Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudotsuga_20menziesii_20[genbank_20GCA_5F001517045.1_202015-12-22] 1,236,665 sequences; 14,673,225,455 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq1192815 131 1e-25 seq878211 102 7e-17 seq1193952 93.3 4e-14 seq678061 93.3 4e-14 seq304998 93.3 4e-14 seq753218 91.5 1e-13 seq145273 91.5 1e-13 seq810261 89.7 4e-13 seq510363 89.7 4e-13 seq458253 89.7 4e-13 seq434543 89.7 4e-13 seq307481 89.7 4e-13 seq184199 89.7 4e-13 seq1122789 86.0 5e-12 seq16451 86.0 5e-12 seq661658 84.2 2e-11 seq913050 82.4 6e-11 seq679059 82.4 6e-11 seq172461 82.4 6e-11 >seq1192815 Length=22216 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 || |||||||| || || || || ||||| ||||| || |||||| ||| ||| || Sbjct 9881 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 9940 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 || || || | | | || ||||| || ||| ||||| || || | || || Sbjct 9941 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 10000 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 ||||| ||| | |||||||| || || |||||||||||| || |||| || |||| || Sbjct 10001 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 10060 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 ||||| ||||| ||||||||||| ||| |||| || ||||| |||| || Sbjct 10061 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 10110 >seq878211 Length=3116 Score = 102 bits (112), Expect = 7e-17 Identities = 157/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 28563 TTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCAGAGACGGTG 28622 ||||| || || || || ||||| ||||| || ||| ||| |||| || || | Sbjct 1087 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 1146 Query 28623 GCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTT 28682 | | || ||||| ||| || ||||| || || | || || ||||| ||| | Sbjct 1147 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 1206 Query 28683 ATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAACATTCAAAAA 28742 |||||||| || || ||||||||||| || ||| || | || || |||||||||||| Sbjct 1207 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 1266 Query 28743 GAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGATAAT 28786 ||||| ||| ||||| | || || ||||| |||| || || || Sbjct 1267 GAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGGTATCAT 1310 >seq1193952 Length=303220 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| ||||| | || ||||||||||||||| || |||| || Sbjct 185633 ATGCAGATCTTTGTGAAAACCCTTACTGGTAAAACCATTACCTTGGAGGTGGAAAGCTCC 185692 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| || ||| ||||| ||||| | || || || Sbjct 185693 GATACCATTGATAATGTGAAGGCTAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAG 185752 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| || || ||||| || || || |||||||| ||| |||| ||||||||| Sbjct 185753 CAGAGGCTGATTTTTGCTGGTAAGCAGCTGGAAGATGGGCGTACTCTGGCTGATTATAAC 185812 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGT 28762 ||||| || || |||||||||||| |||| Sbjct 185813 ATTCAGAAGGAGTCTACTCTGCACCTGGT 185841 >seq678061 Length=572976 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| ||||| | || ||||||||||||||| || |||| || Sbjct 353629 ATGCAGATCTTTGTGAAAACCCTTACTGGTAAAACCATTACCTTGGAGGTGGAAAGCTCC 353688 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| || ||| ||||| ||||| | || || || Sbjct 353689 GATACCATTGATAATGTGAAGGCTAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAG 353748 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| || || ||||| || || || |||||||| ||| |||| ||||||||| Sbjct 353749 CAGAGGCTGATTTTTGCTGGTAAGCAGCTGGAAGATGGGCGTACTCTGGCTGATTATAAC 353808 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGT 28762 ||||| || || |||||||||||| |||| Sbjct 353809 ATTCAGAAGGAGTCTACTCTGCACCTGGT 353837 >seq304998 Length=937332 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||||||||| | || |||||||||||||| ||| ||| ||| Sbjct 595889 ATGCAGATCTTTGTAAAAACCCTTACAGGTAAAACCATTACTCTTGAAGTGGAGAGTTCT 595948 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| || ||| ||||| |||||| | || || || Sbjct 595949 GACACCATTGATAATGTTAAGGCTAAGATCCAGGACAAGGAGGGAATCCCACCTGACCAG 596008 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 |||||| | |||||||| || || || |||||||| | ||| |||||||||| || Sbjct 596009 CAGAGATTGATCTTTGCCGGTAAGCAGCTGGAAGATGGTCGTACTCTGGCCGATTACAAT 596068 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGT 28762 ||||| || || || || ||||| |||| Sbjct 596069 ATTCAGAAGGAGTCGACCCTGCATCTGGT 596097 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||||||||| ||||| | || || ||||||||||| || ||| ||| Sbjct 806618 ATGCAAATATTTGTCAAAACCCTTACTGGGAAAACCATTACATTGGAGGTGGAGAGCTCA 806677 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| || ||| ||||| ||||| | || || || Sbjct 806678 GACACAATTGATAATGTAAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAG 806737 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| | || ||||| || || ||| |||||||| ||| |||| || |||||| Sbjct 806738 CAGAGGTTGATATTTGCTGGTAAGCAACTGGAAGATGGACGCACTCTGGCTGACTATAAC 806797 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGT 28762 ||||| || || || ||||||||| |||| Sbjct 806798 ATTCAGAAGGAGTCGACTCTGCACCTGGT 806826 >seq753218 Length=1074133 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| ||||| || || ||||| ||||||||| || || ||| Sbjct 399343 ATGCAGATCTTTGTGAAAACCTTGACTGGTAAGACCATTACCTTGGAGGTTGAGAGTTCG 399284 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| || ||| ||||| ||||| | || || ||| Sbjct 399283 GACACCATTGATAATGTGAAGGCTAAGATCCAGGACAAGGAGGGCATTCCACCTGACCAA 399224 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 |||||||| || ||||| || || || || |||||| ||| |||| || |||||| Sbjct 399223 CAGAGACTGATATTTGCTGGGAAGCAGTTAGAAGATGGACGTACTCTGGCTGACTATAAC 399164 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTA 28763 ||||| || || || ||||||||| ||||| Sbjct 399163 ATTCAGAAGGAGTCAACTCTGCACCTGGTA 399134 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| ||||| | || || || || || || ||| ||| || Sbjct 399571 ATGCAGATTTTTGTCAAAACCCTTACTGGCAAGACGATCACTCTGGAAGTGGAGAGCTCG 399512 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| ||| ||| || |||||||| | ||| ||| || Sbjct 399511 GACACCATCGATAATGTGAAGGCAAAGATCCAGGATAAAGAGGGTATTCCCCCAGACCAG 399452 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| || || ||||| || ||||| ||||| ||| || |||||||||||||| Sbjct 399451 CAGAGGCTAATTTTTGCTGGTAAACAGTTGGAGGATGGCCGGACCTTGGCCGATTATAAC 399392 Query 28734 ATTCAAAAAGAATCTACTCTGCA 28756 |||||||| ||||| || ||||| Sbjct 399391 ATTCAAAAGGAATCGACCCTGCA 399369 >seq145273 Length=631 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| ||||| | || |||||||||||||| ||| ||| ||| Sbjct 316 ATGCAGATCTTTGTGAAAACCCTTACAGGTAAAACCATTACTCTTGAAGTGGAGAGTTCT 375 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| || ||| ||||| |||||| | || || || Sbjct 376 GACACCATTGATAATGTTAAGGCTAAGATCCAGGACAAGGAGGGAATCCCACCTGACCAG 435 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 |||||| | |||||||| || || || |||||||| | | ||| |||||||||| || Sbjct 436 CAGAGATTGATCTTTGCCGGTAAGCAGCTGGAAGATGGTCATACTTTGGCCGATTACAAT 495 Query 28734 ATTCAAAAAGAATCTACTCTGCA 28756 ||||| || || || || ||||| Sbjct 496 ATTCAGAAGGAGTCGACCCTGCA 518 >seq810261 Length=116169 Score = 89.7 bits (98), Expect = 4e-13 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 || ||||| ||||||||||| ||||| || || || || || ||| || |||| Sbjct 97082 AATATGCAGATATTTGTAAAGACATTGACTGGAAAGACAATCACCCTTGAGGTGGAAAAC 97141 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 || || || | | | || | ||| ||| ||| ||||||||||| | || ||| Sbjct 97142 TCTGATACCATTGACAATGTGAAGGCAAAGATCCAGGACAAAGAGGGCATCCCTCCAGAC 97201 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 || ||| | || |||||||| ||||| || ||||| ||| ||| | ||||| || Sbjct 97202 CAGCAGCGTCTCATCTTTGCTGGCAAGCAGTTGGAGGATGGACGCACTCTCGCCGACTAC 97261 Query 28731 AACATTCAAAAAGAATCTACTCTGCAC 28757 ||||| || || || |||||||| ||| Sbjct 97262 AACATCCAGAAGGAGTCTACTCTCCAC 97288 >seq510363 Length=735265 Score = 89.7 bits (98), Expect = 4e-13 Identities = 90/116 (78%), Gaps = 1/116 (1%) Strand=Plus/Plus Query 28647 GACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAA 28706 |||||||||||| | ||| | ||||||||||| || || ||||| ||||| | |||||| Sbjct 713903 GACAAAGAGGGAATTCCCCT-GATCAACAGAGGCTCATATTTGCTGGCAAGTAGTTGGAA 713961 Query 28707 GATTCTAAAACTATGGCCGATTATAACATTCAAAAAGAATCTACTCTGCACATGGT 28762 || ||| | |||||||| |||||||| || ||||| ||||| ||| |||| Sbjct 713962 CATGGCCGAACCCTCGCCGATTACAACATTCAGAAGGAATCCACTCTTCACCTGGT 714017 >seq458253 Length=694718 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||||||||| ||||| |||| || ||||||||||| || ||| |||| Sbjct 550190 ATGCAAATATTTGTGAAAACCCTAACTGGCAAAACCATTACATTGGAGGTGGAGAGTTCA 550131 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | || || ||| ||||| ||||| | || || || Sbjct 550130 GACACAATTGATAATGTTAAAGCTAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAG 550071 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| | || ||||| || || || |||||||| ||| |||||||||||||| Sbjct 550070 CAGAGGTTGATTTTTGCTGGTAAGCAGCTGGAAGATGGACGTACTCTGGCCGATTATAAC 550011 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGT 28762 ||||| || || || ||||| ||| |||| Sbjct 550010 ATTCAGAAGGAGTCGACTCTACACTTGGT 549982 >seq434543 Length=395133 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| || || | || || |||||||||||| || ||| || Sbjct 121575 ATGCAGATCTTTGTGAAGACCCTGACTGGGAAAACCATTACCCTGGAGGTGGAGAGCTCT 121516 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| || ||| ||||||||||| | || || || Sbjct 121515 GACACCATTGATAATGTGAAGGCCAAGATCCAGGACAAAGAGGGGATCCCTCCTGACCAG 121456 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| ||||||||||| ||||| ||| |||||||| ||| | || ||||||||| Sbjct 121455 CAGAGGCTTATCTTTGCTGGCAAGCAACTGGAAGATGGGCGCACTCTTGCAGATTATAAC 121396 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGT 28762 ||||| || || || || |||||| |||| Sbjct 121395 ATTCAGAAGGAGTCGACCCTGCACCTGGT 121367 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| |||||||| ||||| | ||||| || || || || ||| || ||| Sbjct 384857 ATGCAGATATTTGTCAAAACCCTGACGGGAAAGACAATCACTTTGGAAGTCGAGAGTTCT 384798 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | | | ||| || ||| ||||| || ||| | ||| ||| || Sbjct 384797 GACACCATCGACAACGTTAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGACCAG 384738 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || || |||||||| || || || || |||| || | ||| ||||||| || ||| Sbjct 384737 CAAAGGCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGTCGAACCCTGGCCGACTACAAC 384678 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGT 28762 || ||||||||||||||||||||| |||| Sbjct 384677 ATCCAAAAAGAATCTACTCTGCACCTGGT 384649 >seq307481 Length=1856025 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 ||||||||| ||||| |||||| | || || || || || ||| ||| || || Sbjct 1819791 AATGCAAATCTTTGTGAAAACACTGACCGGCAAGACTATCACCCTTGAAGTCGAGAGCTC 1819732 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || | ||| ||| || ||||| ||||| | ||| ||||| Sbjct 1819731 CGATACTATTGATAATGTGAAGGCAAAGATTCAGGACAAGGAGGGGATTCCCCCCGATCA 1819672 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 |||||| | |||||||| || || ||| | |||||| | ||| |||| |||||||| Sbjct 1819671 GCAGAGATTGATCTTTGCAGGGAAGCAACTTGAAGATGGGAGGACTCTGGCGGATTATAA 1819612 Query 28733 CATTCAAAAAGAATCTACTCTGCA 28756 |||||| || || ||||| ||||| Sbjct 1819611 CATTCAGAAGGAGTCTACCCTGCA 1819588 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 || ||||| ||||||||||| ||||| || || || ||||| ||| || ||| Sbjct 1820477 AATATGCAGATATTTGTAAAGACATTGACTGGAAAGACCATCACCCTTGAGGTGGAGAGC 1820418 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 || || || | | || | ||| ||| ||| ||||||||||| | || ||| Sbjct 1820417 TCTGATACCATCGATAATGTGAAGGCAAAGATCCAGGACAAAGAGGGCATCCCTCCAGAC 1820358 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 || ||| | || |||||||| ||||| || ||||| || ||| | ||||| || Sbjct 1820357 CAGCAGCGTCTAATCTTTGCTGGCAAGCAGTTGGAGGACGGACGCACTCTTGCCGACTAC 1820298 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTA 28763 ||||| || || ||||||||||| ||| | ||| Sbjct 1820297 AACATACAGAAGGAATCTACTCTCCACCTCGTA 1820265 >seq184199 Length=30872 Score = 89.7 bits (98), Expect = 4e-13 Identities = 154/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 28563 TTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCAGAGACGGTG 28622 || || || || || || ||||| ||||| || ||| ||| |||| || || | Sbjct 27069 TTCGTTAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATT 27128 Query 28623 GCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTT 28682 | | || ||||| || ||| ||||| || || | || || ||||| ||| | Sbjct 27129 GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 27188 Query 28683 ATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAACATTCAAAAA 28742 |||||||| || || ||||||||||| || |||| | | || || ||||| ||||| Sbjct 27189 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAG 27248 Query 28743 GAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGATAAT 28786 ||||| ||| | || |||| || |||||| |||| || || || Sbjct 27249 GAATCCACTTTACATTTGGTCTTGAGATTAAGAGGTGGTATCAT 27292 >seq1122789 Length=489025 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGA-ACCTTC 28612 |||||||||||||| ||||| | ||||| || ||||| || ||| || | || | Sbjct 336743 ATGCAAATATTTGTCAAAACGCTGACGGGCAATACCATCACGCTTGAAGTTGAGAGCTAC 336684 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || | ||| || || || || |||||| | || ||||| Sbjct 336683 -GACACTATTGATAATGTGAAGGCCAAGATTCAGGATAAGGAGGGAATTCCTCCGGATCA 336625 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||||||| | |||||||| || || ||| | |||||| | ||| |||||||||| || Sbjct 336624 ACAGAGATTGATCTTTGCTGGAAAGCAACTTGAAGATGGGAGGACTCTGGCCGATTACAA 336565 Query 28733 CATTCAAAAAGAATCTACTCTGCA 28756 |||| || |||||||||||||| Sbjct 336564 TGTTCAGAAGGAATCTACTCTGCA 336541 >seq16451 Length=660335 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||||||||| | || || || ||||||||| || |||| || Sbjct 127760 ATGCAGATCTTTGTAAAAACTCTTACTGGCAAGACCATTACCTTGGAGGTGGAAAGCTCT 127701 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| || ||| ||||| ||||| | || || || Sbjct 127700 GATACCATTGATAATGTGAAGTCTAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAG 127641 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| || || ||||| || || || |||||||| ||| |||| ||||||||| Sbjct 127640 CAGAGGCTGATTTTTGCAGGTAAGCAGCTGGAAGATGGGCGTACTCTGGCTGATTATAAC 127581 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTA 28763 ||||| || || || ||||||||| ||||| Sbjct 127580 ATTCAGAAGGAGTCAACTCTGCACTTGGTA 127551 >seq661658 Length=5917 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 28647 GACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAA 28706 |||||||||||| | || ||||||||||| || || ||||| ||||| || ||||| Sbjct 4007 GACAAAGAGGGAATCCCTCCTGATCAACAGAGGCTCATATTTGCTGGCAAGCAGCTGGAA 3948 Query 28707 GATTCTAAAACTATGGCCGATTATAACATTCAAAAAGAATCTACTCTGCACATGGT 28762 ||| ||| | |||||||| || ||||| || ||||| ||||| ||| |||| Sbjct 3947 GATGGCCGAACCCTCGCCGATTACAATATTCAGAAGGAATCCACTCTTCACCTGGT 3892 >seq913050 Length=592780 Score = 82.4 bits (90), Expect = 6e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 28672 AACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 28731 |||||||| | |||||||| || || ||| | |||||| | ||| |||||||||| | Sbjct 269688 AACAGAGATTGATCTTTGCAGGAAAGCAACTTGAAGATGGGAGGACTCTGGCCGATTACA 269747 Query 28732 ACATTCAAAAAGAATCTACTCTGCA 28756 ||||||| || |||||||||||||| Sbjct 269748 ACATTCAGAAGGAATCTACTCTGCA 269772 >seq679059 Length=136279 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| ||||| | ||||| || ||||| || ||| || || Sbjct 120281 ATGCAAATCTTTGTCAAAACGCTGACGGGCAAGACCATCACGCTTGAAGTTGAGAGCTCC 120340 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| || || || || |||||| | || ||||| Sbjct 120341 GACACTATTGATAATGTGAAGGCCAAGATTCAGGATAAGGAGGGAATTCCTCCGGATCAG 120400 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 |||||| | |||||||| || || ||| | |||||| | ||| |||||||||| ||| Sbjct 120401 CAGAGATTGATCTTTGCTGGAAAGCAACTTGAAGATGGGAGGACTCTGGCCGATTACAAC 120460 Query 28734 ATTCAAAAAGAATCTACTCTGCA 28756 ||| | || |||||||||||||| Sbjct 120461 ATTTAGAAGGAATCTACTCTGCA 120483 >seq172461 Length=351322 Score = 82.4 bits (90), Expect = 6e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 28672 AACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 28731 |||||||| | |||||||| || || ||| | |||||| | ||| |||||||||| | Sbjct 35866 AACAGAGATTGATCTTTGCAGGAAAGCAACTTGAAGATGGGAGGACTCTGGCCGATTACA 35807 Query 28732 ACATTCAAAAAGAATCTACTCTGCA 28756 |||||||||| |||||||| ||||| Sbjct 35806 ACATTCAAAAGGAATCTACGCTGCA 35782 Score = 82.4 bits (90), Expect = 6e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 28672 AACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 28731 |||||||| | |||||||| || || ||| | |||||| | ||| |||||||||| | Sbjct 152696 AACAGAGATTGATCTTTGCAGGAAAGCAACTTGAAGATGGGAGGACTCTGGCCGATTACA 152637 Query 28732 ACATTCAAAAAGAATCTACTCTGCA 28756 |||||||||| |||||||| ||||| Sbjct 152636 ACATTCAAAAGGAATCTACGCTGCA 152612 Score = 82.4 bits (90), Expect = 6e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 28672 AACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 28731 |||||||| | |||||||| || || ||| | |||||| | ||| |||||||||| | Sbjct 276730 AACAGAGATTGATCTTTGCAGGAAAGCAACTTGAAGATGGGAGGACTCTGGCCGATTACA 276671 Query 28732 ACATTCAAAAAGAATCTACTCTGCA 28756 |||||||||| |||||||| ||||| Sbjct 276670 ACATTCAAAAGGAATCTACGCTGCA 276646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418993160671035