Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201
4-08-01] 374 sequences; 22,924,637 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq84 107 6e-18
>seq84
Length=279745
Score = 107 bits (118), Expect = 6e-18
Identities = 188/271 (69%), Gaps = 2/271 (1%)
Strand=Plus/Plus
Query 302565 CATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTT 302624
||| | ||| ||||| ||| | | || ||||| || || || || | | || ||
Sbjct 192699 CATCAGGTCCTCCATGGCCTTCACCAGGCGGCGCTGGATGTAGCCCGTGCTGGCGGTCTT 192758
Query 302625 TACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGG 302684
|| || || || || | || |||| || ||||| || |||||||| | ||| | |||
Sbjct 192759 CACCGCCGTGTCGATCAATCCCTCACGCCCGCCCATGGCGTGGAAGAAGAACTCCTGCGG 192818
Query 302685 TCGT-AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGA 302743
||| || || | | ||||| |||| ||||| || |||| |||||| | ||||
Sbjct 192819 -CGTCAGGCCGCGCAGGTAGGAGTTCTCCACGAATCCGCGCGACTCGGGGCCAAAGTCGT 192877
Query 302744 ACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAA 302803
|||||||||||| ||||| || | | |||| | ||||| ||||| || || |
Sbjct 192878 CCTTGGTAAAGTGGGGCAGAGTGCGCTGGGAGAAGCCAAAGGGGATGCGCTTGCCCTCCA 192937
Query 302804 CGTTCTGCTGTCCCAGGCACGAAATCATCTG 302834
|||||||||| || | ||||| |||||||||
Sbjct 192938 CGTTCTGCTGCCCAACGCACGCAATCATCTG 192968
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471810547234038
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |