Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201
4-08-01] 374 sequences; 22,924,637 total letters
Query= NC_005946.1
Length=105903
Score E
Sequences producing significant alignments: (Bits) Value
seq88 87.8 1e-12
>seq88
Length=544131
Score = 87.8 bits (96), Expect = 1e-12
Identities = 131/181 (72%), Gaps = 4/181 (2%)
Strand=Plus/Plus
Query 71416 ACGGTCATCCTGGAGGGAAAGGCGTGGGGGTTGATGATGAGGTCGGGCACCACCCCGTCC 71475
|| ||||| | |||||| ||| |||| ||||| ||||| |||||||||||||||||| |
Sbjct 449288 ACAGTCATGCGGGAGGGGAAGCCGTGCGGGTTCATGATCAGGTCGGGCACCACCCCGCGC 449347
Query 71476 TTGTCGAAGGGCATGTCCTCCTGGGTCAGGACAGCTCCGCATGTC-CCCTTTTGCGCCGT 71534
| | |||||| | ||| ||| || || || || || | | ||||| || |||||
Sbjct 449348 TCGGAGAAGGGGAGGTCGGCCTCGGGCACGA-TGCACCCAACCACGCCCTTCTG-GCCGT 449405
Query 71535 -GAATGACGCAAACTTGTCGCCCATCTCTGGGTGCCTGGGGGTCCTCAGCCTCACCTTGA 71593
| || | ||||||||||||| ||| ||| ||| | | || || | ||||||||
Sbjct 449406 GGCGAGAGGAGAACTTGTCGCCCAGCTCGGGGCGCCGTGTGTGCCGCACCAGCACCTTGA 449465
Query 71594 C 71594
|
Sbjct 449466 C 449466
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338763255867696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |