Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudotsuga_20menziesii_20[genbank_20GCA_5F001517045.1_202015-12-22] 1,236,665 sequences; 14,673,225,455 total letters Query= NC_023581.1 Length=77792 Score E Sequences producing significant alignments: (Bits) Value seq308694 95.1 6e-15 >seq308694 Length=301 Score = 95.1 bits (104), Expect = 6e-15 Identities = 163/234 (70%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 74628 GTTGCAAAGTCAGTAGTGATATAGAAATTAAATGAATCCTTATTAGCCATAAGAGTTCTT 74687 || ||||||||||| ||||| ||||| |||||| ||||| || || || || Sbjct 57 GTAGCAAAGTCAGTGGTGATGTAGAAGTTAAATCGTTCCTTGTTCTTCAGAATAGAATCC 116 Query 74688 AAACTATACCAACGGATATCACTCTCTTGAATCAATCGGTCATCATCACTCATGATTCGT 74747 || || |||||| ||||||| |||||||||| || || || ||| |||||||||| Sbjct 117 AACTTAAACCAACCAATATCACCATCTTGAATCATGCGATCTTCTTCAGACATGATTCGT 176 Query 74748 AACATAAGTTCCTGGTTAAAGCCTGCAATAGTACC-TTCACCAATAGCCATATCATAAGT 74806 | ||| || |||||||| ||| | | | ||| || | || ||| | ||||| Sbjct 177 AGCATTAGCTCCTGGTTGAAGGTATCCACACGACCACTCTTC-ATGGCCTTGTCATACTC 235 Query 74807 ACGTTTCACATAATCATAAGTAAAACGGTCAGGCCATGATCCCCGGAATTCCTC 74860 | | || || ||||| || ||||| |||||||| || || | ||| || || Sbjct 236 ATCCCTGACGTACTCATACGTGAAACGATCAGGCCAGGAACCTCTGAAGTCTTC 289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 245059577863945