Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201 4-08-01] 374 sequences; 22,924,637 total letters Query= NC_011273.1 Length=164602 Score E Sequences producing significant alignments: (Bits) Value seq321 95.1 1e-14 >seq321 Length=177816 Score = 95.1 bits (104), Expect = 1e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 153180 GGCCACAACTACATCGGCACCGAGCATCTCCTGCTGGCCCTGATCCGCGAGGGTGAGGGC 153239 |||||||||||||| ||||| ||||| ||||||||| |||| | ||||||||||||||| Sbjct 34267 GGCCACAACTACATTGGCACGGAGCACATCCTGCTGGGCCTGCTGCGCGAGGGTGAGGGC 34208 Query 153240 GTGGGCTGCCAGGTGCTGGTGAAGCGCGGCGCGGA 153274 |||| || || ||||||| || | ||||| || Sbjct 34207 GTGGCCTCCCGCGTGCTGGAGACCCTGGGCGCCGA 34173 Score = 84.2 bits (92), Expect = 2e-11 Identities = 124/172 (72%), Gaps = 4/172 (2%) Strand=Plus/Minus Query 153012 GGCGTAGCCGCCAAGGCGCTGCAGGCGCTCGACATCAACCTGGAGGAGGTGCGTGCCGAG 153071 ||| | |||||||||| || || || | | | ||| ||| | || | ||||| ||| Sbjct 34707 GGCATCGCCGCCAAGGTCCTCAAGTCGATGGGCGTCACGCTGAAAGATGCGCGTGTGGAG 34648 Query 153072 GTCGAGGAGATCATCGGCCACGGCCAGCAGGCACCCA--CCGGGCACATCCCGTTCACCG 153129 |||||| |||||||||||| || ||| ||| ||| | | ||||| |||||| Sbjct 34647 GTCGAGAAGATCATCGGCCGGGGG-AGC-GGCTTTGTGGCCGTGGAGATCCCCTTCACCC 34590 Query 153130 ACCGCTCCAAGCGCGTCCTGGAGCTGTCGCTGCGCGAGGCGCTGCAGCTCGG 153181 |||| ||||||| || ||||||||||| ||| ||||| | |||||||| Sbjct 34589 CCCGCGCCAAGCGTGTGCTGGAGCTGTCCCTGGAGGAGGCTCGCCAGCTCGG 34538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 526595938152480