Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201
4-08-01] 374 sequences; 22,924,637 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq99 113 5e-20
>seq99
Length=333813
Score = 113 bits (124), Expect = 5e-20
Identities = 228/331 (69%), Gaps = 7/331 (2%)
Strand=Plus/Minus
Query 16985 CCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTC 17044
||||| || | | ||| || ||||| || || |||| ||| ||||| || || |||
Sbjct 93384 CCCTCATCGCGGGAGATGAGCTCGTTGGAGAAGGTCAGCCCCGGCATGAGCCCCCGCTTC 93325
Query 17045 TTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAAC 17104
|| | ||| | || | | ||| || || || |||||||| ||||| ||| | |||||
Sbjct 93324 TTCACCCAGTAGATGGAGCAGAAGGAGCCGGAGAAGAATATGCCCTCCACGCAGGCAAAG 93265
Query 17105 GCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGA-ATCCATTTCTGCACCCACTC 17163
|||| | || |||||| | |||| ||| | | ||| ||||| ||| || |||| ||
Sbjct 93264 GCGACCAGGCGCTCGGCGAA--TCGC-TCTGCGCT-CGAGATCCACTTCAGCGCCCAGTC 93209
Query 17164 GGCTTTTTGCTTTATGCAATCC-ATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCT 17222
||| || | ||| | || | | ||| || |||| | || | | || || | |
Sbjct 93208 GGCCTTCTTCTTGAC-CACTGGTACCGTCTCGGTGGCGTGGAACAGCATGTCCTTCTGCC 93150
Query 17223 GTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCA 17282
| |||| | || |||| ||| | || ||||||||||| ||| ||| |||||||| |
Sbjct 93149 GCGGGTCCTTGATGTACGCATCCAGCAGCAGGCTGTACATCTCGCTGTGGATGTTCTCGA 93090
Query 17283 TGGCTATCTGAAATCCGTAAAAGCATCGGGC 17313
|||| ||||| || ||||| ||| |||||
Sbjct 93089 TGGCGATCTGGAAGCCGTAGAAGGCGCGGGC 93059
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517543180474320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |