Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudotsuga_20menziesii_20[genbank_20GCA_5F001517045.1_202015-12-22] 1,236,665 sequences; 14,673,225,455 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq551685 86.0 2e-11 >seq551685 Length=11734 Score = 86.0 bits (94), Expect = 2e-11 Identities = 111/152 (73%), Gaps = 1/152 (1%) Strand=Plus/Minus Query 443710 GACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCATC 443769 ||||||| || ||||| | ||||| | || || ||| |||| |||||||| Sbjct 7228 GACTAGTTGCCTTTGCCTCCATTGAAGGTGTCTTTTTCTCCGGTTCCTTT-GCCTCCATT 7170 Query 443770 TTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAGT 443829 ||||||||||||||| | || | |||| |||| | |||||| |||||| ||||| || Sbjct 7169 TTCTGGTTGAAAAAGAGAGGTATGATGCCCGGTTTAACCTTTTCCAACGAATTGATCTGT 7110 Query 443830 CGGGACGAGGGTTTGCATTGCGACTTCGCCTG 443861 | ||||| |||||||| |||||| || || Sbjct 7109 AGAGACGAAGGTTTGCACACCGACTTTGCATG 7078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1563169180900925