Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201
4-08-01] 374 sequences; 22,924,637 total letters
Query= NC_011273.1
Length=164602
Score E
Sequences producing significant alignments: (Bits) Value
seq321 95.1 1e-14
>seq321
Length=177816
Score = 95.1 bits (104), Expect = 1e-14
Identities = 78/95 (82%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 153180 GGCCACAACTACATCGGCACCGAGCATCTCCTGCTGGCCCTGATCCGCGAGGGTGAGGGC 153239
|||||||||||||| ||||| ||||| ||||||||| |||| | |||||||||||||||
Sbjct 34267 GGCCACAACTACATTGGCACGGAGCACATCCTGCTGGGCCTGCTGCGCGAGGGTGAGGGC 34208
Query 153240 GTGGGCTGCCAGGTGCTGGTGAAGCGCGGCGCGGA 153274
|||| || || ||||||| || | ||||| ||
Sbjct 34207 GTGGCCTCCCGCGTGCTGGAGACCCTGGGCGCCGA 34173
Score = 84.2 bits (92), Expect = 2e-11
Identities = 124/172 (72%), Gaps = 4/172 (2%)
Strand=Plus/Minus
Query 153012 GGCGTAGCCGCCAAGGCGCTGCAGGCGCTCGACATCAACCTGGAGGAGGTGCGTGCCGAG 153071
||| | |||||||||| || || || | | | ||| ||| | || | ||||| |||
Sbjct 34707 GGCATCGCCGCCAAGGTCCTCAAGTCGATGGGCGTCACGCTGAAAGATGCGCGTGTGGAG 34648
Query 153072 GTCGAGGAGATCATCGGCCACGGCCAGCAGGCACCCA--CCGGGCACATCCCGTTCACCG 153129
|||||| |||||||||||| || ||| ||| ||| | | ||||| ||||||
Sbjct 34647 GTCGAGAAGATCATCGGCCGGGGG-AGC-GGCTTTGTGGCCGTGGAGATCCCCTTCACCC 34590
Query 153130 ACCGCTCCAAGCGCGTCCTGGAGCTGTCGCTGCGCGAGGCGCTGCAGCTCGG 153181
|||| ||||||| || ||||||||||| ||| ||||| | ||||||||
Sbjct 34589 CCCGCGCCAAGCGTGTGCTGGAGCTGTCCCTGGAGGAGGCTCGCCAGCTCGG 34538
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 526595938152480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |