Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201
4-08-01] 374 sequences; 22,924,637 total letters
Query= NC_008187.1
Length=191100
Score E
Sequences producing significant alignments: (Bits) Value
seq43 102 1e-16
>seq43
Length=247289
Score = 102 bits (112), Expect = 1e-16
Identities = 114/150 (76%), Gaps = 2/150 (1%)
Strand=Plus/Minus
Query 15050 CCCGAGATTGGCGACAAGTTTTGCTCT-GGTATGGCGCAAAAGGGCACGTGCGGCATGAT 15108
||| || | |||||||| ||| || || | || ||| |||||||| |||||| |
Sbjct 47892 CCCCAGGTAGGCGACAAATTTGCTTCGCGGCACGG-GCAGAAGGGCACCATCGGCATCAC 47834
Query 15109 TTTCCCCCAGGAAGACATGCCCTTTACCGCGTCAGGCATGACGCCCGACATTATCATCAA 15168
| | ||||||| ||||||||||| |||||| ||||| ||||||| | ||||||||
Sbjct 47833 CTACACCCAGGAGGACATGCCCTTCACCGCGGAGGGCATCGTGCCCGACCTGATCATCAA 47774
Query 15169 CCCCAACTGCATCCCGTCCCGCATGACCAT 15198
||| || ||||||||| |||||||||||
Sbjct 47773 CCCGCACGCCATCCCGTCGCGCATGACCAT 47744
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 611389141742400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |