Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201
4-08-01] 374 sequences; 22,924,637 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq43 105 5e-18
>seq43
Length=247289
Score = 105 bits (116), Expect = 5e-18
Identities = 119/157 (76%), Gaps = 2/157 (1%)
Strand=Plus/Minus
Query 33561 GATACGCATACCAGAGATGGGCGACAAGTTTGCATCGTT-CACGGCCCAGAAGGGCACGT 33619
||| || || || || | |||||||| ||||| ||| ||||| | ||||||||||
Sbjct 47902 GATCCGTATCCCCCAGGTAGGCGACAAATTTGCTTCGCGGCACGGGC-AGAAGGGCACCA 47844
Query 33620 GCGGCATGATGTACGACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACC 33679
|||||| | ||| |||| ||||||||| ||||| || || ||| | || || ||||
Sbjct 47843 TCGGCATCACCTACACCCAGGAGGACATGCCCTTCACCGCGGAGGGCATCGTGCCCGACC 47784
Query 33680 TAGTCATCAACCCGCATGCGTTCCCCTCGCGCATGAC 33716
| ||||||||||||| || |||| |||||||||||
Sbjct 47783 TGATCATCAACCCGCACGCCATCCCGTCGCGCATGAC 47747
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356231976242722
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |