Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201
4-08-01] 374 sequences; 22,924,637 total letters
Query= NC_005336.1
Length=139962
Score E
Sequences producing significant alignments: (Bits) Value
seq43 82.4 7e-11
>seq43
Length=247289
Score = 82.4 bits (90), Expect = 7e-11
Identities = 81/105 (77%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 5380 GTTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAGCGCCCAC 5439
||| || || |||||||| |||||||||| |||||| ||||| | |||||||||||
Sbjct 70979 GTTGAAAAGGACCACCCCCACATTGCCTCTGTAGTCCTCGTCCACCACGCCAGCGCCGGT 70920
Query 5440 GTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCG 5484
||| || |||| || || || |||||||| || || || | |||
Sbjct 70919 GTCTATGAAGTTCTTCACTGCGAGGCCGGAGCGCGGGGCCACGCG 70875
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447748306766880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |