Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201 4-08-01] 374 sequences; 22,924,637 total letters Query= NC_006273.2 Length=235646 Score E Sequences producing significant alignments: (Bits) Value seq361 96.9 5e-15 >seq361 Length=163187 Score = 96.9 bits (106), Expect = 5e-15 Identities = 105/137 (77%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 79704 CCCGGCACCAGCAGGGTGGAGTAGCAGAGGTTGTGAGCCATGATGATGGAAGGGTAGAGG 79763 ||| || |||||| |||| |||||| |||||||| ||||| |||||| || || ||| Sbjct 65035 CCCCGCGGCAGCAGCGTGGTGTAGCACAGGTTGTGCGCCATCATGATGCTGGGATACAGG 65094 Query 79764 CTGGCAAAGTCGAACACGGCCA-CGGGGTCGTTGTAGTAACCCACCTCGGGCTCAAACAC 79822 ||||||||||| | | ||||| ||| |||| |||||| || | | ||||| | || Sbjct 65095 CTGGCAAAGTCCAGCGTGGCCACCGGAGTCG-CGTAGTACCCAGCTTTTGGCTCCAGTAC 65153 Query 79823 CGTGGCGCCCTGGTACG 79839 |||||| |||| ||||| Sbjct 65154 CGTGGCACCCTCGTACG 65170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 753935675334240