Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201
4-08-01] 374 sequences; 22,924,637 total letters
Query= NC_021071.1
Length=177211
Score E
Sequences producing significant alignments: (Bits) Value
seq243 639 2e-178
>seq243
Length=18593
Score = 639 bits (708), Expect = 2e-178
Identities = 714/954 (75%), Gaps = 0/954 (0%)
Strand=Plus/Plus
Query 67368 TCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCCAAGTCCTGCTCTG 67427
|| || ||||| ||||| || ||||| || |||||||||||||| ||||| || | |
Sbjct 2870 TCTAGTGGGAAATTGTGTGCATTACGTTCATGCATAACTTCCATACCAAGATTAGCACGG 2929
Query 67428 TTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCGTCAACGACGGATTGGTTG 67487
|||| || || |||||||| ||| || ||| || ||||| || ||||||||
Sbjct 2930 TTAATAATATCAGCCCAAGTGTTAATAACACGACCTTGTGAATCAACTACTGATTGGTTA 2989
Query 67488 AAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCCATTGCAGTGAACCAGATG 67547
||||||||||| || | ||| |||||||||||||| | ||| | ||||| ||||| ||
Sbjct 2990 AAGTTGAAACCATTTAAGTTAAATGCCATAGTTGAAATACCTAAAGCAGTAAACCAAATA 3049
Query 67548 CAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTTGAGTTGTTGAAAGATGCA 67607
| || || || | ||||| | ||||||||| | | | ||||| || ||||||||
Sbjct 3050 CCAACAACTGGCCAAGCAGCTAAGAAGAAGTGTAAAGAACGAGAGTTATTAAAAGATGCG 3109
Query 67608 TACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAATGTTGTAAGTCTCTTCT 67667
|| ||||| || || |||||||| |||||||||||||| || ||||||||||| ||||||
Sbjct 3110 TATTGGAAAATTAAACGACCGAAATATCCATGAGCAGCTACGATGTTGTAAGTTTCTTCT 3169
Query 67668 TCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGTAGTTTCTCTGATAAGA 67727
| ||||||||| |||||||| ||| || || | ||||| ||||| | || | |
Sbjct 3170 TGTTGTCCGAATTTGTAACCAACGTTAGCAGATTCGTTTTCAGTTGTTTCACGAATTAAA 3229
Query 67728 GAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAACCACCGAATACACCTGCT 67787
|||||||| || | ||||| ||||| ||| ||| | ||||||||| |||||||| ||
Sbjct 3230 GAAGAAGTTACTAATGAACCATGCATTGCAGAAAATAATGAACCACCAAATACACCAGCA 3289
Query 67788 ACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCTGCTTGGAACACGAACATG 67847
|| ||||||||||||||||||||||| | ||||| || ||||||||||| |||| |||
Sbjct 3290 ACACCAAGCATATGGAATGGGTGCATTAAAATGTTATGTTCTGCTTGGAATACGATCATA 3349
Query 67848 TAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTCAGAGAAAGAACCTTGACCGAAA 67907
| || ||||||||||||||||| | ||||| | |||||||| |||||||| || |
Sbjct 3350 AAATTGAAAGTACCAGAAATACCTAATGGCATACCATCAGAGAATGAACCTTGTCCAATT 3409
Query 67908 GGATAGACCAAGAACACAGCGAATGCTGCAGACACTGGAGCAGAGTATGCTACACAGATC 67967
||||| | | ||| ||||| ||||||| || || || || || || || ||||
Sbjct 3410 GGATAAATAATGAATACAGCAGTAGCTGCAGCAACAGGTGCTGAATAAGCAACTGCGATC 3469
Query 67968 CAAGGACGCATACCAAGACGGTAAGAAAGTTCCCACTGACGACCACAGTATGCTGTGATT 68027
|| ||||||||||| | |||| |||| | |||||| | |||||| ||||| |||
Sbjct 3470 CACGGACGCATACCTAAACGGAAAGATAATTCCCATTCACGACCCATGTATGAACAAATT 3529
Query 68028 CCGATAAGGAAGTGGAAGACTACAAGTTGGAAAGGTCCACCATTATACAACCACTCATCT 68087
|| | | ||||| | || | ||||||| |||||||||||||||| ||||| || ||
Sbjct 3530 CCTAAGAAAAAGTGACATACGATAAGTTGGTAAGGTCCACCATTATATAACCATTCGTCA 3589
Query 68088 AGAGTTGCTGCTTCCCAGATAGGATAGAAGTGAAGACCGATTGCGTTTGAACTAGGAACA 68147
|||| || ||||||||||| || || || || | ||| |||||||||||| | || ||
Sbjct 3590 AGAGAAGCAGCTTCCCAGATTGGGTAAAAATGTAAACCAATTGCGTTTGAAGTTGGTACT 3649
Query 68148 ACAGCACCAGAAATGATGTTGTTACCGTACATGAGCGAACCTGCAACAGGTTCTCTGATA 68207
||||| |||||||| ||||| || || || | | ||||||| || ||||| | |||
Sbjct 3650 ACAGCGCCAGAAATTATGTTATTTCCATATAGTAATGAACCTGATACTGGTTCGCGAATA 3709
Query 68208 CCATCGATATCAACTGGAGGTGCTGCAATGAATGCAATGATGAAGCAAGTTGCTGCTGCG 68267
||||| ||||| ||||| || || || || || || || || || ||| | |||||
Sbjct 3710 CCATCAATATCTACTGGCGGAGCAGCGATAAAAGCGATAATAAAAACAGTAGTTGCTGTT 3769
Query 68268 AGCAAGCAAGGAATCATCAACACACCGAACCAACCAACATAGATGCGATTGTCA 68321
| || ||| ||||| | ||||| |||||||||||||| | ||| || |||
Sbjct 3770 AATAATGTAGGGATCATAAGAACACCAAACCAACCAACATATAAGCGGTTTTCA 3823
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 566944549521840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |