Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201
4-08-01] 374 sequences; 22,924,637 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq133 98.7 9e-16
>seq133
Length=726431
Score = 98.7 bits (108), Expect = 9e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| |||| || || |||| || ||||||||||||| ||
Sbjct 170917 ATGCAGATCTTCGTCAAGACGCTGACGGGCAAGACCATTACGCTCGAAGTGGAGTCCTCC 170858
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| || || ||||| || ||| ||||| || || || || || |||||
Sbjct 170857 GACACCATTGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAG 170798
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | || ||||||||||| || | || || | ||||| || ||| |||||
Sbjct 170797 CAGCGCCTGATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTGTCCGACTACAAC 170738
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| || || || ||||| || || | |||||
Sbjct 170737 ATCCAGAAGGAGTCCACCCTGCACCTGGTGCT 170706
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433326024836810
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |