Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201
4-08-01] 374 sequences; 22,924,637 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq43 96.9 3e-15
>seq43
Length=247289
Score = 96.9 bits (106), Expect = 3e-15
Identities = 95/123 (77%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 5626 GAAATCGTTGTGGCCGAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTC 5685
||| ||| || || | |||||| || ||||| ||||| ||||| | |||||| ||||
Sbjct 70997 GAAGTCGACGTCGCTGTGGTTGAAAAGGACCACCCCCACATTGCCTCTGTAGTCCTCGTC 70938
Query 5686 TATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCAC 5745
| |||||| ||||| ||| ||||||| ||| || || ||||||||||| || |||||
Sbjct 70937 CACCACGCCAGCGCCGGTGTCTATGAAGTTCTTCACTGCGAGGCCGGAGCGCGGGGCCAC 70878
Query 5746 GCG 5748
|||
Sbjct 70877 GCG 70875
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430052439758288
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |