Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201
4-08-01] 374 sequences; 22,924,637 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq133 100 2e-16
>seq133
Length=726431
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 21245 CACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCAAAATGTCTCCA 21304
||||| | |||| ||||| ||||| || ||| |||| ||||| || | |||
Sbjct 23485 CACCCACCCACCCCGGTAGTCGGCGTGCATGCCGGCGTAGGCCGCGCCAAAGTGGCGCCA 23544
Query 21305 CTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTCCCCGAAGCCCTGCGCCGC 21364
|||||| ||||||||||| ||||| |||||||| ||||| || | ||| |||| |
Sbjct 23545 CTGGAAGCCGTACACCGGACCCAGGTCGCCCTCCTCGCGGTGTCCCAGGCCGCGCGCGTC 23604
Query 21365 CAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTACGCCGCGGCGCGACAGTTCGGT 21424
|| || |||| ||||||| ||||||| || | ||||||||| | ||| |
Sbjct 23605 CAGGAACTCGCGCGACCCGTTGCCGTCCCAGATGTGCACGCCGCGGTCGGCCAGCAGGCG 23664
Query 21425 GGAGTCGGTGGAGCCCCTGATAAACCACAGCAACTCCTCCACGACGCC 21472
| || ||| | ||| || |||||| |||| |||||| | |||||
Sbjct 23665 CGCGTTGGTCGCGCCGGAGACAAACCAGAGCAGCTCCTCAGCCACGCC 23712
Score = 93.3 bits (102), Expect = 4e-14
Identities = 83/104 (80%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 21018 GTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTCGGCGGACCTC 21077
|| |||||||||||| |||||||| || || ||||| ||||| | ||||||||| | |
Sbjct 22010 GTGAGGAGGGCGTAGGATGCGATGTTGAAGGGCACCCCCAGGCCGAGGTCGGCGGAGCGC 22069
Query 21078 TGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAAAACTG 21121
||||||| |||||| |||||||| || |||||| | |||||
Sbjct 22070 TGGTACATCTGGCACGACAGCTCGCCGTCTGCCACGAAGAACTG 22113
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427774050143520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |