Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201
4-08-01] 374 sequences; 22,924,637 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq43 217 2e-50
seq30 147 3e-29
seq99 132 6e-25
seq133 129 7e-24
seq97 129 7e-24
seq88 127 2e-23
seq84 125 9e-23
seq112 111 2e-18
seq90 105 8e-17
seq173 95.1 1e-13
seq299 91.5 2e-12
seq135 87.8 2e-11
>seq43
Length=247289
Score = 217 bits (240), Expect = 2e-50
Identities = 204/260 (78%), Gaps = 0/260 (0%)
Strand=Plus/Plus
Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124
|||||| ||||||||||| |||||||| |||||||| ||||||||||||| |||||||
Sbjct 177561 CTGGTCCACGTAGCGCGCGGTGTCGTTGAAGACGCGCAGCATGGGCACGATGCCGTTGCT 177620
Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184
|||||||||||| | ||||| || | ||| || | |||||| | | |||
Sbjct 177621 GGAGCCGTTGGTGCCGCGGATGTAGGACCCCGTGGCACGGATGTTGTGCATGCTCAGGCC 177680
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244
||||||||| || ||||| |||||| |||||||| || ||||||||||||||||||||
Sbjct 177681 GATGCCGCCCGCGGACTTAGAGATGGCCGCGCACTCCTTCAGCGTGTCGTAGATGCCCTC 177740
Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304
||| ||||||||||||| ||| || ||||| || || || ||| | | |||||
Sbjct 177741 GATGCTGTCGGCCTTCATGGACACTAGGAAGCAGGAGGACAGCTGGGGGCGGGGGGTGCC 177800
Query 1630305 GGCGTTGAAGAGCGTGGGCG 1630324
||||||||| ||||||||||
Sbjct 177801 GGCGTTGAACAGCGTGGGCG 177820
Score = 143 bits (158), Expect = 3e-28
Identities = 322/481 (67%), Gaps = 13/481 (3%)
Strand=Plus/Minus
Query 733083 CCCGAGTTGGGCGACAAACTGTCGTCGCGCCACGGCCAAAAGGGCACCGTGGGCAGCGTG 733142
||| || | ||||||||| | | ||||| ||||| || ||||||||| | |||| |
Sbjct 47892 CCCCAGGTAGGCGACAAATTTGCTTCGCGGCACGGGCAGAAGGGCACCATCGGCATCAC- 47834
Query 733143 CGCTCCACC---GAGGACATGCCCTGGTCGCCGCGCGGCGGCGCCACGCCCGACATCGTG 733199
|| |||| ||||||||||||| || ||||| | ||| | ||||||| | |
Sbjct 47833 --CTACACCCAGGAGGACATGCCCT--TCACCGCGGAG-GGCATCGTGCCCGACCTGATC 47779
Query 733200 ATCAACCCGCACGCCATCCCGTCGCGCATGACCATGGGCAAGATGCTCGAGGCCCTCCTG 733259
||||||||||||||||||||||||||||||||||| || | || | ||||| || ||
Sbjct 47778 ATCAACCCGCACGCCATCCCGTCGCGCATGACCATCGGTCACTTGGTGGAGGCGCTGATG 47719
Query 733260 GGCAAGGTGGCCTGCCGCGAGGGCTACATCGGCGACGGCACGCCCTTTGGCGGCGTCACC 733319
|||||||||| || |||| | ||||||| ||| ||||| || ||| |||
Sbjct 47718 AGCAAGGTGGCGGCGTGCCTGGGCAAGGAGGGCGACGCCACACCCTTCACCGCCGTGACC 47659
Query 733320 NNNNNNNNNNNNNNNNNNGAGTTGGCCCGCCACGGGTGCGAGCGCTACGGCAAGGAGGTG 733379
| | || ||| | | ||| |||| ||||
Sbjct 47658 GTGGAGGACATCTCCACCCTACTCCACGGCTGCGGCTACCAGCAGCGCGGCTGGGAGACC 47599
Query 733380 CTCTACCACCCGCACAC-CGGCGAGCCCATGGCGGCGTTGATCTT-CTCGGCGCCGGTCT 733437
| ||| || |||||| |||| || | |||||||| ||||| ||| | || ||
Sbjct 47598 ATGTACAACGGGCACACGGGGCGCGCGC-TGGCGGCGCCCATCTTCCTCAAC-CCCACCT 47541
Query 733438 ACTACCAGGCCCTCCGGCACGTGGCCATCGACAAGATCCACGCGCGCCCGCGCGGTCCCG 733497
|||||||| ||| |||| ||| ||||||||||||||||||| || || || |
Sbjct 47540 ACTACCAGCGCCTGAAGCACATGGTGGACGACAAGATCCACGCGCGCGGTCGGGGGCCGG 47481
Query 733498 TGCAGATGCTCACCAAGCAGCCGGTCGAGGGCCGCTCGCGCTCGGGCGGCTTCCGTCTCG 733557
| ||||| || || ||||| || ||||||||| ||||| |||||| | || |||
Sbjct 47480 TCCAGATCCTGACGCGCCAGCCCGTGGAGGGCCGCGCGCGCGACGGCGGCCTGCGCTTCG 47421
Query 733558 G 733558
|
Sbjct 47420 G 47420
Score = 140 bits (154), Expect = 4e-27
Identities = 306/452 (68%), Gaps = 25/452 (6%)
Strand=Plus/Plus
Query 1626981 CTGGTCGACGGTAAACTGGATGGCGTCGGCGGCGGGCCTGGTGCGCAGATAGTACATGCC 1627040
|||||| ||||| |||| |||||||||||| |||| | ||||||||| |||||||| ||
Sbjct 174918 CTGGTCCACGGTGAACTTGATGGCGTCGGCCGCGGCGCGGGTGCGCAGGTAGTACATCCC 174977
Query 1627041 GGTCTTGAGGCCGCGGCGCCACGCGTAGGCGTGCATCGACGTGATGCGCTCGGGCGTCGC 1627100
||||| || || ||| |||||| ||| | || |||| || | || |
Sbjct 174978 CGTCTTCAGCCCCTTCTTCCAGGCGTAGAAGTGGAGGGAGGTGA-GCTTGCCAAAGTTGG 175036
Query 1627101 G-TCGGCGCAGTACAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGATCGGCCG 1627159
| || | || || ||||| |||||| ||| |||| || | ||||||| || |
Sbjct 175037 GGTCCGACATGTGCACGTTGAAGGACTGGGACTGATCGATGTACGCGCCGCGATCCGCGG 175096
Query 1627160 CCATGTCGATG---GTGACCCGGTTGGGCACCTCCCACACGGTCTTGAAGATGGCCTTGA 1627216
||||||| | ||| | | ||| | ||||||||| |||||| | | |||||||
Sbjct 175097 CCATGTCCACCAGCGTGCGCTGCTTG---ATCTCCCACACCGTCTTGTACAGCGCCTTGA 175153
Query 1627217 GGTCGGGCGGCACCTCGTCGTCGCCAAAGCCCTGCACCGAGCCGTGCGCCGCGACGAGCC 1627276
| || ||| | | | | |||||||||||| |||| |||| || |||
Sbjct 175154 GCGCG---------TCGGGGATGTCCAGGCCCTGCACCGACCCGTTGCCCGCCACCAGCT 175204
Query 1627277 TGTCGCGAAAGTCGGGCGTCC-ACAGGCC---GCGCGCCATCAGGCGCTTGACCAGGTGG 1627332
|| | |||| ||||| ||||||| ||| | | ||| | | ||||||
Sbjct 175205 CGTTCTTCATGTCGC-CGTCCCACAGGCCCAGGCGGG---TGAGGTCGTGCAGCAGGTGC 175260
Query 1627333 CGGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTGATG 1627392
|||| ||||| || || ||||| || |||||||||||| |||||||||| | |||
Sbjct 175261 TGGTTCACCACCGTGAACTCGCCGGACAGCACGCGGCGCACGTAGATGTTGCTCGTGTAC 175320
Query 1627393 ACCTCGCACGCCTCGGTGTTGCCCAGGATCTG 1627424
|||| | |||| ||||||||||||||||
Sbjct 175321 GGCTCGAAGCACTCGTTGTTGCCCAGGATCTG 175352
Score = 93.3 bits (102), Expect = 5e-13
Identities = 89/114 (78%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 732342 ACGCACGTCGAGGTGCACCCGCTGCTCATGCTCGGGGCCTGCGCGTCCATCATCCCGTTC 732401
|||||| |||| | ||||| | || || |||| ||||| |||||| | || |||
Sbjct 49791 ACGCACTGCGAGATCCACCCCGCCATGATCCTGGGGGTGTGCGCCTCCATCGTGCCCTTC 49732
Query 732402 TCCAACCACAACCAGGCGCCGCGCAACATCTACCAGACGGCCATGGGCAAGCAG 732455
| ||||||| ||| |||||||||||| ||||||| |||||||||||||||||
Sbjct 49731 CCGGACCACAATCAGTCGCCGCGCAACACCTACCAGTCGGCCATGGGCAAGCAG 49678
Score = 87.8 bits (96), Expect = 2e-11
Identities = 62/71 (87%), Gaps = 0/71 (0%)
Strand=Plus/Plus
Query 1628530 AGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGC 1628589
|||||||||| |||||||| ||||| ||||| ||||| |||||||||||||||||||
Sbjct 177490 AGCCAGTCGAAGATGTCGGCATGCCAGGGCTCGAGGTACATGGCAAAGGCGCCCTTGCGC 177549
Query 1628590 TTGCCGCCGCC 1628600
|||||||| ||
Sbjct 177550 TTGCCGCCTCC 177560
>seq30
Length=415379
Score = 147 bits (162), Expect = 3e-29
Identities = 198/273 (73%), Gaps = 2/273 (1%)
Strand=Plus/Minus
Query 1574004 GGCGTCGACGTCGTGCGCAAGATCATCAAGCACCACGCCTCCAAGAGGATCGACCTGCCG 1574063
||| ||||||| ||||||| | |||||| || || || | | ||||||
Sbjct 185080 GGCATCGACGTGGTGCGCACCAAGATCAAGAACTTTGCGCAGCAGCGCGTGAGCCTGCCC 185021
Query 1574064 CCCGGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGT-CGGCGGCCCA 1574122
||||| ||||||||| | | | || ||||||||||||| | ||| ||||| | ||
Sbjct 185020 CCCGGCCGCCACAAGATCGTGGTGCTGGACGAGGCCGACTCGATGACGGGCGGCG-CGCA 184962
Query 1574123 GCAGGCCCTGCGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTG 1574182
|||||||||||| ||||||||| ||||| | ||| |||||||| || ||||| ||
Sbjct 184961 GCAGGCCCTGCGCCGCACCATGGAGGTGCACAGCGCCACCACGCGCTTCGCGCTGGCTTG 184902
Query 1574183 CAACACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGCGCCATTCTGCGCTTTGT 1574242
|||||| || || | | |||||||| || |||| ||||| ||||| | |||||| |
Sbjct 184901 CAACACCTCCTCCAAGATCATCGAGCCCATCCAGAGTCGGTGCGCGGTGGTGCGCTACGC 184842
Query 1574243 GCGCCTGGGTGACGCCCAGATACGCGCGCGCCT 1574275
|||||||| |||||| || | | || |||||
Sbjct 184841 GCGCCTGGCCGACGCCGAGGTCCTGGCCCGCCT 184809
>seq99
Length=333813
Score = 132 bits (146), Expect = 6e-25
Identities = 182/253 (72%), Gaps = 6/253 (2%)
Strand=Plus/Minus
Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239
|| || ||||| ||| | |||||| |||| || || |||||||| || ||||||
Sbjct 93384 CCCTCATCGCGGGAGATGAGCTCGTTGGAGAAGGTCAGCCCCGGCATGAGCCCCCGCTTC 93325
Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299
|| | ||| |||||| |||||| ||| ||||| || |||||||| ||| |||||||
Sbjct 93324 TTCACCCAGTAGATGGAGCAGAAGGAGCCGGAGAAGAATATGCCCTCCACGCAGGCAAAG 93265
Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAG 869359
||| || |||||||| || || || ||| ||||||||||| |||||||
Sbjct 93264 GCGACCAGGCGCTCGGCGAATCGCTCT--GCGCTCGA----GATCCACTTCAGCGCCCAG 93211
Query 869360 TCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTCG 869419
|||||||| ||| | ||| || ||||| ||| ||||| | || || |||||| |
Sbjct 93210 TCGGCCTTCTTCTTGACCACTGGTACCGTCTCGGTGGCGTGGAACAGCATGTCCTTCTGC 93151
Query 869420 GCCGGGTCCTTGA 869432
|||||||||||
Sbjct 93150 CGCGGGTCCTTGA 93138
Score = 104 bits (114), Expect = 3e-16
Identities = 151/212 (71%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| ||||| | | | ||| ||||||||||||||||||||||| || |
Sbjct 246221 GCTTGGCCAGCTCGCCAGGTAGCACCAGCCGCACGGCGGTCTGGATCTCGCG---GCTGG 246277
Query 1254403 TCGTGTTGCGCTT---GTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGA 1254459
|| | || |||| |||| | | | || || |||||| ||| |||| |||||
Sbjct 246278 TCAAGGTGGGCTTCTTGTTCACGCGGGACAACTGGGCGGCCTGGGTAGCGATCTTGTCGA 246337
Query 1254460 TCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGG 1254519
| ||| || |||||||||| || | || | |||| ||| ||||| |||||
Sbjct 246338 ACTGGTCCACGATGAACGAGTTCAGGATGGTGATGGCCTTGGAGGAAATGCCGGTGTCGG 246397
Query 1254520 GGTGCACCTGCTTGAGCACCTTGTAGATGAAC 1254551
|||| ||||||||||| |||||| ||||| ||
Sbjct 246398 GGTGGACCTGCTTGAGGACCTTGAAGATGTAC 246429
>seq133
Length=726431
Score = 129 bits (142), Expect = 7e-24
Identities = 152/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||| || |||||| ||| | ||||||||||||||||||||||||||| || |
Sbjct 411 GCTTGGCAAGCTCGCCGGGCAGCACCAGGCGCACGGCGGTCTGGATCTCGCGGCTGGTCA 470
