Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201
4-08-01] 374 sequences; 22,924,637 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq133 89.7 3e-13
>seq133
Length=726431
Score = 89.7 bits (98), Expect = 3e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||| | ||| || ||||| ||||| ||||| || ||| | || | || ||
Sbjct 170709 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCG 170768
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || |||||||| || || || |||||||| | || | |||||||||||
Sbjct 170769 AGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGG 170828
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
||||| || || | || | || || ||| || |||| || ||||| ||
Sbjct 170829 ATCTTGGCCTTCACATTGTCAATGGTGTCGGAGGACTCCACTTCGAGCGTAATGGTCTTG 170888
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
||||| || ||||| || |||||||||||
Sbjct 170889 CCCGTCAGCGTCTTGACGAAGATCTGCAT 170917
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324632120279472
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |