Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudotsuga_20menziesii_20[genbank_20GCA_5F001517045.1_202015-12-22] 1,236,665 sequences; 14,673,225,455 total letters Query= NC_027381.1 Length=68365 Score E Sequences producing significant alignments: (Bits) Value seq773576 111 7e-20 >seq773576 Length=412 Score = 111 bits (122), Expect = 7e-20 Identities = 146/200 (73%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 49057 CCATCAGCATTAATACCTTGGTCATTCATGTTACGGTCATCCAGTAACGGAACATAATGG 49116 |||| |||| |||||||||||| || ||||| ||||||||| | || | || ||| Sbjct 210 CCATTGGCATCAATACCTTGGTCGTTGATGTTGGCGTCATCCAGCAGGGGGATGTAGTGG 269 Query 49117 TACATCTTAAtttttttACCCATATGCTTTGGCATAGCAGTGACATCAGCAAGCTGGCTG 49176 || |||| || || ||||| | | ||| ||||||| ||| ||||||||||||| |||| Sbjct 270 AACTTCTTGATCTTCTTACCGAAGTTCTTCGGCATAGAAGTCACATCAGCAAGCT-GCTG 328 Query 49177 -AAGTACATTTCTTTTGCTGCATCTACCAAAGCCTTCTTATAGTAATAATCCAGACGAAT 49235 ||||| ||||| || || | |||||| | || | ||||| | | | || Sbjct 329 AAAGTATTGCTCTTTACGAGCTTCAATCAAAGCTTGTTTCTGATAATACTGAACATTGAT 388 Query 49236 CTGAGGACCAATGGTAGAAG 49255 ||||||||||||| |||||| Sbjct 389 CTGAGGACCAATGCTAGAAG 408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 215347841461190