Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201
4-08-01] 374 sequences; 22,924,637 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq133 95.1 1e-14
>seq133
Length=726431
Score = 95.1 bits (104), Expect = 1e-14
Identities = 162/235 (69%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 94775 TACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAA 94834
|||| || || | || |||| ||||| ||||| || || ||||| || | ||| ||
Sbjct 170685 TACATGCCGCCGCGCAGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAG 170744
Query 94835 TCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCT 94894
||| || ||| | ||||| ||||| || ||| ||||||| | | ||||| ||
Sbjct 170745 TCGGACAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCG 170804
Query 94895 GGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG 94954
||||| || || || ||||| | || || ||||| || | | | ||||| | |
Sbjct 170805 GGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCAATGGTGTCGGAGGAC 170864
Query 94955 TCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
|| || || | ||| ||||| || || || || || || || |||||||||||||
Sbjct 170865 TCCACTTCGAGCGTAATGGTCTTGCCCGTCAGCGTCTTGACGAAGATCTGCATGC 170919
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448289104238640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |