Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201 4-08-01] 374 sequences; 22,924,637 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq99 138 1e-27 >seq99 Length=333813 Score = 138 bits (152), Expect = 1e-27 Identities = 126/159 (79%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 65071 TTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTC 65130 |||||||||||||| | || ||||| || |||||||| || ||||||||||| || ||| Sbjct 93245 TTCGCCGAGCGCCTGGTCGCCTTTGCCTGCGTGGAGGGCATATTCTTCTCCGGCTCCTTC 93304 Query 65131 TGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAA 65190 ||| | || || ||| ||||||||||||| |||||||| || || |||||| || || Sbjct 93305 TGCTCCATCTACTGGGTGAAGAAGCGGGGGCTCATGCCGGGGCTGACCTTCTCCAACGAG 93364 Query 65191 CTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCC 65229 || || ||||| |||||||| || ||| || |||||| Sbjct 93365 CTCATCTCCCGCGATGAGGGCCTGCACACCGACTTTGCC 93403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596566811037120