Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudotsuga_20menziesii_20[genbank_20GCA_5F001517045.1_202015-12-22] 1,236,665 sequences; 14,673,225,455 total letters Query= NC_021772.1 Length=72394 Score E Sequences producing significant alignments: (Bits) Value seq773576 93.3 2e-14 >seq773576 Length=412 Score = 93.3 bits (102), Expect = 2e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 51528 CAATGGTAGCACCAGCAGCATCAATACCTTGGTCGTTAACGTTACGGTCATCTAACAGTG 51587 ||||||| | ||| |||||||||||||||||||| | ||| |||||| | ||| | Sbjct 199 CAATGGTCACGCCATTGGCATCAATACCTTGGTCGTTGATGTTGGCGTCATCCAGCAGGG 258 Query 51588 GTACATAGTGATACAGCTTAATTTGTTTACCCATGTTCTTAGGCATGTTGGTAACTTCAG 51647 | | ||||| || ||| || | ||||| | |||||| ||||| || || |||| Sbjct 259 GGATGTAGTGGAACTTCTTGATCTTCTTACCGAAGTTCTTCGGCATAGAAGTCACATCAG 318 Query 51648 CCAACTGACCAAAGTACATTTCTTTAGCTGCATCAACCAGTGCTTTCTTGTAGTAGTAGT 51707 | | ||| |||||| |||||| || |||| || |||| || | || || | Sbjct 319 CAAGCTGCTGAAAGTATTGCTCTTTACGAGCTTCAATCAAAGCTTGTTTCTGATAATACT 378 Query 51708 CCAGACGAATCTGAGGACCAATACTAGAAGG 51738 | | |||||||||||||| |||||||| Sbjct 379 GAACATTGATCTGAGGACCAATGCTAGAAGG 409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 228046323053075