Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201 4-08-01] 374 sequences; 22,924,637 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq43 105 5e-18 >seq43 Length=247289 Score = 105 bits (116), Expect = 5e-18 Identities = 119/157 (76%), Gaps = 2/157 (1%) Strand=Plus/Minus Query 33561 GATACGCATACCAGAGATGGGCGACAAGTTTGCATCGTT-CACGGCCCAGAAGGGCACGT 33619 ||| || || || || | |||||||| ||||| ||| ||||| | |||||||||| Sbjct 47902 GATCCGTATCCCCCAGGTAGGCGACAAATTTGCTTCGCGGCACGGGC-AGAAGGGCACCA 47844 Query 33620 GCGGCATGATGTACGACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACC 33679 |||||| | ||| |||| ||||||||| ||||| || || ||| | || || |||| Sbjct 47843 TCGGCATCACCTACACCCAGGAGGACATGCCCTTCACCGCGGAGGGCATCGTGCCCGACC 47784 Query 33680 TAGTCATCAACCCGCATGCGTTCCCCTCGCGCATGAC 33716 | ||||||||||||| || |||| ||||||||||| Sbjct 47783 TGATCATCAACCCGCACGCCATCCCGTCGCGCATGAC 47747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356231976242722