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
|||| ||||||| | | | ||| || ||||| |||| |||| ||||| |
Sbjct 471 GCGTGGGCTTCTTGTTCACGCGGGACAGCTGGGAGGCCTGGGTGGCGATCTTGTCGAACT 530
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||| || |||||||||| || | || | |||| ||||||||| ||||||||
Sbjct 531 GGTCCACGATGAACGAGTTCAGGATGGTGATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 590
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548
| |||||||||||||||||| |||||
Sbjct 591 GGACCTGCTTGAGCACCTTGAAGATG 616
>seq97
Length=1144356
Score = 129 bits (142), Expect = 7e-24
Identities = 152/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||| || |||||| ||| | ||||||||||||||||||||||||||| || |
Sbjct 306507 GCTTGGCAAGCTCGCCGGGCAGCACCAGGCGCACGGCGGTCTGGATCTCGCGGCTGGTCA 306448
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
|||| ||||||| | | | ||| || ||||| |||| |||| ||||| |
Sbjct 306447 GCGTGGGCTTCTTGTTCACGCGGGACAGCTGGGAGGCCTGGGTGGCGATCTTGTCGAACT 306388
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||| || |||||||||| || | || | |||| ||||||||| ||||||||
Sbjct 306387 GGTCCACGATGAACGAGTTCAGGATGGTGATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 306328
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548
| |||||||||||||||||| |||||
Sbjct 306327 GGACCTGCTTGAGCACCTTGAAGATG 306302
Score = 95.1 bits (104), Expect = 1e-13
Identities = 236/353 (67%), Gaps = 8/353 (2%)
Strand=Plus/Plus
Query 1349469 GCCCATCGTGCACCGCGACCTCAAGAGCGGCAACCTGCTGGTCGACCAAAACTACAACGT 1349528
|| |||||||||||||||||| ||| || |||||||||| | ||| | | ||
Sbjct 728412 GCGCATCGTGCACCGCGACCTGAAGGCCGCCAACCTGCTGCTGGACGAGACGGGGGTGGT 728471
Query 1349529 CAAGGTGGCCGACTTTGGCCTGGCGCGCATTAAGGAGGACAACGCCACGATGACC-CGCT 1349587
||| | || ||||||||| |||| ||| | ||| ||| | | |||||| ||
Sbjct 728472 GAAGATCGCGGACTTTGGCGTGGCCCGCGTGCTGGACCACACGGGCGTCATGACCGCGGA 728531
Query 1349588 G--CGGCACGCCCTGCTGGACGGCGCCCGAGGTCATACGCG-GCGAGCGCTACGACGAGC 1349644
| || ||| | |||||| |||||| ||||| || || | | ||| ||||| || |
Sbjct 728532 GACGGGGACGTACCGCTGGATGGCGCCAGAGGTGAT-CGAGCACCAGCCCTACGGCGTGG 728590
Query 1349645 GGGCCGACGTCTACTCATTTGGCATCATCGCGTGGGAGGTGCTCACGCGCCGCCGCCCCT 1349704
|||||| |||| ||| ||||||||| | ||||| |||| ||| | ||| ||||
Sbjct 728591 AGGCCGATGTCTTCTCCTTTGGCATCGTGCTCTGGGAACTGCTGACGGGGCGCGTGCCCT 728650
Query 1349705 ACGACGGCCT---CAATTTCATGAACGTGAGCCTCGACGTCATGGAGGGCAGGCGCCCGC 1349761
||| || | | | || | || | | || | ||||| ||||||||
Sbjct 728651 ACGCCGACATGACCCCGCTCCAGGCCGCGGTGGGGGTGGTGCAGAAGGGCCTGCGCCCGC 728710
Query 1349762 CGCTTCCCGGCGACTGCCCGACCGCGCTGGCCGACCTCATCCAGGCCTGCTGG 1349814
|||| || | ||||||| |||||||||| || ||| | |||||||||
Sbjct 728711 CGCTGCCGCTCAACTGCCCCCCCGCGCTGGCGGAGACCATGCGCGCCTGCTGG 728763
>seq88
Length=544131
Score = 127 bits (140), Expect = 2e-23
Identities = 374/568 (66%), Gaps = 42/568 (7%)
Strand=Plus/Minus
Query 733006 CGGTGCACCGCGTGGTGGTGACGCGCAACGGCGACGGCGCCAACGCCGTCAAGATCGTGA 733065
||||| |||||||| ||||||| |||||| |||| ||| || |||||| | ||
Sbjct 449513 CGGTGGACCGCGTGATGGTGACCAGCAACGACGACTCGGCCTGCGTGGTCAAGGTGCTGG 449454
Query 733066 CGCGCGCCATGCGCCAGCCCGAGTTGGGCGACAAACTGTCGTCGCGCCACGGCCAAAAGG 733125
||| || || | |||||| |||||||||| | || || ||||||||||| ||||
Sbjct 449453 TGCGGCACACACGGCGCCCCGAGCTGGGCGACAAGTTCTCCTCTCGCCACGGCCAGAAGG 449394
Query 733126 GCACCGT---GGGCAGCGTGCGCTCCACCGAG---GACATGCCCTGGTCGCCGCGCGGCG 733179
|| || | ||| ||||| ||||| ||| | |||| || ||| || |||
Sbjct 449393 GCGTGGTTGGGTGCATCGTGC------CCGAGGCCGACCTCCCCT--TCTCCGAGC-GCG 449343
Query 733180 GCGCCACGCCCGACATCGTGATCAACCCGCACGCCATCCCGTCGCGCATGACCATGGGCA 733239
| | ||||||| | | || |||||||||| | |||| || |||||||| ||||||
Sbjct 449342 GGGTGGTGCCCGACCTGATCATGAACCCGCACGGCTTCCCCTCCCGCATGACTGTGGGCA 449283
Query 733240 AGATGCTCGAGGCCCTCCTGGG---CAAGGTGGCCTGCCGCG-AGGGCTACATCGGCGAC 733295
||||| ||||| || ||||| ||||| || || | | ||| | | | ||
Sbjct 449282 AGATGATCGAG---CTGCTGGGGTCCAAGGCGG-GGGCGGTGTCCGGCCGCCTGCACTAC 449227
Query 733296 GGCACGCCCTTTGGCGGCGTCACCNNNNNNNNNNNNNNNNNNGA---GTTGGCC-CGCCA 733351
||||| ||||||||| | || | || | || || ||
Sbjct 449226 GGCACCGCCTTTGGCGAGGGCAGCGGGCTGGCGGACCGTGTGGACGCGCTGTCCGCGGAG 449167
Query 733352 CGGGTGCGAGCG--------CTAC---GGCAAGGAGGTGCTCTACCACCCGCA-CACCGG 733399
| |||| ||| |||| |||||||| ||||| | | || ||| ||| ||
Sbjct 449166 CTGGTGGCGGCGGGGTTCTCCTACTCGGGCAAGGACCTGCTCCA-CTCCGGCATCACGGG 449108
Query 733400 CGAGCCCATGGCGGCGTTGATCTTCTCGGCGCCGGTCTACTACCAGGCCCTCCGGCACGT 733459
||| | ||| ||| | ||||| || ||| || ||||||||| | |||| |
Sbjct 449107 GGAGGCGCTGGAGGCATACGTCTTCATGGGGCCCGTGTACTACCAGAAGTTGAAGCACAT 449048
Query 733460 GGCCATCGACAAGATCCACGCGCGCCCGCGCGGTCC-CGTGCAGATGCTCACCAAGCAGC 733518
|| || |||||||| ||||||||| |||| || || || | | ||||||||| |||||
Sbjct 449047 GGTGATGGACAAGATGCACGCGCGCGCGCGAGGGCCGCGCGTCG-TGCTCACCAGGCAGC 448989
Query 733519 CGGTCGAGGGCCGCTCGCGCTCGGGCGG 733546
| ||||||||| |||||| |||||
Sbjct 448988 CCACCGAGGGCCGATCGCGCGACGGCGG 448961
>seq84
Length=279745
Score = 125 bits (138), Expect = 9e-23
Identities = 174/244 (71%), Gaps = 0/244 (0%)
Strand=Plus/Minus
Query 507703 CACCATGCGATTCAACCTGGCCGTCACGGGCACCTACAACGCCGACTTTGACGGCGACGA 507762
|||| | || | |||||| ||| || || ||||||||||||||||||||||||||||
Sbjct 194316 CACCTTCCGCCTGAACCTGAGCGTGACCAGCCCCTACAACGCCGACTTTGACGGCGACGA 194257
Query 507763 GATGAACCTGCACGTGCCCCAGTCCGAGACGGCGCGCGCCGAGGTGACGCACACCATGAG 507822
||||||| ||||| || ||| | | || || |||||| | | | | | ||||
Sbjct 194256 GATGAACATGCACATGGTTCAGAGCCATGAGGTCCGGGCCGAGATCAAGGAGATCATGGC 194197
Query 507823 CGTGTCGCTCAAGACCGTGTCGCCGCAGGCCAACAAGCCCATCATCGGCCTGGTCATGGA 507882
||| |||| || | |||||| || ||||||||| ||| |||| ||| | ||| |||
Sbjct 194196 GGTGCCGCTGAACATCGTGTCCCCCCAGGCCAACCGCCCCGTCATGGGCATCGTCCAGGA 194137
Query 507883 CGCCCTCGTCGGCTGCGGCTTCCTCACGACCAACGACACCTTTATGGACCGCGGCGTGCT 507942
| | || | |||| || | |||| | ||||||||| |||| |||| | ||||
Sbjct 194136 CTCGCTGCTGGGCTCGCGCCTGTTCACCAAGCGCGACACCTTCCTGGAGCGCGACCTGCT 194077
Query 507943 CATG 507946
||||
Sbjct 194076 CATG 194073
Score = 87.8 bits (96), Expect = 2e-11
Identities = 213/314 (68%), Gaps = 14/314 (4%)
Strand=Plus/Minus
Query 512000 GTGCTGGGCATCGAGGCCGCCGTGGCCGTGCTCTTTTCC--GAGATCAAGGCCGTCATCT 512057
||||||||||||||||| || || ||| || || ||| | | ||| |||
Sbjct 190395 GTGCTGGGCATCGAGGCGGCGC--GCAATGCGCTGCTCAAGGAGTTGCGCGGCGTGATCG 190338
Query 512058 CCTTTGACGGCACCTACGTCAACGACCGCCACTTTGCGCTGGC-CACCGACACCATGTGC 512116
|| |||||| ||||||||||| |||||||| || ||| | ||| |||||
Sbjct 190337 AGTTCGACGGCTCCTACGTCAACTACCGCCAC-CTGAGCTCCCTGGTGGACTCCATGACG 190279
Query 512117 TGCCGCGGATCGGTGGTGGCCGTCACGCGCCACGGCTTCAACCGCGCCGACCACGGCTTC 512176
| ||||| | | ||||| ||||||| |||||| ||||||||| ||| ||| |
Sbjct 190278 CGGCGCGGCTACTTCATGGCCATCACGCGGCACGGCATCAACCGCGACGAAACCGGGCCC 190219
Query 512177 CTGTCGCGGGCCTCTTTCGAAGAGACCGTCGACATCCTCTTTGACGCGGCGGCCTTTGCC 512236
|| | |||||| ||||| ||||| || || ||||| | ||| ||||| | ||
Sbjct 190218 CTTCACCAGGCCTCCTTCGAGGAGACGGTGGAGATCCTGTGCCGCGCCGCGGCGTACGCG 190159
Query 512237 GAGACCGACAAGATCACCGACGGCTCGGTGACCGAGCCCATCATCCTGGGCCAG-ACGGC 512295
||| ||||| | || | ||| ||| | ||| |||||| ||||||||| | ||
Sbjct 190158 GAGGCCGACGACAT----GGCGG--GCGTGTCGGAGAACATCATGCTGGGCCAGCTCTGC 190105
Query 512296 GCCCATCGGCACGG 512309
||| | |||||||
Sbjct 190104 -CCCGTGGGCACGG 190092
Score = 87.8 bits (96), Expect = 2e-11
Identities = 126/178 (71%), Gaps = 0/178 (0%)
Strand=Plus/Minus
Query 509036 CCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGATG 509095
|||||| ||||| || ||| ||||| ||| ||||||||| | ||| ||| |
Sbjct 192866 CCCGAGTCGCGCGGATTCGTGGAGAACTCCTACCTGCGCGGCCTGACGCCGCAGGAGTTC 192807
Query 509096 TTTCTGCACATGATCGGCGGGCGCGAGGGCCTCGTCGACACGGCCGTCAAGACGGCCGAG 509155
|| | ||| || |||||||| ||||| | |||||||||| || ||||| |||
Sbjct 192806 TTCTTCCACGCCATGGGCGGGCGTGAGGGATTGATCGACACGGCGGTGAAGACCGCCAGC 192747
Query 509156 ACGGGCTACATCCAGCGCCGGTGCATCAAGTCGATGGAGAGCCTGCAGATCAAGCGCG 509213
|||||||||||||||||||| | ||| | |||||| |||| | ||| | |||
Sbjct 192746 ACGGGCTACATCCAGCGCCGCCTGGTGAAGGCCATGGAGGACCTGATGGTCAGGTGCG 192689
Score = 87.8 bits (96), Expect = 2e-11
Identities = 119/166 (72%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 507105 AGCGGTTCAAGGGCAAGGAGGGTAGGATCCGCGGCAATTGCATGGGCAAGCGCGTCAACT 507164
||||| | ||||| |||||||| | | |||||||| ||||||||||||||| |||
Sbjct 195263 AGCGGCTGAAGGGGAAGGAGGGGCGCCTGCGCGGCAACCTGATGGGCAAGCGCGTCGACT 195204
Query 507165 TTACCGCGCGCGCCGTCATCAGCCCCGACCCCGAGATCGACATTGACGAGGTGGGCGTGC 507224
| | || ||| ||||||||| |||||| | ||| | |||||| |||||||||
Sbjct 195203 TCTCGGCCCGCACCGTCATCACGGGGGACCCCAACCTCGCGCTGGACGAGCTGGGCGTGC 195144
Query 507225 CCTATGAGATCGTCAAGACGCTCACCTTTCCCGAGCGCGTGACGCC 507270
||| | |||| ||| || | ||| || ||| | || |||||
Sbjct 195143 CCTGGGGCATCGCGCTGACCCTGAACTTCCCGGAGAGTGTCACGCC 195098
>seq112
Length=154816
Score = 111 bits (122), Expect = 2e-18
Identities = 189/275 (69%), Gaps = 12/275 (4%)
Strand=Plus/Plus
Query 1178230 CGGCGTGGCCTATTTGCACGGGCGCGACCGGCCGATCGTGCACCGCGACCTCAAGTCGTC 1178289
|||| ||||| ||||| ||| || |||| | |||||| |||||||||||| |
Sbjct 104043 CGGCATGGCCAGCCTGCACTCCCGCCCCCAGCCGCTGCTGCACCTGGACCTCAAGTCGCC 104102
Query 1178290 CAACCTGCTCGTCGACGACAACTTCACAATCAAGGTGGCCGACTTTGGCTTTGCCCGCAT 1178349
|||| | || | |||||||| | | ||| | |||||||| ||| | |||||| |
