Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201 4-08-01] 374 sequences; 22,924,637 total letters Query= NC_003521.1 Length=241087 Score E Sequences producing significant alignments: (Bits) Value seq361 84.2 3e-11 >seq361 Length=163187 Score = 84.2 bits (92), Expect = 3e-11 Identities = 98/130 (75%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 77361 CAGCAGGGTGGAGTAGCACAGGTTGTGGGCCATGATGATGGAGGGGTAGAGGCTGGCGAA 77420 |||||| |||| ||||||||||||||| ||||| |||||| ||| || |||||||| || Sbjct 65043 CAGCAGCGTGGTGTAGCACAGGTTGTGCGCCATCATGATGCTGGGATACAGGCTGGCAAA 65102 Query 77421 GTCGAAGACCGCCA-CGGGGTCGTTGTAGTAGCCCACCACGGGCTCGAAGACGGTGGCAC 77479 ||| | |||| ||| |||| |||||| || | ||||| | || ||||||| Sbjct 65103 GTCCAGCGTGGCCACCGGAGTCG-CGTAGTACCCAGCTTTTGGCTCCAGTACCGTGGCAC 65161 Query 77480 CCTGGTAGGC 77489 ||| ||| || Sbjct 65162 CCTCGTACGC 65171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 771346793936880