Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201 4-08-01] 374 sequences; 22,924,637 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq43 102 1e-16 >seq43 Length=247289 Score = 102 bits (112), Expect = 1e-16 Identities = 114/150 (76%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 15050 CCCGAGATTGGCGACAAGTTTTGCTCT-GGTATGGCGCAAAAGGGCACGTGCGGCATGAT 15108 ||| || | |||||||| ||| || || | || ||| |||||||| |||||| | Sbjct 47892 CCCCAGGTAGGCGACAAATTTGCTTCGCGGCACGG-GCAGAAGGGCACCATCGGCATCAC 47834 Query 15109 TTTCCCCCAGGAAGACATGCCCTTTACCGCGTCAGGCATGACGCCCGACATTATCATCAA 15168 | | ||||||| ||||||||||| |||||| ||||| ||||||| | |||||||| Sbjct 47833 CTACACCCAGGAGGACATGCCCTTCACCGCGGAGGGCATCGTGCCCGACCTGATCATCAA 47774 Query 15169 CCCCAACTGCATCCCGTCCCGCATGACCAT 15198 ||| || ||||||||| ||||||||||| Sbjct 47773 CCCGCACGCCATCCCGTCGCGCATGACCAT 47744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611389141742400