Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudotsuga_20menziesii_20[genbank_20GCA_5F001517045.1_202015-12-22] 1,236,665 sequences; 14,673,225,455 total letters Query= NC_021782.1 Length=72098 Score E Sequences producing significant alignments: (Bits) Value seq773576 96.9 2e-15 >seq773576 Length=412 Score = 96.9 bits (106), Expect = 2e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 45953 CAATGGTAGCACCAGCAGCATCAATACCTTGGTCGTTAACGTTACGGTCATCTAACAGTG 46012 ||||||| | ||| |||||||||||||||||||| | ||| |||||| | ||| | Sbjct 199 CAATGGTCACGCCATTGGCATCAATACCTTGGTCGTTGATGTTGGCGTCATCCAGCAGGG 258 Query 46013 GTACATAGTGATACAGCTTAATTTGTTTACCCATGTTCTTAGGCATGTTAGTAACTTCAG 46072 | | ||||| || ||| || | ||||| | |||||| ||||| ||| || |||| Sbjct 259 GGATGTAGTGGAACTTCTTGATCTTCTTACCGAAGTTCTTCGGCATAGAAGTCACATCAG 318 Query 46073 CCAACTGACCAAAGTACATTTCTTTAGCTGCATCAACCAGTGCTTTCTTGTAGTAGTAGT 46132 | | ||| |||||| |||||| || |||| || |||| || | || || | Sbjct 319 CAAGCTGCTGAAAGTATTGCTCTTTACGAGCTTCAATCAAAGCTTGTTTCTGATAATACT 378 Query 46133 CCAGACGAATCTGAGGACCAATACTAGAAGG 46163 | | |||||||||||||| |||||||| Sbjct 379 GAACATTGATCTGAGGACCAATGCTAGAAGG 409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 227113399113835