Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudotsuga_20menziesii_20[genbank_20GCA_5F001517045.1_202015-12-22] 1,236,665 sequences; 14,673,225,455 total letters Query= NC_021534.1 Length=47552 Score E Sequences producing significant alignments: (Bits) Value seq1030425 102 2e-17 >seq1030425 Length=585 Score = 102 bits (112), Expect = 2e-17 Identities = 100/129 (78%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 4895 CCAGATTTTATTTACCGCATTCTCTCTGGCAATCTTGCGACCAATTTCAGCGTCGAAATT 4954 |||||| || | || |||||||| | ||||| ||||| || ||||||||||| || Sbjct 530 CCAGATCTTCTGAACAGCATTCTCCCGTGCAATACGCCGACCGATCTCAGCGTCGAAGTT 471 Query 4955 CTCTGGACTGGCGCAGGCGCTTTCTCCTGTCACGGTGAAGCCGTTTTTCAGCACCAAGAC 5014 || || |||||||| ||| || || ||||||||||||||||||||||||| ||| Sbjct 470 TTCGGGTGAAGCGCAGGCTGATTCACCAGTGACGGTGAAGCCGTTTTTCAGCACCAGGAC 411 Query 5015 GCAAAAGGT 5023 |||||| || Sbjct 410 GCAAAAAGT 402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149811961769220