Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201 4-08-01] 374 sequences; 22,924,637 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq99 138 1e-27 seq203 86.0 7e-12 >seq99 Length=333813 Score = 138 bits (152), Expect = 1e-27 Identities = 126/159 (79%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332 |||||| || ||| || |||||||| ||||| || || || || |||||| || || Sbjct 93403 GGCAAAGTCGGTGTGCAGGCCCTCATCGCGGGAGATGAGCTCGTTGGAGAAGGTCAGCCC 93344 Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392 |||||||| ||||||||||||| ||| || || | |||||| || ||||||||||| || Sbjct 93343 CGGCATGAGCCCCCGCTTCTTCACCCAGTAGATGGAGCAGAAGGAGCCGGAGAAGAATAT 93284 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAA 117431 |||||||| || ||||| || | |||||||||||||| Sbjct 93283 GCCCTCCACGCAGGCAAAGGCGACCAGGCGCTCGGCGAA 93245 >seq203 Length=214014 Score = 86.0 bits (94), Expect = 7e-12 Identities = 111/151 (74%), Gaps = 2/151 (1%) Strand=Plus/Plus Query 169370 GAGAGGAAAGACGCCATAGTGATCACGTCCAACGACGGAGAGACCCGCGACCGCAAGGGT 169429 ||| || ||||||||||| | || | || || || ||| |||| || || ||||| Sbjct 137741 GAGGGGGAAGACGCCATACTTGTCTCTGCCGACAACACTGAGCCCCGAGATGGCCAGGGT 137800 Query 169430 TTTCGCTGAATCACCCTCCGTGACAATGAGGGTACAC-TTTCCAGATTGCGCCGTACCCG 169488 ||| || ||||| ||||| || | |||||||| ||| || |||||||| ||| | Sbjct 137801 TTTGGCCGAATCTCCCTCGGTCAGGATGAGGGTGCACGCCGCCGAATTGCGCC-CACCAG 137859 Query 169489 CCTTGTTTGCGTCGTCCAACTTGGGAATACC 169519 | | ||| |||||||||| ||||||||| || Sbjct 137860 CGTCGTTGGCGTCGTCCAGCTTGGGAATGCC 137890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589978041839760