Sbjct 104103 CAACATCCTGCTGGACGACAAGTGGCGCGTGAAGATTGCCGACTTCGGCCTGGCCCGCCT 104162
Query 1178350 CCGCGAGGACAATGCGACGATGACGCGGTGCG---------GCACGCCGGCGTGGACGGC 1178400
| ||| | ||| |||| | | ||| ||||||| | ||||| |||
Sbjct 104163 CA---AGGTACACGCGCATGTGACCCCGGGCGCGCCCTCGGGCACGCCCGAGTGGATGGC 104219
Query 1178401 GCCCGAGGTCCTGCGCGGCGAGCGCTACTCGGAAAAGGCCGACGTCTACTCGTTTGGCGT 1178460
|||||||||||||||| ||||| |||| |||| |||||||| ||| | |||||
Sbjct 104220 GCCCGAGGTCCTGCGCTCCGAGCCCTACGCGGAGGGCGCCGACGTGTACAGCTACGGCGT 104279
Query 1178461 CGTCATGTGGGAGATCATCACGCGCAAGCAGCCCT 1178495
|| |||||||||| | ||| | |||||||||
Sbjct 104280 GGTGCTGTGGGAGATGCTGACGGGGCAGCAGCCCT 104314
Score = 91.5 bits (100), Expect = 2e-12
Identities = 165/237 (70%), Gaps = 21/237 (9%)
Strand=Plus/Plus
Query 1848305 CACCGCGACCTCAAGTCACTCAACCTGCTGCTCGACGCCAAGTGGAACGTCAAGGTCTCG 1848364
|||| ||||||||||| | |||| | ||||| |||| ||||||| ||| ||| | |
Sbjct 104083 CACCTGGACCTCAAGTCGCCCAACATCCTGCTGGACGACAAGTGGCGCGTGAAGATTGCC 104142
Query 1848365 GACTTTGGCCTCACCCGGTTCAAGGCCGACCTGGCGCGCGGTGGCAGCGGCAGCGACGTC 1848424
||||| ||||| |||| |||||| || |||| ||| | ||| ||| | ||
Sbjct 104143 GACTTCGGCCTGGCCCGCCTCAAGGTACAC---GCGC-ATGTGACCCCGGGCGCGCCCTC 104198
Query 1848425 GTGCAGGGCACCGTCCAGTGGCTGGCGCCCGAGGTCCTGGACGAGAGCGCCGACGTCGAC 1848484
|||||| | ||||| |||||||||||||||| | || |||| | | |
Sbjct 104199 -----GGGCACGCCCGAGTGGATGGCGCCCGAGGTCCT------GCGCTCCGA-GCC--C 104244
Query 1848485 TACATGCAG---GCCGACGTCTACGCCTTTGGCGTCGTGCTCTGGGAGATGCTCACG 1848538
||| | || |||||||| ||| || ||||| ||||| ||||||||||| |||
Sbjct 104245 TACGCGGAGGGCGCCGACGTGTACAGCTACGGCGTGGTGCTGTGGGAGATGCTGACG 104301
>seq90
Length=671320
Score = 105 bits (116), Expect = 8e-17
Identities = 122/163 (75%), Gaps = 6/163 (4%)
Strand=Plus/Minus
Query 869210 AAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCC 869269
|||| |||||||||||||||| |||||||||||||| ||||||| || || |||
Sbjct 288452 AAGGTGAGGCCGGGCATGAGGTGCCGCTTCTTGAGCCAGTAGATGGCACAAAAGGAGCCG 288393
Query 869270 GAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGG 869329
||||| | ||||||||| ||| ||||||| | | ||||||| || ||| || |
Sbjct 288392 GAGAAGAGGATGCCCTCCACGCAGGCAAAGGCCACCAGCCGCTGCGCGAAGCTG----GA 288337
Query 869330 CCCTCCTTGTTGATCCACTTCATCGCCCAGTCGGCCTTTTTCC 869372
||| | || ||||||| | | ||||| || ||||||||||
Sbjct 288336 CCCGC--TGCCGATCCACCTGAGGGCCCACTCCGCCTTTTTCC 288296
Score = 87.8 bits (96), Expect = 2e-11
Identities = 131/185 (71%), Gaps = 1/185 (1%)
Strand=Plus/Minus
Query 869694 CCTCCTT-CATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752
|| |||| |||||| || | | ||||||||| |||||| |||||| ||| || ||
Sbjct 287504 CCACCTTGCATGAAGCGTGCAGATAGGTTCTCGAGCACGATACCGTCGGAGGCCGCAAAG 287445
Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACG 869812
|| || || | || ||| |||||||||||||||||| | || |||||| |
Sbjct 287444 AAGGCGAGAATGTAGGAGATGAAGTGGCGCTCGTCGTCGGTCAGTCGCACCCAATCCCGC 287385
Query 869813 GTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTAC 869872
|||||||| |||||||||||||| | |||||| ||| | ||||| |||||
Sbjct 287384 ATGTCGGCGGATAGGTCCACCTCCTCCACAGTCCAGTAGCTGGCTTGGGCCTGCTTGTAG 287325
Query 869873 ATCTC 869877
| |||
Sbjct 287324 AACTC 287320
>seq173
Length=275558
Score = 95.1 bits (104), Expect = 1e-13
Identities = 174/249 (70%), Gaps = 11/249 (4%)
Strand=Plus/Plus
Query 1176385 CATCGTGCACCGCGACGTCAAGTCGCTCAACCTGCTGCTCGACAACAAGTGGAACGTCAA 1176444
|||||||||||||||| ||||||||| |||||||||| | ||| | | ||| ||||||
Sbjct 173547 CATCGTGCACCGCGACCTCAAGTCGCCCAACCTGCTGGTGGACCGCCACTGGCGCGTCAA 173606
Query 1176445 GGTCTCGGACTTTGGCCTGACCAAGTTTCGCGCCGACCTGGCCGACGGCG-CGGGCACGG 1176503
| |||| ||||| |||| ||||| | | | | | ||| ||| | | |||
Sbjct 173607 GATCTCCGACTTCAACCTGTCCAAGCTGCTGGATGGC--AGCC--CGGTGATGAGCAGCC 173662
Query 1176504 CGCCCATCGGCAGCGTGCACTGGATGGCGCCCGAGGTCCTGGACGAGTCGCTCGACGTCG 1176563
| || | || | || |||| ||||||| ||| |||||| || | || || || |
Sbjct 173663 TGGCCGCCACCAACCCGCGCTGGCTGGCGCCGGAGATCCTGG-CGGG--GCACGCCGCCA 173719
Query 1176564 ACTATGCGATGGCCGACGTCTACTCGTTTGGCATCATCCTCTGGGAGGTGCTCACGCGCG 1176623
|| || ||||||||||| | ||||||||| | || |||||| |||| || | |
Sbjct 173720 CCTTCGC---CTCCGACGTCTACGCCTTTGGCATCGTGCTGTGGGAGATGCTGACCTGGG 173776
Query 1176624 AGCAGCCCT 1176632
||| |||||
Sbjct 173777 AGCTGCCCT 173785
>seq299
Length=256364
Score = 91.5 bits (100), Expect = 2e-12
Identities = 209/308 (68%), Gaps = 14/308 (5%)
Strand=Plus/Plus
Query 18185 AGTTGGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGCCCGATC 18244
|| |||| ||||| || || |||||| || | |||| || ||||| ||| |||
Sbjct 77771 AGCTGGACCGGCGGCGCCCAGGCCAGAGCCGGATCACCACCCCCCGCAAGGAGAGCGACA 77830
Query 18245 GCGTCATCATCCAGTCGGGCACGGA----GAACGGCCT--CACGCTCGGCTCGCCCGTCG 18298
|| |||| ||||||| || || |||| |||||| ||| ||||| ||
Sbjct 77831 CCGCGGAGATCCTGTCGGGCCTGGCCGCCGACCGGCAGACCACGCTGGGCACGCCCATCT 77890
Query 18299 GCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTATTCCGACATGTGCAAGGTGC 18358
|| | | ||| |||| |||||||| ||| |||||| | || ||| | | ||
Sbjct 77891 GCGTGCTGGTGCGCAACGCGGACCAGCGCTCCGGGGACTATGCGGAGATGG--AGGCGGC 77948
Query 18359 CG-CGGCCCTCAC-ACGCCGACTACACCTACATGGCCAAGTACGGCATCAAGGCGTCGT- 18415
| | ||||| | |||||||| ||||||| ||||||||||||| ||| |||
Sbjct 77949 CTACCGCCCTAGCCACGCCGACGCCACCTACGACTTCAAGTACGGCATC--CGCGCCGTG 78006
Query 18416 -CGGGCGGAGGCCGGTCGTCTGCCCGCGAGACCCTCATGCGCGTCGCCGCCGGCGCGGTC 18474
| || || |||||||| ||||| ||||||||| || ||| || || || || || ||
Sbjct 78007 GCAGGGGGCGGCCGGTCCTCTGCGCGCGAGACCATCGGGCGTGTGGCAGCTGGGGCCATC 78066
Query 18475 GCCGAGAA 18482
||| ||||
Sbjct 78067 GCCAAGAA 78074
>seq135
Length=367852
Score = 87.8 bits (96), Expect = 2e-11
Identities = 84/108 (78%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|| ||||||||| | |||||||||| || || || || ||| | | || ||||||
Sbjct 166404 GCTGCCAACTACTTGAACATCAAGCCCCTCCTGGACCTGACATGCTTGACGGTCGCCAAC 166345
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATC 1592293
|||||||||||||||||||| ||||| ||||| || ||| ||||||
Sbjct 166344 ATGATCAAGGGCAAGTCGCCAGAGGAAATCCGGCAGCACTTCAACATC 166297
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107108507808558
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |