Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201 4-08-01] 374 sequences; 22,924,637 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq90 122 1e-22 seq99 116 4e-21 >seq90 Length=671320 Score = 122 bits (134), Expect = 1e-22 Identities = 152/208 (73%), Gaps = 3/208 (1%) Strand=Plus/Minus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || ||| || ||||| |||||||||||||| || || |||||| || || Sbjct 288501 GGCAAAGTCGGTGTGCAGGCCCTCATCACGGGAGATGAGCTCGTTTGAGAAGGTGAGGCC 288442 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 |||||||| ||||||||| | |||| | || |||||||| || || ||||||| ||| Sbjct 288441 GGGCATGAGGTGCCGCTTCTTGAGCCAGTAGATGGCACAAAAGGAGCCGGAGAAGAGGAT 288382 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAA 126225 |||||||| || || || || | || |||| || | ||| ||| || | | Sbjct 288381 GCCCTCCACGCAGGCAAAGGCCACCAGCCGCTGCGC---GAAGCTGGACCCGCTGCCGAT 288325 Query 126226 CCACTTCATCGCCCACTGCGCCTTTTTC 126253 |||| | | ||||||| |||||||||| Sbjct 288324 CCACCTGAGGGCCCACTCCGCCTTTTTC 288297 >seq99 Length=333813 Score = 116 bits (128), Expect = 4e-21 Identities = 157/215 (73%), Gaps = 9/215 (4%) Strand=Plus/Minus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || ||| || ||||| || ||||||||||| || || |||||| ||| || Sbjct 93403 GGCAAAGTCGGTGTGCAGGCCCTCATCGCGGGAGATGAGCTCGTTGGAGAAGGTCAGCCC 93344 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 |||||||| ||||||||||||| |||| | || | || || || || |||||||| || Sbjct 93343 CGGCATGAGCCCCCGCTTCTTCACCCAGTAGATGGAGCAGAAGGAGCCGGAGAAGAATAT 93284 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTG-TC-- 126222 |||||||| || || || || | || ||||| || | | || || || | || Sbjct 93283 GCCCTCCACGCAGGCAAAGGCGACCAGGCGCTCGGC---GAATCG---CTCTGCGCTCGA 93230 Query 126223 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGA 126257 | |||||||| |||||| | ||||| |||| || Sbjct 93229 GATCCACTTCAGCGCCCAGTCGGCCTTCTTCTTGA 93195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597350807371920