ||| || ||||| || || | ||||| Sbjct 719068 TGGTTCTTTCTCAAATCCAGAAACTCAAAAACATCTGCATGCCATGGCTCTAAGTACATG 719127 Query 116887 GCGATTGACCCCTTGC---GACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAAT 116943 || | | ||||| | | ||| | |||| ||||| || || | || ||| Sbjct 719128 GCAAAGGCACCCTTCCTCTTGCCTCCACCTTGGTCAACATATTGAGCAGTATCATTGAAT 719187 Query 116944 ACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGA-GACTT 117002 || | | |||||| | ||||||| |||| ||||||||| || || ||| | ||| Sbjct 719188 ACCCTCAACATTGGCACAATACCATTAGATGTGCCATTTGTTCCTCGGATATAACTACTA 719247 Query 117003 GTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGC 117062 ||| || | | || | | ||||| || ||||| | ||| ||| || Sbjct 719248 GTT-GCAAGAATGTTATGCACTGAAACACCAAGTCCTCCTGCTGATTTTCTTATTACAGC 719306 Query 117063 GCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAA 117122 |||||| | | | | | || || || || || ||| | || | | ||||| Sbjct 719307 ACACTCCTTTAAAGTATCATATATTCCCTCAATGCTATCATCTTTCATGCAAACAAGGAA 719366 Query 117123 GCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGAT 117182 ||| || ||| ||||||||||| || ||||| ||||| || || || | || ||| | Sbjct 719367 GCAACTACTCATCTGTGGCCTTGGGGTCCCAGCATTGAAAAGTGTCGGAGAAGCATGGGT 719426 Query 117183 GAACATACCTTGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTG 117242 |||| || ||| |||| ||| || || | | | || |||||| | | || Sbjct 719427 GAACCAACGTTGTGACAATATATGATAAGTGTTGATAGCTGAATCAATGTCATTCTTATG 719486 Query 117243 AATACCGATTGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAG 117302 || || || | |||| ||| ||||| | ||| || | || || | | |||| | | Sbjct 719487 GATTCCTATAGCAACCCTCATTAACATATGTTGAGGCCTCTCAATAACAACTCCATTG-G 719545 Query 117303 CCTCTGGAGGTAACTCT-TCTCCAAGGTCTTGAGACCAAAATAGCCAAAGTCATAGTCC 117360 | | | | || | ||||||| ||||| | |||||| ||| || | ||| | ||| Sbjct 719546 TTTTTAAAAGATACGATCTCTCCAATGTCTTAAAACCAAAGTAGTCATAATCAAAATCC 719604 >seq567411 Length=1219020 Score = 86.0 bits (94), Expect = 8e-12 Identities = 335/522 (64%), Gaps = 11/522 (2%) Strand=Plus/Minus Query 116473 GTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGA 116532 || || || ||||| || || || | || ||| || ||||| ||||| |||| ||| Sbjct 142134 GTATATTCGATAATCTCTGTGCAGAGGTTAGAAGATTTGATGGTTCCCAAATTCTGCTGA 142075 Query 116533 TTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGG 116592 || || ||||||| ||||| ||||||| ||||| | || || || | || Sbjct 142074 TTGCTTTTCCTGTTACAGCTGTCCTTAAAGAGCATGTATGGATTTCCTGTTTCTATCTGA 142015 Query 116593 GACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTC 116651 | | ||||||| ||| | | || | ||| ||| || || ||||| Sbjct 142014 GCTTCCAGAATAGAAAACCAAAGCTTCTGTTCCTGT-ACAACATTTTTTGCCTTACCCTC 141956 Query 116652 CTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGG 116711 | |||||| || |||| || |||||| ||||||||| | || | ||||| || Sbjct 141955 TTGCTCGTATTTCATGTACAGTTTCTCAAATTCTTCACCCCAACAATCAGCAAGCCCAGG 141896 Query 116712 TGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAG 116771 ||| | || ||||| || | | |||| | | ||||| |||| |||||| ||||| Sbjct 141895 TGCTTCATTGGGACAAAATAATGTCCATGTAGAATTCTCCTGGACCCTCTTCATAAAGAG 141836 Query 116772 GTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATT 116831 |||||| | ||| || | | || ||||| || | ||||| | ||| || || Sbjct 141835 GTCTGGCACCCAAAGAGAAAAAAATAGATCACGTGCTCTGTTCTCTTCCTTCCCATGGTT 141776 Query 116832 GAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGAT 116891 | ||| |||| ||| || | | || || ||||| || || | ||||| || | Sbjct 141775 CTTTCTCAAATCCAGAAACTCAAAAACATATGCATGCCATGGCTCTAAGTACATGGCAAA 141716 Query 116892 TG-ACCC-----CTTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATAC 116945 | |||| ||||| | || | |||| ||||| | || || | || ||||| Sbjct 141715 GGCACCCTTCCTCTTGCCTCAAC---CTTGGTCAACATATCGAGCAGTATCATTGAATAC 141659 Query 116946 GCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCC 116987 | | |||||| | ||||||| |||| ||||||||| || Sbjct 141658 CCTCAACATTGGCACAATACCATTAGATGTGCCATTTGTTCC 141617 >seq137683 Length=1137553 Score = 86.0 bits (94), Expect = 8e-12 Identities = 230/351 (66%), Gaps = 3/351 (1%) Strand=Plus/Minus Query 116647 CCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGC 116706 ||||| | |||||| ||| |||| || ||||| ||||||||| | || | ||| Sbjct 947933 CCCTCTTGCTCGTATTTTATGTACAGTTTGTCAAATTCTTCACCCCAACAATCAGCAAGC 947874 Query 116707 CCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATG 116766 || ||||| | || ||||| || | | |||| | | ||||| |||| ||||| Sbjct 947873 CCAGGTGCTTCATTGGGACAAAATAATGTCCATGTAGAATTCTCCTGGACCCTTTTCATA 947814 Query 116767 AAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCC 116826 ||||||||||| | ||| || | | || ||||| || | ||||| | ||| Sbjct 947813 AAGAGGTCTGGCACCCAAAGAGAAAAAAATAGATCACGTGCTCTGTTCTCTTCCTTCCCA 947754 Query 116827 TGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACC 116886 || || | ||| |||| ||| || | | ||| || ||||| || || | ||||| Sbjct 947753 TGGTTCTTTCTCAAATCCAGAAACTCAAAAACATCTGCATGCCATGGCTCTAAGTACATG 947694 Query 116887 GCGATTGACCCCTTGC---GACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAAT 116943 | | | ||||| | | ||| | |||| ||||| | || || | || ||| Sbjct 947693 GAAAAGGCACCCTTCCTCTTGCCTCCACCTTGGTCAACATATCGAGCAGTATCATTGAAT 947634 Query 116944 ACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATA 116994 || | | |||||| | ||||||| |||| ||||||||| || ||||| Sbjct 947633 ACCCTCAACATTGGCACAATACCATTAGATGTGCCATTTGTTCCTTGAATA 947583 >seq290801 Length=174758 Score = 82.4 bits (90), Expect = 9e-11 Identities = 229/351 (65%), Gaps = 3/351 (1%) Strand=Plus/Plus Query 116647 CCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGC 116706 ||||| | |||||| || |||| || |||||| ||||||||| | || | ||| Sbjct 29053 CCCTCTTGCTCGTATTTCATGTATAGTTTCTCAAATTCTTCACCCCAACAATCAGCAAGC 29112 Query 116707 CCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATG 116766 || || || | || ||||| || | | |||| | | ||||| ||||| ||||| Sbjct 29113 CCAGGAGCTTCATTGGGACAAAATAATGTCCATGTAGAATTCTCCTGAACCCTTTTCATA 29172 Query 116767 AAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCC 116826 ||||||||||| | ||| | | | || ||||| || | | ||||| | ||| Sbjct 29173 AAGAGGTCTGGCACCCAAAAAGAAAAAAATAGATCACGTCCTCTGTTCTCTTCCTTCCCA 29232 Query 116827 TGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACC 116886 || || | ||| |||| ||| || | | ||| || ||||| || || | ||||| Sbjct 29233 TGGTTCTTTCTCAAATCCAGAAACTCAAAAACATCTGCATGCCATGGGTCTAAGTACATG 29292 Query 116887 GCGATTGACCCCTTGC---GACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAAT 116943 || | | ||||| | | ||| | |||| ||||| | | || | || ||| Sbjct 29293 GCAAAGGCACCCTTCCTCTTTCCTCCACCTTGGTCAACATATCAAGAAGTATCATTGAAT 29352 Query 116944 ACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATA 116994 || | | |||||| | ||||||| |||| ||||||| | || || ||| Sbjct 29353 ACCCTCAACATTGGCACAATACCATTAGATGTGCCATTTTTTCCTCGGATA 29403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 604023413981400