Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudotsuga_20menziesii_20[genbank_20GCA_5F001517045.1_202015-12-22] 1,236,665 sequences; 14,673,225,455 total letters Query= NC_022750.1 Length=33628 Score E Sequences producing significant alignments: (Bits) Value seq976086 82.4 2e-11 >seq976086 Length=346 Score = 82.4 bits (90), Expect = 2e-11 Identities = 118/164 (72%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 17973 GACCTTGTGGCGCTGGCCGGTAAGGTGGTCGGTTTTTTGTCGCCGAACTCGGTGCAGT-G 18031 ||||| | ||||||| ||| |||||| ||||||||||| | |||| |||| | | | Sbjct 226 GACCTGATTGCGCTGGGCGGAAAGGTGATCGGTTTTTTGCAGTCGAAGTCGGACGAATAG 167 Query 18032 ACGTTCCCGAAAAATCTGTCGGTCGATGACCTGATGGCGGATGTGGCAGTGATATTTCAC 18091 || | ||| | ||| ||||| | ||||||||||| ||| | || ||||||||||| Sbjct 166 AC-TGGCCGCACGGCCTGACGGTCAACGACCTGATGGCCGATATTGCCATGATATTTCAC 108 Query 18092 TGGCCGCCATCAGAACTGTATCCCATGAGCCTGACCGAACTCAT 18135 |||| || || || |||| |||| ||| |||| || || Sbjct 107 TGGCAACCCTCCGAGATGTACGACATGCCGCTGGCCGAGCTGAT 64 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 105909496060700