Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudotsuga_20menziesii_20[genbank_20GCA_5F001517045.1_202015-12-22] 1,236,665 sequences; 14,673,225,455 total letters Query= NC_024786.1 Length=71248 Score E Sequences producing significant alignments: (Bits) Value seq773576 82.4 3e-11 >seq773576 Length=412 Score = 82.4 bits (90), Expect = 3e-11 Identities = 116/163 (71%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 54714 ATGGTAGCACCATTAGCATCAATACCCTGGTCGTTGATGTTCTTATCATCAAGCAGTGGA 54773 ||||| | ||||| ||||||||||| |||||||||||||| ||||| ||||| || Sbjct 201 ATGGTCACGCCATTGGCATCAATACCTTGGTCGTTGATGTTGGCGTCATCCAGCAGGGGG 260 Query 54774 ACGTACTCATACACCTTAACAGTCTTACCGTAGTTCTTCGGCATGTTGATGGTGTTAGCC 54833 | ||| | || ||| | |||||||| ||||||||||||| | | ||| Sbjct 261 ATGTAGTGGAACTTCTTGATCTTCTTACCGAAGTTCTTCGGCATAGAAGTCACATCAGCA 320 Query 54834 AGTGGCATGAAGTACTGGTCTTTACGAGACTGAATAATAGCTT 54876 || || ||||| || |||||||||| | ||| | ||||| Sbjct 321 AGCTGCTGAAAGTATTGCTCTTTACGAGCTTCAATCAAAGCTT 363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 224434394558585