Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudotsuga_20menziesii_20[genbank_20GCA_5F001517045.1_202015-12-22] 1,236,665 sequences; 14,673,225,455 total letters Query= NC_025115.1 Length=40002 Score E Sequences producing significant alignments: (Bits) Value seq976086 91.5 4e-14 >seq976086 Length=346 Score = 91.5 bits (100), Expect = 4e-14 Identities = 127/173 (73%), Gaps = 4/173 (2%) Strand=Plus/Minus Query 26229 CTGCGCGGCGTGAGCCTGATGGACCTGATGCGCAT-GGACGTGACCGCCCTGCACACGGT 26287 |||||||||||| ||||| |||||| ||| | |||||| |||||||| ||| || Sbjct 346 CTGCGCGGCGTGCGCCTGGCCGACCTG-TGCCAGTCGGACGTTGACGCCCTGCTCACCGT 288 Query 26288 GCTGCCGCGCATCACCACGCCGACGCTGACCACCGCCGACGTGAGCCGC-CTGGATCCGG 26346 |||||| ||||| ||| ||| | ||||| | ||||| ||| || || ||||||| Sbjct 287 GCTGCCCCGCATTACCCTGCCAGCACTGACAAAGGCCGA-GTGTAATGCTCTTGATCCGG 229 Query 26347 CCGACCTGACCCAACTGGCCGTCGAGGTGACCGGTTTTTTGCTGACGAAGGCG 26399 ||||||| |||| || |||||| ||||||||||| | ||||| || Sbjct 228 TAGACCTGATTGCGCTGGGCGGAAAGGTGATCGGTTTTTTGCAGTCGAAGTCG 176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126006760957720