Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201
4-08-01] 374 sequences; 22,924,637 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq88 82.4 5e-11
>seq88
Length=544131
Score = 82.4 bits (90), Expect = 5e-11
Identities = 130/181 (72%), Gaps = 4/181 (2%)
Strand=Plus/Minus
Query 44369 GTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGACAAGTTTGCGTCGTTC 44428
||||||||| | || || | | ||| ||| ||| ||||||||||||| | || |
Sbjct 449466 GTCAAGGTGCTGGTGCGGCACACACGGCGCCCCGAGCTGGGCGACAAGTTCTCCTCTCGC 449407
Query 44429 -ACGGCGCAAAAGGG-GACATGCGGAGCCGTCCTGACCCAGGAGGACATGCCCTTCGACA 44486
||||| || ||||| | | || || || || || ||| ||| | |||||| |
Sbjct 449406 CACGGC-CAGAAGGGCGTGGTTGGGTGCA-TCGTGCCCGAGGCCGACCTCCCCTTCTCCG 449349
Query 44487 AAAACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGATGACCG 44546
| |||||||||||||||||| ||||| ||||| |||| ||| |||||| | ||||| |
Sbjct 449348 AGCGCGGGGTGGTGCCCGACCTGATCATGAACCCGCACGGCTTCCCCTCCCGCATGACTG 449289
Query 44547 T 44547
|
Sbjct 449288 T 449288
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340136049610302
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |