Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201 4-08-01] 374 sequences; 22,924,637 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq43 96.9 3e-15 >seq43 Length=247289 Score = 96.9 bits (106), Expect = 3e-15 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 5626 GAAATCGTTGTGGCCGAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTC 5685 ||| ||| || || | |||||| || ||||| ||||| ||||| | |||||| |||| Sbjct 70997 GAAGTCGACGTCGCTGTGGTTGAAAAGGACCACCCCCACATTGCCTCTGTAGTCCTCGTC 70938 Query 5686 TATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCAC 5745 | |||||| ||||| ||| ||||||| ||| || || ||||||||||| || ||||| Sbjct 70937 CACCACGCCAGCGCCGGTGTCTATGAAGTTCTTCACTGCGAGGCCGGAGCGCGGGGCCAC 70878 Query 5746 GCG 5748 ||| Sbjct 70877 GCG 70875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430052439758288